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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE15
DDBJ      :fadE15       putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  577/915 : Eukaryota  165/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:387 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->376 2d29A PDBj 2e-67 39.5 %
:RPS:PDB   9->386 3d9dA PDBj 3e-79 22.8 %
:RPS:SCOP  4->230 1rx0A2  e.6.1.1 * 2e-58 34.5 %
:RPS:SCOP  231->376 1bucA1  a.29.3.1 * 3e-30 36.3 %
:HMM:SCOP  2->231 1jqiA2 e.6.1.1 * 3.8e-77 45.7 %
:HMM:SCOP  231->381 1bucA1 a.29.3.1 * 1.2e-46 47.0 %
:RPS:PFM   16->120 PF02771 * Acyl-CoA_dh_N 9e-20 52.4 %
:RPS:PFM   125->175 PF02770 * Acyl-CoA_dh_M 7e-08 47.1 %
:RPS:PFM   231->376 PF00441 * Acyl-CoA_dh_1 4e-24 50.0 %
:HMM:PFM   231->376 PF00441 * Acyl-CoA_dh_1 1.6e-44 44.5 146/150  
:HMM:PFM   13->120 PF02771 * Acyl-CoA_dh_N 3.5e-31 47.2 108/113  
:HMM:PFM   124->175 PF02770 * Acyl-CoA_dh_M 6.9e-22 53.8 52/52  
:BLT:SWISS 16->377 ACDS_CLOAB 2e-67 38.1 %
:PROS 126->138|PS00072|ACYL_COA_DH_1
:PROS 338->357|PS00073|ACYL_COA_DH_2

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56075.1 GT:GENE fadE15 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1367303..1368466 GB:FROM 1367303 GB:TO 1368466 GB:DIRECTION + GB:GENE fadE15 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD56075.1 LENGTH 387 SQ:AASEQ MSVPVLDHDLDLTEFRSSVRAFAEAEILPGAAERDASARFPADLVRRLADQDLMGISVPTEYGGLGLSTRAQLVAIEEVARADAALASIYTAHYLGLEPILVGGTEEQRARRLPALAAGEQLAGFALTEPDAGSDIASMRTVARRAADGWHVSGAKTFISNAREADLVVLFAKTDPDAGFRGITAFAVPKGTPGITYSEPQDKLGIRSAPTYTVYLDDVVLPHDAVIGTEGRGGNIALTALNRARIDVAAMANGIALRAWELGRRYAAERKQFGHPIAEFQAIQLLLGACDAELVAARVTADWAADVKDAGQDLRRAASISKYTATEACFAIVDRVVQIHGGAGFMRESEIERLYRDCRILRIFEGTSQIQLLTIAGNAPSIRSYDY GT:EXON 1|1-387:0| BL:SWS:NREP 1 BL:SWS:REP 16->377|ACDS_CLOAB|2e-67|38.1|362/379| PROS 126->138|PS00072|ACYL_COA_DH_1|PDOC00070| PROS 338->357|PS00073|ACYL_COA_DH_2|PDOC00070| BL:PDB:NREP 1 BL:PDB:REP 20->376|2d29A|2e-67|39.5|357/386| RP:PDB:NREP 1 RP:PDB:REP 9->386|3d9dA|3e-79|22.8|378/432| RP:PFM:NREP 3 RP:PFM:REP 16->120|PF02771|9e-20|52.4|105/113|Acyl-CoA_dh_N| RP:PFM:REP 125->175|PF02770|7e-08|47.1|51/53|Acyl-CoA_dh_M| RP:PFM:REP 231->376|PF00441|4e-24|50.0|146/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 231->376|PF00441|1.6e-44|44.5|146/150|Acyl-CoA_dh_1| HM:PFM:REP 13->120|PF02771|3.5e-31|47.2|108/113|Acyl-CoA_dh_N| HM:PFM:REP 124->175|PF02770|6.9e-22|53.8|52/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 4->230|1rx0A2|2e-58|34.5|226/231|e.6.1.1| RP:SCP:REP 231->376|1bucA1|3e-30|36.3|146/151|a.29.3.1| HM:SCP:REP 2->231|1jqiA2|3.8e-77|45.7|230/231|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 231->381|1bucA1|1.2e-46|47.0|151/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 7750 OP:NHOMOORG 772 OP:PATTERN 55----6888A88977-243532DA6661-7C-----------------------------5661--- 4557Z3-5221846b*qSS-Ss44rzSSSSSbyw*wgu**4i9n1144-33-668668--LIX1IKXRKPG--------384B-----11111122---41545664565--------------------------676AA---D322-3223-------------1225-------------88877--1E746666646666666664566656667CBAA11------54-22222211222222211-2--1---------1--------------------------------------------------------111315444444444423222221-6-316-13-B91596-17---11-3-71-TLLV-----73aOY665TGTPLAA9A9AA7978-56C67H5FBBX-F99996698989CHATBACF7777D9J21222222B---29A6-----------------------------1NMXN18WLDRFEGKSGFBFFCCCPHLLLMBKXEddxuk35IJDC6GGGSHJKTd349---366-------212I984iJK-----------765-B-5--8898EE66------------1--------1-----54-AF498GB16766669E6666B6D8698---221-------42831214445455444-444444443444444444332311112554245544353533522333233--222232212232---6222228888-LE43-----------1---KLMILFJ8AAG2UUUWCUILLJHIGGD9D111111111-111422222462446776666566------12CCA9BB----------1-------------------------1--11-1------ ----57A-941-AAAEBBAD99AC89CCC9999888AA9A9AABDD977799CF8A7767774--------------------------8B7B8876666999DCD-B76JEUBBFE9999AD9IB6J9S*D-FBQ6985D7AGB4AB69C83EACBBPAGI7JCD899DCFKCH2344i43354667G93565G9A99 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 382 STR:RPRED 98.7 SQ:SECSTR ####cccccccccHHHHHHHHHHHHTGGGHHHHccHHHHHHHHHHHHHHHTTTTGGGccGGGTcccccHHHHHHHHHHHHTTccTTHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEcccTTccTTccccccEEEEETTEEEEEEEEcccTTTccccEEEEEEEEcccTTGGGEEEEEEcHHHHHTccGGcccccccTTccccEEEEEEEEEEGGGccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTccccTTTTHHHHHHHHHHcTTcc# DISOP:02AL 384-387| PSIPRED cccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHcHHHHcccEEEEEEEccccccccccccEEEEEEEccEEEEEEEEEEEcccccccEEEEEEEEccccccccEEEEEEEcccccEEEcccccccccccccccEEEEccEEEcHHHcccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccc //