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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadA2
DDBJ      :fadA2        putative acyl-CoA thiolase
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  631/915 : Eukaryota  193/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->392 1ulqC PDBj 7e-78 44.2 %
:RPS:PDB   17->394 1dluA PDBj 1e-72 38.7 %
:RPS:SCOP  14->268 1afwA1  c.95.1.1 * 2e-60 31.3 %
:RPS:SCOP  253->392 1bi5A2  c.95.1.2 * 5e-28 14.8 %
:HMM:SCOP  15->270 1qflA1 c.95.1.1 * 3.4e-65 43.1 %
:HMM:SCOP  272->394 1ulqA2 c.95.1.1 * 1.9e-44 56.9 %
:RPS:PFM   14->263 PF00108 * Thiolase_N 4e-41 48.1 %
:RPS:PFM   271->392 PF02803 * Thiolase_C 8e-30 59.8 %
:HMM:PFM   14->263 PF00108 * Thiolase_N 1.3e-60 41.5 248/264  
:HMM:PFM   271->393 PF02803 * Thiolase_C 1.4e-48 54.5 123/123  
:BLT:SWISS 13->394 PAAJ_ECOLX 5e-75 43.2 %
:PROS 375->388|PS00099|THIOLASE_3
:PROS 340->356|PS00737|THIOLASE_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55332.1 GT:GENE fadA2 GT:PRODUCT putative acyl-CoA thiolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 504819..506009 GB:FROM 504819 GB:TO 506009 GB:DIRECTION + GB:GENE fadA2 GB:PRODUCT putative acyl-CoA thiolase GB:PROTEIN_ID BAD55332.1 LENGTH 396 SQ:AASEQ MSAPSARRPYAPLRDAYVVDAVRTPVGKRGGALAGVHPADLGAAALRGLFDRNSIDPINVDDVIVGCVDNVGPQAGNIGRTMWLAAGYPEEVPGVTVDRQCGSSQQAINFGAQAIMSGTAEVIVAGGVQNMSAIPISAAMLAGKEYGFDSPFVGAQGWDHRYGTEEVSQFRGAQLIAEKWNISRRDMEEWALRSHERARDAIKNGRFDNEIVPVGDFWIDQGPRETSLEKMASLPPLAEGSPLTAAVASQISDGASATLLASEWAVQEYGLKPRARIHHVSARGADPIFMLTAPIPATKWALEKTGLTIDDIDVVEINEAFAPVVLAWIKETGADPEKVNVNGGAIALGHPLGATGAKLFATLLNELERRNGRYGLLTICEGGGTANATIIERLDR GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 13->394|PAAJ_ECOLX|5e-75|43.2|380/401| PROS 375->388|PS00099|THIOLASE_3|PDOC00092| PROS 340->356|PS00737|THIOLASE_2|PDOC00092| BL:PDB:NREP 1 BL:PDB:REP 15->392|1ulqC|7e-78|44.2|373/399| RP:PDB:NREP 1 RP:PDB:REP 17->394|1dluA|1e-72|38.7|377/389| RP:PFM:NREP 2 RP:PFM:REP 14->263|PF00108|4e-41|48.1|243/261|Thiolase_N| RP:PFM:REP 271->392|PF02803|8e-30|59.8|122/131|Thiolase_C| HM:PFM:NREP 2 HM:PFM:REP 14->263|PF00108|1.3e-60|41.5|248/264|Thiolase_N| HM:PFM:REP 271->393|PF02803|1.4e-48|54.5|123/123|Thiolase_C| GO:PFM:NREP 4 GO:PFM GO:0008152|"GO:metabolic process"|PF00108|IPR002155| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF00108|IPR002155| GO:PFM GO:0008152|"GO:metabolic process"|PF02803|IPR002155| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF02803|IPR002155| RP:SCP:NREP 2 RP:SCP:REP 14->268|1afwA1|2e-60|31.3|246/266|c.95.1.1| RP:SCP:REP 253->392|1bi5A2|5e-28|14.8|135/154|c.95.1.2| HM:SCP:REP 15->270|1qflA1|3.4e-65|43.1|255/0|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 272->394|1ulqA2|1.9e-44|56.9|123/0|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 3813 OP:NHOMOORG 872 OP:PATTERN 1111111222222221-132221441111-141--11------1111-111111------13331--- 234473-41123339HE77-7C33BD777779DDDDCQRU2A4F23342111777346--89A-769A987-----------7----------------3-333232232--------------------------33344---311-12--1-----------1------------------75544---533444444443445444352233444464463111111172-333333333333333222311111111111--11111--1-122111-3222--------------3333333333333-11---1112-13221111111111-3332111-1-1-5-12-872516-161--1-11-5--C888-----32A782337986634444444435-22522824438-444354555655593635675555467--------511-1546------------1111-11--1--1----159F8-4B95B888AA86788888AA888878I9FBFF921896966BBA98CC7225----44-------221B764D47-----------645-7-2--44445513-----------1-1111111-------33-462534633333334733334353354---3411------43421345334544555-355444454434444544678733332333333333333333373323334--222222222222---3222223333-7537111----11-11-1-999896A56481AA9A7B79A97996666111111111-222433333553443344444445------2233233311111111--1-------------------------11111-1------ 11--334-421-5655566766666675657564445565355666555557786755565532422214223242212224444411-56454443333645B561545A8B53865565555AE4F3Es6-8795555445544536564475695B35649545646756643261J1114244966854475744 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 394 STR:RPRED 99.5 SQ:SECSTR ##cccEEEEEEcTTTEEEEEEEEcccEETTcTTTTccHHHHHHHHHHHHHHHHTccGGGccEEEEEccccTTTccccHHHHHHHHTTccTTcEEEEEccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEEcTTccEEccccccccccccccEEHHHHHHTccTTTcccHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHTTTTTTTcccEEEEcccTTccTccHHHHHTcccccTTcccccccccccEEEEEEEEEEEHHHHHHHTccccEEEEEEEEEEccGGGGGGTHHHHHHHHHHHHTccGGGccEEEEccccHHHHHHHHHHHcccGGGccTTccHHHHcccTTTHHHHHHHHHHHHHHHHTccEEEEEEEETTTEEEEEEEEcccc DISOP:02AL 1-10| PSIPRED cccccccccccccccEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHccccHHHcccEEEEccccccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccHHcccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEccccccccHHHHHccccccccccccccccccccccEEEEEEccHHHHHHccccEEEEEEEEEEEcccHHHccccHHHHHHHHHHHHcccHHHEEEEEEEccHHHHHHHHHHHcccccccccccccHHHcccccHHHHHHHHHHHHHHHHHccccEEEEEEEccHHHEEEEEEEEEcc //