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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE11
DDBJ      :fadE11       putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  528/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:412 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   91->409 2pg0B PDBj 2e-49 39.6 %
:RPS:PDB   2->412 3d9dA PDBj 4e-66 18.5 %
:RPS:SCOP  2->252 1siqA2  e.6.1.1 * 3e-48 30.5 %
:RPS:SCOP  260->410 1bucA1  a.29.3.1 * 8e-28 40.0 %
:HMM:SCOP  1->253 2c12A2 e.6.1.1 * 6.4e-55 34.6 %
:HMM:SCOP  260->411 1bucA1 a.29.3.1 * 9.3e-41 41.7 %
:RPS:PFM   11->138 PF02771 * Acyl-CoA_dh_N 1e-07 38.3 %
:RPS:PFM   142->195 PF02770 * Acyl-CoA_dh_M 1e-11 52.8 %
:RPS:PFM   260->410 PF00441 * Acyl-CoA_dh_1 3e-24 44.7 %
:HMM:PFM   260->410 PF00441 * Acyl-CoA_dh_1 8.4e-44 44.0 150/150  
:HMM:PFM   142->194 PF02770 * Acyl-CoA_dh_M 6e-21 51.9 52/52  
:HMM:PFM   5->138 PF02771 * Acyl-CoA_dh_N 3.9e-19 35.4 113/113  
:BLT:SWISS 2->401 ACDS_CLOAB 3e-53 34.9 %
:PROS 144->156|PS00072|ACYL_COA_DH_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55773.1 GT:GENE fadE11 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1030299..1031537 GB:FROM 1030299 GB:TO 1031537 GB:DIRECTION + GB:GENE fadE11 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD55773.1 LENGTH 412 SQ:AASEQ MFEWSETDLMVRDAVRGFIDREIRPNLDALDSGEMLPYPILRKMFAEFGIAAMATESLEKSLAAEEARTEGGDAPERGGSGAFGQQSMMAVVVSELSGVCLGLVSAMGVSTGLGAATIMARGTLAQKKRWLPELVTMEKVAAWAITEPDSGSDAFGGMKTYVRRDGEDYLLNGQKTFITNGPYADVIVVYAKLDEGDANVDKRDRKVLTFVLDKGMEGLTQGKPFKKMGLHASPTGELFFDNVRLGRDRLLGETEEHRGGDGRESARTNFVAERVGVAFQALGIIEECHRLCVEYAKNRRLWGQEIGRFQLVQLKLAKMEIARINVRNMVFSTLERGRAGKPLSLAEASAMKLYCSETATEVAMEAVQLFGGNGYMSEYRVEQLARDAKSLMIYAGSNEIQVTHIAKGLLGR GT:EXON 1|1-412:0| BL:SWS:NREP 1 BL:SWS:REP 2->401|ACDS_CLOAB|3e-53|34.9|367/379| PROS 144->156|PS00072|ACYL_COA_DH_1|PDOC00070| SEG 54->67|ateslekslaaeea| BL:PDB:NREP 1 BL:PDB:REP 91->409|2pg0B|2e-49|39.6|308/377| RP:PDB:NREP 1 RP:PDB:REP 2->412|3d9dA|4e-66|18.5|384/432| RP:PFM:NREP 3 RP:PFM:REP 11->138|PF02771|1e-07|38.3|107/113|Acyl-CoA_dh_N| RP:PFM:REP 142->195|PF02770|1e-11|52.8|53/53|Acyl-CoA_dh_M| RP:PFM:REP 260->410|PF00441|3e-24|44.7|150/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 260->410|PF00441|8.4e-44|44.0|150/150|Acyl-CoA_dh_1| HM:PFM:REP 142->194|PF02770|6e-21|51.9|52/52|Acyl-CoA_dh_M| HM:PFM:REP 5->138|PF02771|3.9e-19|35.4|113/113|Acyl-CoA_dh_N| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 2->252|1siqA2|3e-48|30.5|220/236|e.6.1.1| RP:SCP:REP 260->410|1bucA1|8e-28|40.0|150/151|a.29.3.1| HM:SCP:REP 1->253|2c12A2|6.4e-55|34.6|231/0|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 260->411|1bucA1|9.3e-41|41.7|151/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 5926 OP:NHOMOORG 723 OP:PATTERN 44----5677977866-143321D96661-7B-----------------------------3661--- 4556R3-5111846SlaKK-Ka33YbKKKKKPebkbSh**4T8T1133-11-667668--CCT1CDPLIID--------384B-----11111122---41545564565--------------------------66577---B311-1------------------12-------------68866--1D635555545555555553455545557CA9A11------53-111111-11111111---1--1------------------------------------------------------------------111315444444444423222221-6-315-13-B91598-17---11-3-61-IGGI-----31SKN333MFOJG88787885756-34B44D3B78P-5443525546458C8L89BB6666D8G111111119----986------------------------------IHRF17NEANB9ABJBA466788HBABAA5FK7SPjcZ24CEAA5AECKBFGKY--7----35----------E653XED-----------765-9-5--7787B865------------1--------------43-7A386F714655546955549597477---121-------21511112223233222-2222222212222222221---11--13231333332313113-1121111------1-----1----4111115555-JC23---------------GGHEGBE8A96-HHHJ8HACEA9ACD546----------1--31111135-334455555555-------2998799----------1-------------------------1--11-1------ ----678-731-AA9EACAC888978CBA7989778A989899799977789BD7A7667674--------------------------7B7A8876455898CCC-B54GDUBBEEA8979D9IB6I9R*D-EBP6886C79FB49978C73EADBAMBHG7GBD877CBEJCG2233Z42354666EA3544D8988 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 412 STR:RPRED 100.0 SQ:SECSTR TccccHHHHHHHHHHHHHHHHTGGGHHHHHTHHHHHTHHHHHHHHHHTTTTGGGccTTTTGGGcTTcccccTccGGGTcccccHcHHHHHHHHHHHHTTccTHTHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEcccTTccTTTTcccccEEEEETTEEEEEEEEcccTTTccccEEEEEEEEcccccTTccGGGGEEEEEEcHHHHHTccGGGEcccccTTccccEEEEEEEEEEGGGccccTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTccccTTTTHHHHHHHHHHc DISOP:02AL 412-413| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEEEEEcccccccccHHHccEEEEEEEccEEEEEcEEEEEEccccccEEEEEEEEcccccccccccccEEEEEEEcccccEEEEcccccccccccccEEEEEccEEccHHHHcccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcc //