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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadA3
DDBJ      :fadA3        putative acyl-CoA thiolase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  631/915 : Eukaryota  192/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:387 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->385 1ulqC PDBj 2e-63 40.2 %
:RPS:PDB   5->387 1dluA PDBj 5e-53 34.9 %
:RPS:SCOP  5->261 1afwA1  c.95.1.1 * 1e-46 29.8 %
:RPS:SCOP  246->385 1bi5A2  c.95.1.2 * 1e-24 12.6 %
:HMM:SCOP  3->263 1qflA1 c.95.1.1 * 9.6e-65 46.0 %
:HMM:SCOP  265->387 1ulqA2 c.95.1.1 * 4.5e-37 44.7 %
:RPS:PFM   5->256 PF00108 * Thiolase_N 9e-27 45.3 %
:RPS:PFM   264->385 PF02803 * Thiolase_C 4e-20 47.5 %
:HMM:PFM   4->256 PF00108 * Thiolase_N 2.1e-64 45.1 246/264  
:HMM:PFM   265->386 PF02803 * Thiolase_C 2.3e-40 45.9 122/123  
:BLT:SWISS 5->387 FADA_IDILO 3e-64 40.6 %
:PROS 333->349|PS00737|THIOLASE_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55362.1 GT:GENE fadA3 GT:PRODUCT putative acyl-CoA thiolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(532009..533172) GB:FROM 532009 GB:TO 533172 GB:DIRECTION - GB:GENE fadA3 GB:PRODUCT putative acyl-CoA thiolase GB:PROTEIN_ID BAD55362.1 LENGTH 387 SQ:AASEQ MGTPVIVEAARTPIGKRGGWLAGLHAAELLGLAQRGLLERAHLDPALVEQVVGGCVTQAGEQSNNITRVAWLHAGLPWQVGATTIDAQCGSAQQANHLIAGLIAADAIDIGMACGVEAMSRVPLGANVGENAGPRRPASWSIDLPNQFEAAERIAKRRGITRDDVDEFGLRSQRLAAQAWAEGRFEREIIPVTAPAVDKEGTLTGEKLDVTRDQGLRETTKEGLAKLKPVLEGGVHTAGSSSQISDGAAAVLLMDEKAAERTGLRPRARIRTQVLVGGEPEFHLDGPVQACSRLLERSGMSIGDIDLFEINEAFASVALSWASVHKPDMDRVNVNGGAIALGHPVGSTGSRLITTALHELERTGGATAMILMCAGGAMATGTIIERI GT:EXON 1|1-387:0| BL:SWS:NREP 1 BL:SWS:REP 5->387|FADA_IDILO|3e-64|40.6|372/387| PROS 333->349|PS00737|THIOLASE_2|PDOC00092| SEG 18->33|ggwlaglhaaellgla| SEG 98->111|liagliaadaidig| BL:PDB:NREP 1 BL:PDB:REP 6->385|1ulqC|2e-63|40.2|373/399| RP:PDB:NREP 1 RP:PDB:REP 5->387|1dluA|5e-53|34.9|375/389| RP:PFM:NREP 2 RP:PFM:REP 5->256|PF00108|9e-27|45.3|243/261|Thiolase_N| RP:PFM:REP 264->385|PF02803|4e-20|47.5|122/131|Thiolase_C| HM:PFM:NREP 2 HM:PFM:REP 4->256|PF00108|2.1e-64|45.1|246/264|Thiolase_N| HM:PFM:REP 265->386|PF02803|2.3e-40|45.9|122/123|Thiolase_C| GO:PFM:NREP 4 GO:PFM GO:0008152|"GO:metabolic process"|PF00108|IPR002155| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF00108|IPR002155| GO:PFM GO:0008152|"GO:metabolic process"|PF02803|IPR002155| GO:PFM GO:0016747|"GO:transferase activity, transferring acyl groups other than amino-acyl groups"|PF02803|IPR002155| RP:SCP:NREP 2 RP:SCP:REP 5->261|1afwA1|1e-46|29.8|245/266|c.95.1.1| RP:SCP:REP 246->385|1bi5A2|1e-24|12.6|135/154|c.95.1.2| HM:SCP:REP 3->263|1qflA1|9.6e-65|46.0|252/0|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 265->387|1ulqA2|4.5e-37|44.7|123/0|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 3721 OP:NHOMOORG 853 OP:PATTERN 11-1--1222222221-12222133111--13-----------------------------2221--- 233473-41123339GE66-6C33BC666669DDDDCORT294F23342111777346--89A-7699987-----------7----------------3-333232232--------------------------33344---311-12--1-----------1------------------75544---533444444443445444352233444464463111111172-333333333333333222311111111111--11111--1-122111-3222--------------3333333333333-11---1112-13221111111111-3332111-1-1-5-12-872516-151--1-11-5--C888-----32A782337986734434444435-22522824438-444354555755583635675555467--------511-1546------------1111-11--1--1----159F8-4A95A888AA867887889A888878I9FBEF921896966BBA98CC7225----44-------221B764C46-----------645-7-2--44445513-----------1-1111111-------33-462534633333334733334353354---3411------43421345334544455-355444454434444544678733332333333333333333373323334--222222222222---3222223333-7537111----11-11-1-999896A56481AA9A7A79A97996666111111111-222433333553443344444445------2222233311111111--1-------------------------11111-1------ 11--334-42--5655566766666665657664445545355666555557786755565532422214223242212224444411-56454443433545A561544A8B52765454555AE4E3Ci5-8684554445545535464485695A35647545446745542251J1114244966854475744 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 387 STR:RPRED 100.0 SQ:SECSTR TTTEEEEEEEEcccEETTcTTTTccHHHHHHHHHHHHHHHHTccGGGccEEEEEccccTTTccccHHHHHHHHTTccTTcEEEEEccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEEcTTccccccccEEHHHHHHTccTTTcccHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHTTTTTTTcccEEEccccccEEccEEEEEEcccTTccTccHHHHHTcccccTTcccccccccccEEEEEEEEEEEHHHHHHHTccccEEEEEEEEEEccGGGGGGTHHHHHHHHHHHHTccGGGccEEEEccccHHHHHHHHHHHcccGGGccTTccHHHHcccTTTHHHHHHHHHHHHHHHHTccEEEEEEEETTTEEEEEEEEcc DISOP:02AL 386-388| PSIPRED ccccEEEEEEcccccccccccccccHHHHHHHHHHHHHHHccccHHHccEEEEEEEEccccccccHHHHHHHHHHccccccEEEEcccHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccccEEEEcccccccccHHHHHHcccccccccEEEcccccccccEEEEEEEcHHHHHHcccccEEEEEEEEEEcccHHHccccHHHHHHHHHHHccccHHHEEEEEEEccHHHHHHHHHHHcccccHHccccccHHHHcccHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEcc //