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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE5
DDBJ      :fadE5        putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  156/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:351 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->339 2z1qB PDBj 2e-13 25.5 %
:RPS:PDB   5->342 3b96A PDBj 6e-26 19.9 %
:RPS:SCOP  14->202 1r2jA2  e.6.1.1 * 7e-11 23.2 %
:RPS:SCOP  238->342 1bucA1  a.29.3.1 * 2e-13 28.8 %
:HMM:SCOP  3->206 1ivhA2 e.6.1.1 * 1.5e-22 33.0 %
:HMM:SCOP  206->351 1r2jA1 a.29.3.1 * 2e-28 28.8 %
:RPS:PFM   234->333 PF00441 * Acyl-CoA_dh_1 1e-07 32.3 %
:HMM:PFM   220->338 PF00441 * Acyl-CoA_dh_1 5.9e-24 29.8 114/150  
:HMM:PFM   5->115 PF02771 * Acyl-CoA_dh_N 3.3e-20 37.0 108/113  
:BLT:SWISS 5->333 ACDP_MYCTU 4e-13 32.6 %
:PROS 1->75|PS00430|TONB_DEPENDENT_REC_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55321.1 GT:GENE fadE5 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(494196..495251) GB:FROM 494196 GB:TO 495251 GB:DIRECTION - GB:GENE fadE5 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD55321.1 LENGTH 351 SQ:AASEQ MSESELKEFADSVRALLGKHAQPAAVRAAMDTDLGYDPALWRLLCEQIGVAALAIPEEYGGIGASLVESLLVVGELGRTLAGVPMLGSAVLGAQALLLSGDDEACARLLPEVAEGGRTLAVCWAGPRGWDEPGVRAGGESLSGTAHYVLDAAGAGTLIVVTTEGLFEVAADAEGVARRVVPTLDPTRKLAEITFAEVPARRLGTGDPAPVMARLREVAWAAVAAEQVGAAQRCLEMTVEYTKSRVQFGRPIGSFQALKHRMADMYVLVESAKSASRLATESVATGAESAAEDVWVARAQCSRAFTDVVAETVQMHGGIAITWEHDAHLFFKRAHGDAQLFGPARRPLPLTA GT:EXON 1|1-351:0| BL:SWS:NREP 1 BL:SWS:REP 5->333|ACDP_MYCTU|4e-13|32.6|319/389| PROS 1->75|PS00430|TONB_DEPENDENT_REC_1|PDOC00354| SEG 65->77|slvesllvvgelg| SEG 212->232|arlrevawaavaaeqvgaaqr| BL:PDB:NREP 1 BL:PDB:REP 3->339|2z1qB|2e-13|25.5|330/549| RP:PDB:NREP 1 RP:PDB:REP 5->342|3b96A|6e-26|19.9|337/554| RP:PFM:NREP 1 RP:PFM:REP 234->333|PF00441|1e-07|32.3|99/150|Acyl-CoA_dh_1| HM:PFM:NREP 2 HM:PFM:REP 220->338|PF00441|5.9e-24|29.8|114/150|Acyl-CoA_dh_1| HM:PFM:REP 5->115|PF02771|3.3e-20|37.0|108/113|Acyl-CoA_dh_N| GO:PFM:NREP 2 GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 14->202|1r2jA2|7e-11|23.2|185/209|e.6.1.1| RP:SCP:REP 238->342|1bucA1|2e-13|28.8|104/151|a.29.3.1| HM:SCP:REP 3->206|1ivhA2|1.5e-22|33.0|203/0|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 206->351|1r2jA1|2e-28|28.8|146/153|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 593 OP:NHOMOORG 174 OP:PATTERN -------222222221--------4223---3------------------------------------ ----6------1-17GB55-5B--BB555558DCGC8DGG1C1E----------------324-2222-21--------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------1---------------1---------------------1-------1------4445-------534---425431111-111111---1--1-11-6-----1-1111--1-16211-------2--------1----11-------------------------------5575--1-112224622222222322222225264ACA--1111-243313234-------------------11--3-----------------2-----------------------------------------------14--1--11-3------4---1---------------------------------------------------------------------------------------------------------1-----1-----------------------1-----1111-1--1----1---------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------1-------------------------------------------------------2----1-------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 340 STR:RPRED 96.9 SQ:SECSTR ##cHHHHHHHHHHHHHHHHHHHHTccHHHHHHHTcccHHHHHHHHHHTTTTcTTccGGGTcccccHHHHHHHHHHHHHHcHHHHHHHHHTTTTHHHHHHccHHHHHHHHHHHHTTcccEEEEcccTccEEEEcTTccEEEEEEEEEEEETTTTccEEEEEEEcTEEEEEGGGccEEEcccccccccTTcEEEEEEEEEGGGEEcTcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEETTEEGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHccTTcHHHHHHHHGGGGTcccc######### PSIPRED ccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccHHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccccEEEEEEEcccccccccccccccEEEccEEEEEcccccccEEEEEEccccEEcccccccEEEEEEEcccccccEEEEEEEcccHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHccHHHHHHHcc //