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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE17
DDBJ      :fadE17       putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  20/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
e.6.1
:369 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   43->217 2d29A PDBj 5e-08 24.0 %
:RPS:PDB   8->337 2cx9A PDBj 1e-18 21.2 %
:RPS:SCOP  41->217 1rx0A2  e.6.1.1 * 1e-16 18.3 %
:HMM:SCOP  9->217 1jqiA2 e.6.1.1 * 4.6e-27 30.3 %
:HMM:PFM   40->100 PF02771 * Acyl-CoA_dh_N 8.7e-05 31.1 61/113  
:HMM:PFM   123->159 PF02770 * Acyl-CoA_dh_M 0.00039 24.3 37/52  
:BLT:SWISS 30->217 ACADV_MOUSE 3e-07 27.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56286.1 GT:GENE fadE17 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1623077..1624186 GB:FROM 1623077 GB:TO 1624186 GB:DIRECTION + GB:GENE fadE17 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD56286.1 LENGTH 369 SQ:AASEQ MRFMSRELETAQRFVPGLDARLREVPLPVLESPDSPGLALFKEYGGPGLLIAKEAGGLGATLWEAAQIHRLLGSHSPSLAIAVNMHSCTVAAIPEGPGTEAMLGMVAAGNLYLASAFAEGVPGASVIAPKLRGTRITGGWRLDGSKKPCSLARSMDILTASVLLTPDGADEPELALVVVPADSPGLAVRTLTGAPVFPASETEEVVLTGVEIPDEAVSFFGRTDRLNAALTAGWLTFELLVSACYLGMASGLVREVLEQARGSAADRMLLVGELEAAMAAIEAVATEIMNGGSEADTVARALHVRFATQRAIERVSAAATELLGGVAFLTGSSAQRYAGCRALAFHPPSRLSIAEPLDRFTAGEPLIVT GT:EXON 1|1-369:0| BL:SWS:NREP 1 BL:SWS:REP 30->217|ACADV_MOUSE|3e-07|27.4|186/656| SEG 273->287|eleaamaaieavate| BL:PDB:NREP 1 BL:PDB:REP 43->217|2d29A|5e-08|24.0|175/386| RP:PDB:NREP 1 RP:PDB:REP 8->337|2cx9A|1e-18|21.2|321/385| HM:PFM:NREP 2 HM:PFM:REP 40->100|PF02771|8.7e-05|31.1|61/113|Acyl-CoA_dh_N| HM:PFM:REP 123->159|PF02770|0.00039|24.3|37/52|Acyl-CoA_dh_M| RP:SCP:NREP 1 RP:SCP:REP 41->217|1rx0A2|1e-16|18.3|175/231|e.6.1.1| HM:SCP:REP 9->217|1jqiA2|4.6e-27|30.3|208/231|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| OP:NHOMO 22 OP:NHOMOORG 20 OP:PATTERN -------------------------------------------------------------------- --------------1------1--------------2--1-2-1-----1--------------1--11-------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1--------------------1-1----1------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 365 STR:RPRED 98.9 SQ:SECSTR TccccccHHHHHHHHGGHHHHHHHccccHccHHHHHHHHHHGGGTGGGTTccGGGTcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHTHHHHHHHHccHHHHHHHHHTcccEEEEcccTTccTTGGGcccEEEEETTEEEEEEEEEEEETTTTccEEEEEEEccccccTTcTEEEEEEEcccccEEEcccccccccTTccEEEEEEEEEEEEGGGEGEEccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGcTTcTHHHHHHHGGGGTccccHHHHHHHHHHHHHHTT#### DISOP:02AL 369-370| PSIPRED cccHHHHHHHHHHHHHHHHHHHcccccccHHHccccHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccEEEEEEcccccccccccccEEEEEEEccEEEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEEEcccccEEEEccccccccccccccEEEEccEEccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccc //