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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE19
DDBJ      :fadE19       putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  558/915 : Eukaryota  171/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->382 2pg0B PDBj 6e-98 49.9 %
:RPS:PDB   23->382 3d9dC PDBj 5e-87 17.5 %
:RPS:SCOP  23->231 1rx0A2  e.6.1.1 * 2e-62 31.9 %
:RPS:SCOP  234->382 1bucA1  a.29.3.1 * 2e-31 34.2 %
:HMM:SCOP  6->247 1w07A3 e.6.1.2 * 3.7e-87 48.1 %
:HMM:SCOP  234->384 1bucA1 a.29.3.1 * 3.9e-45 41.1 %
:RPS:PFM   23->121 PF02771 * Acyl-CoA_dh_N 8e-18 45.5 %
:RPS:PFM   125->175 PF02770 * Acyl-CoA_dh_M 7e-11 51.0 %
:RPS:PFM   234->382 PF00441 * Acyl-CoA_dh_1 5e-26 40.3 %
:HMM:PFM   234->381 PF00441 * Acyl-CoA_dh_1 9.3e-43 39.2 148/150  
:HMM:PFM   11->121 PF02771 * Acyl-CoA_dh_N 5.6e-36 43.2 111/113  
:HMM:PFM   125->176 PF02770 * Acyl-CoA_dh_M 2.4e-26 59.6 52/52  
:BLT:SWISS 23->382 ACADL_MOUSE 5e-94 48.7 %
:PROS 341->360|PS00073|ACYL_COA_DH_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57023.1 GT:GENE fadE19 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2348166..2349314) GB:FROM 2348166 GB:TO 2349314 GB:DIRECTION - GB:GENE fadE19 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD57023.1 LENGTH 382 SQ:AASEQ MTGSRSPWMDDDLDALRDLARAFCEKEIQPHLDRFIDQHQVDRDLWRAAGELGLLGLSIPEEYGGGGGTFAHEAVLVEEQARIGDTAWGAAMHNAIVAHYLLAYGTEEQKRTWLPRLCSGEVVGALAMTEPGTGSDLQAIRTRAVREGDDYVINGAKTFITNGGQADLVIVVAKTGAIADGAAGTSLILMETDRPGFRRGRRLDKIGQRGQDTSELFFDDVRVPVGNLLGESEGQGFVQLMQQLPQERLIILVGSVVAMETALAQTISYSKERQAFGKPLFAFQNTKFTLAEVATETRIARVFLDDCITKHIRGELDVPTVAMAKWWITERTMVALDECLQLHGGYGYMTEYPISRAWVDHRVQKIYAGTNEIMKEIIARTL GT:EXON 1|1-382:0| BL:SWS:NREP 1 BL:SWS:REP 23->382|ACADL_MOUSE|5e-94|48.7|359/430| PROS 341->360|PS00073|ACYL_COA_DH_2|PDOC00070| SEG 10->22|dddldalrdlara| BL:PDB:NREP 1 BL:PDB:REP 23->382|2pg0B|6e-98|49.9|359/377| RP:PDB:NREP 1 RP:PDB:REP 23->382|3d9dC|5e-87|17.5|360/430| RP:PFM:NREP 3 RP:PFM:REP 23->121|PF02771|8e-18|45.5|99/113|Acyl-CoA_dh_N| RP:PFM:REP 125->175|PF02770|7e-11|51.0|51/53|Acyl-CoA_dh_M| RP:PFM:REP 234->382|PF00441|5e-26|40.3|149/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 234->381|PF00441|9.3e-43|39.2|148/150|Acyl-CoA_dh_1| HM:PFM:REP 11->121|PF02771|5.6e-36|43.2|111/113|Acyl-CoA_dh_N| HM:PFM:REP 125->176|PF02770|2.4e-26|59.6|52/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 23->231|1rx0A2|2e-62|31.9|207/231|e.6.1.1| RP:SCP:REP 234->382|1bucA1|2e-31|34.2|149/151|a.29.3.1| HM:SCP:REP 6->247|1w07A3|3.7e-87|48.1|241/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 234->384|1bucA1|3.9e-45|41.1|151/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 7437 OP:NHOMOORG 759 OP:PATTERN 44----6888A88977-243532D96661-7C-----------------------------5661--- 4556X4-5111846b*rUU-Uo44uvUUUUUbst*tes**4f9n2145-23-777668--HGX1FHWOKPG--------384B-----11111122---41545664565--------------------------67688---B311-1--2--------------222-------------88978--1D735555545556555553455645567CA9B11------53-22222212222212211-1--1--------------------------------------------------------------1----11315444444444423222221-6-315-13-B91598-17---11-3-71-SLLX-----41ZNQ665THTRLAA9A9AA7978-44C44G4CCBZ-5777656667679HAUBADD7677D9J11111111B----9B6-----------------------------1ONXN17WLDSFCEIRFCBGGEDDPHKKKKCKUCaYvqn35IIDD6GGGRHJMUc33A----66-------212I983gGK-----------765-B-5--7787ED66------------1--------1-----54-AG498GB1576666AE6666B6E8688---221-------31511213445354433-443333432344344344322111-12544245544353533521223232--1---1-----1----6222228778-LE43-----------1---IIIEIDI8AAA1PPQRALEHKFDGFG969111111111----422222462447766666566------12CC98AA----------1-------------------------1--11-1------ ----679-941-AAAFCBCD898B8ABCC8A99878AA9A8AABCC977899BE9A7767774-1----1--1-1------1--1----8B8C8876556999DCD-B87JEVBBFD9899AD9JC6I9R*E-ECQ7A85C7AGB4A979D84EADBBNAGI7JCF878CCEHFH2334i43365767GA3554H9AAA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 360 STR:RPRED 94.2 SQ:SECSTR ######################HHHHTGGGHHHHHTTccHHTHHHHHHHHHTTTTGGGccGGGTcccccHHHHHHHHHHHHTTccTTHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEcccTTccTTTTccccEEEEETTEEEEEEEEEccTTTTcccEEEEEEEEcTTccGGGGEEEEEEcHHHHHTccGGGEcccccTTccccEEEEEEEEEEGGGccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTccccTTTTHHHHHHHH DISOP:02AL 382-383| PSIPRED ccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHHcHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHccccEEEEEEcccccccccHHHcEEEEEEEccEEEEEEEEEEEEccccccEEEEEEEccccccccccEEEEEEEcccccEEEccccccccccccccEEEEEccEEccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHc //