[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : dnaJ2
DDBJ      :dnaJ2        putative heat shock protein
Swiss-Prot:DNAJ1_NOCFA  RecName: Full=Chaperone protein dnaJ 1;

Homologs  Archaea  26/68 : Bacteria  910/915 : Eukaryota  197/199 : Viruses  2/175   --->[See Alignment]
a.2.3a.4.5b.4.1g.54.1
:384 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->69 1hdjA PDBj 9e-19 55.1 %
:BLT:PDB   133->210 1exkA PDBj 8e-17 48.6 %
:BLT:PDB   229->344 1c3gA PDBj 2e-08 29.3 %
:RPS:PDB   3->69 2ej7A PDBj 2e-20 56.7 %
:RPS:PDB   133->379 1cmwA PDBj 5e-35 10.5 %
:RPS:SCOP  3->68 2nraC1  a.4.5.10 * 1e-22 17.2 %
:RPS:SCOP  133->210 1exkA  g.54.1.1 * 5e-15 48.6 %
:RPS:SCOP  187->259 1nltA1  b.4.1.1 * 1e-05 11.0 %
:RPS:SCOP  262->348 1c3gA2  b.4.1.1 * 9e-23 31.0 %
:HMM:SCOP  2->110 1gh6A_ a.2.3.1 * 7.9e-28 46.2 %
:HMM:SCOP  133->215 1exkA_ g.54.1.1 * 6.4e-17 46.8 %
:HMM:SCOP  261->349 1c3gA2 b.4.1.1 * 1.1e-21 40.4 %
:RPS:PFM   4->61 PF00226 * DnaJ 2e-18 67.2 %
:RPS:PFM   133->210 PF00684 * DnaJ_CXXCXGXG 1e-14 44.9 %
:RPS:PFM   249->340 PF01556 * DnaJ_C 5e-15 42.4 %
:HMM:PFM   248->346 PF01556 * DnaJ_C 1.4e-31 39.4 99/101  
:HMM:PFM   4->65 PF00226 * DnaJ 4.3e-29 61.3 62/64  
:HMM:PFM   133->210 PF00684 * DnaJ_CXXCXGXG 2.4e-20 34.6 78/79  
:BLT:SWISS 1->384 DNAJ1_NOCFA 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56271.1 GT:GENE dnaJ2 GT:PRODUCT putative heat shock protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1603575..1604729 GB:FROM 1603575 GB:TO 1604729 GB:DIRECTION + GB:GENE dnaJ2 GB:PRODUCT putative heat shock protein GB:PROTEIN_ID BAD56271.1 LENGTH 384 SQ:AASEQ MARDYYGLLGVARNATDQEIKRAYRKLARELHPDVNPDEAAQARFKEVSTAYEVLSDPEKRRIVDMGGDPLESGGGAGGFSGAGFGGLGDVFEAFFGGMSGAGGGQRKPRGRVQPGADSLLRTRLSLAECAVGVTKHLTVDTAVLCDACHGSGTHGNSKPVRCETCGGAGEVQSVQRSFLGQVLTSRPCPTCRGAGETIPDPCHKCGGDGRVRARREIAAPIPAGVANGMRVRLAAQGEVGPGGGPPGDLYVEIVEQPHDVFVRDGDDLHCTIRVPMVDAALGTTVVIDTILDGPTELTIPPGTQPGEVSVLRGHGMPKLRSGVRGDLLAHLDIVIPTKLDGKQTELLRKYKALRDRDRAEVMSAQSEHNSGLFARLRASFSGR GT:EXON 1|1-384:0| SW:ID DNAJ1_NOCFA SW:DE RecName: Full=Chaperone protein dnaJ 1; SW:GN Name=dnaJ1; OrderedLocusNames=NFA_14260; SW:KW Chaperone; Complete proteome; Cytoplasm; DNA replication;Metal-binding; Repeat; Stress response; Zinc; Zinc-finger. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->384|DNAJ1_NOCFA|0.0|100.0|384/384| GO:SWS:NREP 4 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006260|"GO:DNA replication"|DNA replication| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0006950|"GO:response to stress"|Stress response| SEG 73->87|sgggaggfsgagfgg| SEG 94->105|affggmsgaggg| SEG 211->224|rvrarreiaapipa| SEG 241->248|gpgggppg| BL:PDB:NREP 3 BL:PDB:REP 1->69|1hdjA|9e-19|55.1|69/77| BL:PDB:REP 133->210|1exkA|8e-17|48.6|74/79| BL:PDB:REP 229->344|1c3gA|2e-08|29.3|116/170| RP:PDB:NREP 2 RP:PDB:REP 3->69|2ej7A|2e-20|56.7|67/82| RP:PDB:REP 133->379|1cmwA|5e-35|10.5|229/817| RP:PFM:NREP 3 RP:PFM:REP 4->61|PF00226|2e-18|67.2|58/63|DnaJ| RP:PFM:REP 133->210|PF00684|1e-14|44.9|78/78|DnaJ_CXXCXGXG| RP:PFM:REP 249->340|PF01556|5e-15|42.4|92/95|DnaJ_C| HM:PFM:NREP 3 HM:PFM:REP 248->346|PF01556|1.4e-31|39.4|99/101|DnaJ_C| HM:PFM:REP 4->65|PF00226|4.3e-29|61.3|62/64|DnaJ| HM:PFM:REP 133->210|PF00684|2.4e-20|34.6|78/79|DnaJ_CXXCXGXG| GO:PFM:NREP 6 GO:PFM GO:0031072|"GO:heat shock protein binding"|PF00226|IPR001623| GO:PFM GO:0006457|"GO:protein folding"|PF00684|IPR001305| GO:PFM GO:0031072|"GO:heat shock protein binding"|PF00684|IPR001305| GO:PFM GO:0051082|"GO:unfolded protein binding"|PF00684|IPR001305| GO:PFM GO:0006457|"GO:protein folding"|PF01556|IPR002939| GO:PFM GO:0051082|"GO:unfolded protein binding"|PF01556|IPR002939| RP:SCP:NREP 4 RP:SCP:REP 3->68|2nraC1|1e-22|17.2|64/135|a.4.5.10| RP:SCP:REP 133->210|1exkA|5e-15|48.6|74/79|g.54.1.1| RP:SCP:REP 187->259|1nltA1|1e-05|11.0|65/74|b.4.1.1| RP:SCP:REP 262->348|1c3gA2|9e-23|31.0|87/90|b.4.1.1| HM:SCP:REP 2->110|1gh6A_|7.9e-28|46.2|106/0|a.2.3.1|1/1|Chaperone J-domain| HM:SCP:REP 133->215|1exkA_|6.4e-17|46.8|79/79|g.54.1.1|1/1|DnaJ/Hsp40 cysteine-rich domain| HM:SCP:REP 261->349|1c3gA2|1.1e-21|40.4|89/90|b.4.1.1|2/2|HSP40/DnaJ peptide-binding domain| OP:NHOMO 4776 OP:NHOMOORG 1135 OP:PATTERN ------------------------11111111111--------2212211111--------111--21 2222322222222222222-22222222222222222253233322222222222232222222332322222222223232222222222212111112321223423211111111111111111111111121333332222243634454444323223433244551313211313312212211221111111111111111111111111111111221111112111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111112111111111111111111111221131222212212111111113222222422221233232212222222222222222124223232222153323333333322222112111111122222222222222341111111111111111111111111111112233221222211112111111133111111113131222221211222223213342112112222222222414232232222222222222323222222223542212222222222222222222222221111212121311111122111111111111-1321211111121111112222222222-22222222222222222222221111222222222222222222222222211211111111111111122222222222222111121111-11111222221222221111122221222213332222222223222111111111112222222222222211211111111111111121111111-11111421111112111111111111111221 FA57DDD-lJF489E9BBB9CBDC99ABB9AABABBAA9A7AAA9A99A99999A978AA9B89977947AA998996A89A8A697A-9HBBAAAB56A89BHGG2Ab9TckXTXJFDB9GNCgRBUA**S1XQXBE9Eb9HZMADEDBMCEeDLKMKAFIFGDDAXHJWEFMB9JGG*D97IDcYctCjQGFLKNJN --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1- STR:NPRED 377 STR:RPRED 98.2 SQ:SECSTR ccccHHHHTTccTTccHHHHHHHHHHHHTTccTTTccTHHHHHHHHHHHHHHHHHccTTHHHHHHHTccHcGGGHHHHHHHHHcTT##cccEEEEEcTTccEEEccccccccHHHcccccccccccccccccccccccccccccHHHHTTTTTTTTTTTccHHHHHHHHHHHEEEEHHHHHHHTccTTTcccTTTcccccEEEcccccccccEEEcccGGGccTTcHHHHHHHHTccccTTEEEEEEEETTHHHHHHHHHHTcHHHHHHHHHTccHHHHHHHHHHTcEEcccccEEEEcGGGccHHTcEHHHHHHHHHHHTTccccHHHHHHHccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHTcccccccccccc##### DISOP:02AL 98-120, 147-176, 351-373| PSIPRED cccccHHHccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccHHHHHHHHccccccccccccccccccccccccccHHHHHccccccccccccccccccccccEEEEEEEcHHHcccccEEEEEEcccEEcccccccccccccccEEEcccccccEEEEEEcccEEEEEEEEEcccccccccEEEcccccccccEEEEEEEEEEEEEccccccccEEEEEccccccccccccccEEEEEEEEcccccEEcccEEEEEEEccHHHHHcccEEEEEEccccEEEEEEcccccccEEEEEcccccccccccccccEEEEEEEEEcccccHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHccc //