Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE5
DDBJ :fadE5 putative acyl-CoA dehydrogenase
Swiss-Prot:
Homologs Archaea 14/68 : Bacteria 156/915 : Eukaryota 4/199 : Viruses 0/175 --->[See Alignment]
a.29.3
e.6.1
:351 amino acids
:SECSTR
:PSIPRED
:BLT:PDB 3->339 2z1qB PDBj 2e-13 25.5 %
:RPS:PDB 5->342 3b96A PDBj 6e-26 19.9 %
:RPS:SCOP 14->202 1r2jA2 e.6.1.1 * 7e-11 23.2 %
:RPS:SCOP 238->342 1bucA1 a.29.3.1 * 2e-13 28.8 %
:HMM:SCOP 3->206 1ivhA2 e.6.1.1 * 1.5e-22 33.0 %
:HMM:SCOP 206->351 1r2jA1 a.29.3.1 * 2e-28 28.8 %
:RPS:PFM 234->333 PF00441 * Acyl-CoA_dh_1 1e-07 32.3 %
:HMM:PFM 220->338 PF00441 * Acyl-CoA_dh_1 5.9e-24 29.8 114/150
:HMM:PFM 5->115 PF02771 * Acyl-CoA_dh_N 3.3e-20 37.0 108/113
:BLT:SWISS 5->333 ACDP_MYCTU 4e-13 32.6 %
:PROS 1->75|PS00430|TONB_DEPENDENT_REC_1
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55321.1
GT:GENE fadE5
GT:PRODUCT putative acyl-CoA dehydrogenase
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION complement(494196..495251)
GB:FROM 494196
GB:TO 495251
GB:DIRECTION -
GB:GENE fadE5
GB:PRODUCT putative acyl-CoA dehydrogenase
GB:PROTEIN_ID BAD55321.1
LENGTH 351
SQ:AASEQ MSESELKEFADSVRALLGKHAQPAAVRAAMDTDLGYDPALWRLLCEQIGVAALAIPEEYGGIGASLVESLLVVGELGRTLAGVPMLGSAVLGAQALLLSGDDEACARLLPEVAEGGRTLAVCWAGPRGWDEPGVRAGGESLSGTAHYVLDAAGAGTLIVVTTEGLFEVAADAEGVARRVVPTLDPTRKLAEITFAEVPARRLGTGDPAPVMARLREVAWAAVAAEQVGAAQRCLEMTVEYTKSRVQFGRPIGSFQALKHRMADMYVLVESAKSASRLATESVATGAESAAEDVWVARAQCSRAFTDVVAETVQMHGGIAITWEHDAHLFFKRAHGDAQLFGPARRPLPLTA
GT:EXON 1|1-351:0|
BL:SWS:NREP 1
BL:SWS:REP 5->333|ACDP_MYCTU|4e-13|32.6|319/389|
PROS 1->75|PS00430|TONB_DEPENDENT_REC_1|PDOC00354|
SEG 65->77|slvesllvvgelg|
SEG 212->232|arlrevawaavaaeqvgaaqr|
BL:PDB:NREP 1
BL:PDB:REP 3->339|2z1qB|2e-13|25.5|330/549|
RP:PDB:NREP 1
RP:PDB:REP 5->342|3b96A|6e-26|19.9|337/554|
RP:PFM:NREP 1
RP:PFM:REP 234->333|PF00441|1e-07|32.3|99/150|Acyl-CoA_dh_1|
HM:PFM:NREP 2
HM:PFM:REP 220->338|PF00441|5.9e-24|29.8|114/150|Acyl-CoA_dh_1|
HM:PFM:REP 5->115|PF02771|3.3e-20|37.0|108/113|Acyl-CoA_dh_N|
GO:PFM:NREP 2
GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090|
GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090|
RP:SCP:NREP 2
RP:SCP:REP 14->202|1r2jA2|7e-11|23.2|185/209|e.6.1.1|
RP:SCP:REP 238->342|1bucA1|2e-13|28.8|104/151|a.29.3.1|
HM:SCP:REP 3->206|1ivhA2|1.5e-22|33.0|203/0|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like|
HM:SCP:REP 206->351|1r2jA1|2e-28|28.8|146/153|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like|
OP:NHOMO 593
OP:NHOMOORG 174
OP:PATTERN -------222222221--------4223---3------------------------------------ ----6------1-17GB55-5B--BB555558DCGC8DGG1C1E----------------324-2222-21--------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------1---------------1---------------------1-------1------4445-------534---425431111-111111---1--1-11-6-----1-1111--1-16211-------2--------1----11-------------------------------5575--1-112224622222222322222225264ACA--1111-243313234-------------------11--3-----------------2-----------------------------------------------14--1--11-3------4---1---------------------------------------------------------------------------------------------------------1-----1-----------------------1-----1111-1--1----1---------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------1-------------------------------------------------------2----1-------------------1---------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 340
STR:RPRED 96.9
SQ:SECSTR ##cHHHHHHHHHHHHHHHHHHHHTccHHHHHHHTcccHHHHHHHHHHTTTTcTTccGGGTcccccHHHHHHHHHHHHHHcHHHHHHHHHTTTTHHHHHHccHHHHHHHHHHHHTTcccEEEEcccTccEEEEcTTccEEEEEEEEEEEETTTTccEEEEEEEcTEEEEEGGGccEEEcccccccccTTcEEEEEEEEEGGGEEcTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEETTEEGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHccTTcHHHHHHHHGGGGTcccc#########
PSIPRED ccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEEEEEEcccccccccccccccEEEccEEEEEcccccccEEEEEEccccEEcccccccEEEEEEEcccccccEEEEEEEcccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHcc
//
[GTOP]
