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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE27
DDBJ      :fadE27       putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  503/915 : Eukaryota  171/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:381 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->381 2pg0A PDBj 7e-90 46.1 %
:RPS:PDB   9->381 3d9dC PDBj 2e-79 19.9 %
:RPS:SCOP  8->230 1rx0A2  e.6.1.1 * 3e-56 26.8 %
:RPS:SCOP  236->381 1siqA1  a.29.3.1 * 1e-29 15.1 %
:HMM:SCOP  4->246 1w07A3 e.6.1.2 * 3.8e-75 45.0 %
:HMM:SCOP  233->383 1bucA1 a.29.3.1 * 1.5e-42 40.4 %
:RPS:PFM   9->119 PF02771 * Acyl-CoA_dh_N 4e-15 40.5 %
:RPS:PFM   123->174 PF02770 * Acyl-CoA_dh_M 1e-08 40.4 %
:RPS:PFM   233->381 PF00441 * Acyl-CoA_dh_1 6e-20 35.6 %
:HMM:PFM   233->380 PF00441 * Acyl-CoA_dh_1 9.8e-41 38.5 148/150  
:HMM:PFM   9->119 PF02771 * Acyl-CoA_dh_N 4.1e-28 41.4 111/113  
:HMM:PFM   123->174 PF02770 * Acyl-CoA_dh_M 3.4e-22 48.1 52/52  
:BLT:SWISS 10->381 ACADL_PIG 3e-85 44.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57403.1 GT:GENE fadE27 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2724871..2726016 GB:FROM 2724871 GB:TO 2726016 GB:DIRECTION + GB:GENE fadE27 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD57403.1 LENGTH 381 SQ:AASEQ MARAAWSDDEVEAVRELARNFFEKEVVPHEEKFVEQGHPDRHLYNRAGELGLLCTAIPAEYGGGGGTFAHEAAIIEEQTLAGDGALGMPVHSSIIAPYLAEFGSEELKRRVLPKAASGEMVLSIGMTEPGTGSDLQNIKTRAVREGDEYVITGSKIFITNGWLCDGIIIAAKTDPTKGAAGVSLIFAEVGDDTPGFTRGRILSKIGGKGQDTAELFFDGLRVPASNLLGEAEGQGFYQMMQLLAQERLVTAVIAVPMMEKAVQLTVEYTKGREAFGKPLYAMQNTKFELAECATIARVARTFLDDAIVKHLRGELDIPTAAMTKYWITDQLGGVVDRCLQLFGGYGYMTEYPISQLYTGARVLRILAGSNEVMKDLIARSL GT:EXON 1|1-381:0| BL:SWS:NREP 1 BL:SWS:REP 10->381|ACADL_PIG|3e-85|44.7|369/430| BL:PDB:NREP 1 BL:PDB:REP 4->381|2pg0A|7e-90|46.1|375/380| RP:PDB:NREP 1 RP:PDB:REP 9->381|3d9dC|2e-79|19.9|371/430| RP:PFM:NREP 3 RP:PFM:REP 9->119|PF02771|4e-15|40.5|111/113|Acyl-CoA_dh_N| RP:PFM:REP 123->174|PF02770|1e-08|40.4|52/53|Acyl-CoA_dh_M| RP:PFM:REP 233->381|PF00441|6e-20|35.6|149/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 233->380|PF00441|9.8e-41|38.5|148/150|Acyl-CoA_dh_1| HM:PFM:REP 9->119|PF02771|4.1e-28|41.4|111/113|Acyl-CoA_dh_N| HM:PFM:REP 123->174|PF02770|3.4e-22|48.1|52/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 8->230|1rx0A2|3e-56|26.8|220/231|e.6.1.1| RP:SCP:REP 236->381|1siqA1|1e-29|15.1|146/154|a.29.3.1| HM:SCP:REP 4->246|1w07A3|3.8e-75|45.0|240/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 233->383|1bucA1|1.5e-42|40.4|151/151|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 6826 OP:NHOMOORG 704 OP:PATTERN 44----6888A88977-243532D96661-7B-----------------------------4661--- 4556W3-5---846Y*qRR-Rj44ntRRRRRYmlylam**4e8i1133-11-567668--GFW1EFTNINE--------384B-----11111122---41445664555--------------------------67688---B3-2--11---------------122-------------78867--1C735555545555555553455645567CA9B11------52---------------2------1-------------------------------------------------------------------11315444444444423222221-6-314-13-A91599-17---11-3-71-RKKU-----31YLO654THTRLAA9A9AA7978-44C44G4CBAX-5664647668678F9TBACD7777D9I11111111B----9B6-----------------------------1MMVM18UJCSDBDHPCA6BBABBOGFFGGAIRCXXvpj35HIDC6EGGNHJKRb339----56-------212H984aFJ-----------765-B-5--7787DC66------------1--------------32-8E486F914444448A444484A5465---1-1-------3-4-1--2223233222-2222222212222222221-------1333133333231321311121111-----------------6112117777-KD33---------------IIIFICG7B98-NNNPALEGKECFFH869-------------2-----24-226655555555-------2BB98AA----------1-------------------------1--11-1------ ----56A-941-AAADABAD999B89CCC7A89878AA9A8AABCC977799BE8A7867774-1----1--1--------1--11---8B7A8876556999CBC-B75HEVBBFD97889D9JC5I9R*E-EBP6884C79FB4AA67C74EADBBOAGK7ICD777CCFHCH2232Y42254657FA3554F99A9 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 378 STR:RPRED 99.2 SQ:SECSTR ###cTTccHHHHHHHHHHHHHHHHTGGGHHHHHTTccHHTHHHHHHHHHTTTTGGGccGGGTcccccHHHHHHHHHHHHTTccTTHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccEEEEcccTTccTTTTccccEEEEETTEEEEEEEEEccTTTTTTTTEEEEEcccTTccGGGEEEEEEEEcHHHHHTccGGGEEccccTTccccEEEEEEEEEEGGGccccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTcccGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcGGGGcTTccHHHHHHHHTTTTTccccTTTTHHHHHHHH DISOP:02AL 381-382| PSIPRED cccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHHcHHHHHHHHHccHHHHHHHHHccHHHHHHHHHHHccccEEEEEEcccccccccHHHEEEEEEEEccEEEEEEEEEEEEccccccEEEEEEEEccccccccEEEEEEEcccccccEEEEcccccccccccccEEEEEccEEccHHHHccccccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHc //