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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE21
DDBJ      :fadE21       putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  479/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:400 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->397 2wbiA PDBj e-101 48.8 %
:RPS:PDB   1->394 3d9gB PDBj 2e-68 19.1 %
:RPS:SCOP  1->242 2c0uA2  e.6.1.1 * 2e-40 20.8 %
:RPS:SCOP  245->397 1bucA1  a.29.3.1 * 6e-22 31.1 %
:HMM:SCOP  2->258 1w07A3 e.6.1.2 * 2.9e-63 36.9 %
:HMM:SCOP  245->397 1bucA1 a.29.3.1 * 1.1e-39 35.1 %
:RPS:PFM   12->126 PF02771 * Acyl-CoA_dh_N 3e-09 41.3 %
:RPS:PFM   133->181 PF02770 * Acyl-CoA_dh_M 2e-09 54.2 %
:RPS:PFM   245->393 PF00441 * Acyl-CoA_dh_1 2e-12 29.3 %
:HMM:PFM   245->393 PF00441 * Acyl-CoA_dh_1 7.2e-37 35.4 147/150  
:HMM:PFM   133->181 PF02770 * Acyl-CoA_dh_M 9.9e-17 54.3 46/52  
:HMM:PFM   10->127 PF02771 * Acyl-CoA_dh_N 1.2e-14 28.3 106/113  
:BLT:SWISS 4->397 ACD10_HUMAN e-115 55.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57115.1 GT:GENE fadE21 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2446362..2447564) GB:FROM 2446362 GB:TO 2447564 GB:DIRECTION - GB:GENE fadE21 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD57115.1 LENGTH 400 SQ:AASEQ MDFSYSARTDDLLDKLELFMDTHVYPAERVYDEQLAAQRDPHAQPPIMRELQAEARAEGLWNLFMTHGGHGAGLTNLEYAPLAEVMGRSLIGNEVFNCSAPDTGNMEILALYGTEAQREQWLKPLLDCSIRSAFAMTEPAVASSDATNIGATIRRDGDHYVLNGRKWYISGILDPDCKLLIFMGKSDPDAPTYRQQSMILVPADTPGIEVLRDLPMFGYHDRLGHGEVQFTDVRVPAENMLGREGDGFAIAQGRLGPGRMHYAMRAVGMAERALELMCRRSLERVAFGQPLAERGVVREWIARSRMEIDQIRLLVLQSAWLMDTKGNAAARAEVAAIKVAAMEVAHRVVDRAVQTFGAAGVSDDTVLARMHAVTRALQIADGPNEVHLRTMARLEVKKYR GT:EXON 1|1-400:0| BL:SWS:NREP 1 BL:SWS:REP 4->397|ACD10_HUMAN|e-115|55.4|392/1059| SEG 328->345|aaaraevaaikvaameva| BL:PDB:NREP 1 BL:PDB:REP 11->397|2wbiA|e-101|48.8|377/394| RP:PDB:NREP 1 RP:PDB:REP 1->394|3d9gB|2e-68|19.1|388/431| RP:PFM:NREP 3 RP:PFM:REP 12->126|PF02771|3e-09|41.3|104/113|Acyl-CoA_dh_N| RP:PFM:REP 133->181|PF02770|2e-09|54.2|48/53|Acyl-CoA_dh_M| RP:PFM:REP 245->393|PF00441|2e-12|29.3|147/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 245->393|PF00441|7.2e-37|35.4|147/150|Acyl-CoA_dh_1| HM:PFM:REP 133->181|PF02770|9.9e-17|54.3|46/52|Acyl-CoA_dh_M| HM:PFM:REP 10->127|PF02771|1.2e-14|28.3|106/113|Acyl-CoA_dh_N| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 1->242|2c0uA2|2e-40|20.8|236/259|e.6.1.1| RP:SCP:REP 245->397|1bucA1|6e-22|31.1|151/151|a.29.3.1| HM:SCP:REP 2->258|1w07A3|2.9e-63|36.9|244/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 245->397|1bucA1|1.1e-39|35.1|151/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 4772 OP:NHOMOORG 684 OP:PATTERN 22----4545654533-122221B96661-7A-----------------------------4341--- 4346P2-2---736MkWGG-GW--aXGGGGGNYahaNZyz3T7W1123-11-556648--DCP1ACMGGID--------3828-----------11---3-334362434--------------------------65555---93-1-1-----------------111-------------66767--1A635555545555555553455545557997911------42-----------------------------------------------------------------------------------------111315444444444423222221-6-3-4-13-881595-17---11-3-51-FBBJ-----1-JCC22-H9JFE66565664533-1181191866N-22213-333434895K6699454486D111111116----664------------------------------FDHC16JB6J779BH87366666D9AAAA4CI5LNgaW-39A7537AAG9CCFU--4----34-------1-1A332OA9-----------765-8-5--77779765---------------------------22-471449512222234422214242142---1-1-------2-3-1--2223233222-2222222212222222221-------13231333332313113-1121111-----------------2111113333-CA-----------------BBC9B7A3543-EEDG5A77B75668323-------------2-----24-223333333333-------2886677----------1-------------------------1--11-1------ ----247-731-AA9BAABB777967BAA586876789897997A98667579B785444443-111--1--1-1------11111---454A3425444766BBC-A64ECOBABC55357C6H92E6Q*B-EAN5543B56F936654A62E7BBAG7CG6DBC36497DFCF-222I42332425B83452B8876 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 400 STR:RPRED 100.0 SQ:SECSTR ccccccHHHHHHHHHHHHHHHHTGGGHHHHHTHHccTcccHHHHHHTTHHHHHHHHHTTTTGGGccGGGTcccccHHHHHHHHHHHHTTccTTHHHHHHHHHHHHHHHHHHcccHHHHHHHTHHHHccccccEEEcccTTccTTTccccccEEEEETTEEEEEEEEEccTTcccccEEEEEEEEcccTTcccGGGEEEEEEcHHHHHTccGGGEEEEEccccccccEEEEEEEEEEGGGccccTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTccccTTTHHHHHHHHHHHTTc DISOP:02AL 400-401| PSIPRED ccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHccccccccHHHHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHccccEEEEEEccccccccccHHHcEEEEEEEccEEEEEcEEEEEccccccccEEEEEEEEccccccccccEEEEEEEcccccEEEEcccccccccccccccEEEEccEEccHHHHccccccHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccc //