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DDBJ      :fadE17       putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]

e.6.1

:369 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   43->217 2d29A PDBj 5e-08 24.0 %
:RPS:PDB   8->337 2cx9A PDBj 1e-18 21.2 %
:RPS:SCOP  41->217 1rx0A2  e.6.1.1 * 1e-16 18.3 %
:HMM:SCOP  9->217 1jqiA2 e.6.1.1 * 4.6e-27 30.3 %
:HMM:PFM   40->100 PF02771 * Acyl-CoA_dh_N 8.7e-05 31.1 61/113  
:HMM:PFM   123->159 PF02770 * Acyl-CoA_dh_M 0.00039 24.3 37/52  
:BLT:SWISS 30->217 ACADV_MOUSE 3e-07 27.4 %
:SEG

SeqInfo   AminoSeq     See neighboring genes

Links GIB  DAD                                            Abbreviations  Back to title page

GT:ID          BAD56286.1
GT:GENE        fadE17
GT:PRODUCT     putative acyl-CoA dehydrogenase
GT:DATABASE    GIB00210CH01
GT:ORG         nfar0
GB:ACCESSION   GIB00210CH01
GB:LOCATION    1623077..1624186
GB:FROM        1623077
GB:TO          1624186
GB:DIRECTION   +
GB:GENE        fadE17
GB:PRODUCT     putative acyl-CoA dehydrogenase
GB:PROTEIN_ID  BAD56286.1
LENGTH         369
SQ:AASEQ       MRFMSRELETAQRFVPGLDARLREVPLPVLESPDSPGLALFKEYGGPGLLIAKEAGGLGATLWEAAQIHRLLGSHSPSLAIAVNMHSCTVAAIPEGPGTEAMLGMVAAGNLYLASAFAEGVPGASVIAPKLRGTRITGGWRLDGSKKPCSLARSMDILTASVLLTPDGADEPELALVVVPADSPGLAVRTLTGAPVFPASETEEVVLTGVEIPDEAVSFFGRTDRLNAALTAGWLTFELLVSACYLGMASGLVREVLEQARGSAADRMLLVGELEAAMAAIEAVATEIMNGGSEADTVARALHVRFATQRAIERVSAAATELLGGVAFLTGSSAQRYAGCRALAFHPPSRLSIAEPLDRFTAGEPLIVT
GT:EXON        1|1-369:0|
BL:SWS:NREP    1
BL:SWS:REP     30->217|ACADV_MOUSE|3e-07|27.4|186/656|
SEG            273->287|eleaamaaieavate|
BL:PDB:NREP    1
BL:PDB:REP     43->217|2d29A|5e-08|24.0|175/386|
RP:PDB:NREP    1
RP:PDB:REP     8->337|2cx9A|1e-18|21.2|321/385|
HM:PFM:NREP    2
HM:PFM:REP     40->100|PF02771|8.7e-05|31.1|61/113|Acyl-CoA_dh_N|
HM:PFM:REP     123->159|PF02770|0.00039|24.3|37/52|Acyl-CoA_dh_M|
RP:SCP:NREP    1
RP:SCP:REP     41->217|1rx0A2|1e-16|18.3|175/231|e.6.1.1|
HM:SCP:REP     9->217|1jqiA2|4.6e-27|30.3|208/231|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like|
OP:NHOMO       22
OP:NHOMOORG    20
OP:PATTERN     -------------------------------------------------------------------- --------------1------1--------------2--1-2-1-----1--------------1--11-------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1--------------------1-1----1------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED      365
STR:RPRED      98.9
SQ:SECSTR      TccccccHHHHHHHHGGHHHHHHHccccHccHHHHHHHHHHGGGTGGGTTccGGGTcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHTHHHHHHHHccHHHHHHHHHTcccEEEEcccTTccTTGGGcccEEEEETTEEEEEEEEEEEETTTTccEEEEEEEccccccTTcTEEEEEEEcccccEEEcccccccccTTccEEEEEEEEEEEEGGGEGEEccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGcTTcTHHHHHHHGGGGTccccHHHHHHHHHHHHHHTT####
DISOP:02AL     369-370|
PSIPRED        cccHHHHHHHHHHHHHHHHHHHcccccccHHHccccHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccEEEEEEcccccccccccccEEEEEEEccEEEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEEEcccccEEEEccccccccccccccEEEEccEEccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccc
//