Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE17
DDBJ :fadE17 putative acyl-CoA dehydrogenase
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 20/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
e.6.1














:369 amino acids













































:SECSTR











































:PSIPRED

:DISOPRED


:BLT:PDB 43->217 2d29A PDBj 5e-08 24.0 %


:RPS:PDB 8->337 2cx9A PDBj 1e-18 21.2 %


:RPS:SCOP 41->217 1rx0A2 e.6.1.1 * 1e-16 18.3 %


:HMM:SCOP 9->217 1jqiA2 e.6.1.1 * 4.6e-27 30.3 %


:HMM:PFM 40->100 PF02771 * Acyl-CoA_dh_N 8.7e-05 31.1 61/113


:HMM:PFM 123->159 PF02770 * Acyl-CoA_dh_M 0.00039 24.3 37/52


:BLT:SWISS 30->217 ACADV_MOUSE 3e-07 27.4 %


:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56286.1
GT:GENE fadE17
GT:PRODUCT putative acyl-CoA dehydrogenase
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 1623077..1624186
GB:FROM 1623077
GB:TO 1624186
GB:DIRECTION +
GB:GENE fadE17
GB:PRODUCT putative acyl-CoA dehydrogenase
GB:PROTEIN_ID BAD56286.1
LENGTH 369
SQ:AASEQ MRFMSRELETAQRFVPGLDARLREVPLPVLESPDSPGLALFKEYGGPGLLIAKEAGGLGATLWEAAQIHRLLGSHSPSLAIAVNMHSCTVAAIPEGPGTEAMLGMVAAGNLYLASAFAEGVPGASVIAPKLRGTRITGGWRLDGSKKPCSLARSMDILTASVLLTPDGADEPELALVVVPADSPGLAVRTLTGAPVFPASETEEVVLTGVEIPDEAVSFFGRTDRLNAALTAGWLTFELLVSACYLGMASGLVREVLEQARGSAADRMLLVGELEAAMAAIEAVATEIMNGGSEADTVARALHVRFATQRAIERVSAAATELLGGVAFLTGSSAQRYAGCRALAFHPPSRLSIAEPLDRFTAGEPLIVT
GT:EXON 1|1-369:0|
BL:SWS:NREP 1
BL:SWS:REP 30->217|ACADV_MOUSE|3e-07|27.4|186/656|
SEG 273->287|eleaamaaieavate|
BL:PDB:NREP 1
BL:PDB:REP 43->217|2d29A|5e-08|24.0|175/386|
RP:PDB:NREP 1
RP:PDB:REP 8->337|2cx9A|1e-18|21.2|321/385|
HM:PFM:NREP 2
HM:PFM:REP 40->100|PF02771|8.7e-05|31.1|61/113|Acyl-CoA_dh_N|
HM:PFM:REP 123->159|PF02770|0.00039|24.3|37/52|Acyl-CoA_dh_M|
RP:SCP:NREP 1
RP:SCP:REP 41->217|1rx0A2|1e-16|18.3|175/231|e.6.1.1|
HM:SCP:REP 9->217|1jqiA2|4.6e-27|30.3|208/231|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like|
OP:NHOMO 22
OP:NHOMOORG 20
OP:PATTERN -------------------------------------------------------------------- --------------1------1--------------2--1-2-1-----1--------------1--11-------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----1--------------------1-1----1------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 365
STR:RPRED 98.9
SQ:SECSTR TccccccHHHHHHHHGGHHHHHHHccccHccHHHHHHHHHHGGGTGGGTTccGGGTcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHTHHHHHHHHccHHHHHHHHHTcccEEEEcccTTccTTGGGcccEEEEETTEEEEEEEEEEEETTTTccEEEEEEEccccccTTcTEEEEEEEcccccEEEcccccccccTTccEEEEEEEEEEEEGGGEGEEccTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGcTTcTHHHHHHHGGGGTccccHHHHHHHHHHHHHHTT####
DISOP:02AL 369-370|
PSIPRED cccHHHHHHHHHHHHHHHHHHHcccccccHHHccccHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccEEEEEEcccccccccccccEEEEEEEccEEEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEEEcccccEEEEccccccccccccccEEEEccEEccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHcccccccc
//