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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE6
DDBJ      :fadE6        putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  147/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:342 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   215->321 1ukwA PDBj 9e-10 40.2 %
:RPS:PDB   5->321 3d6bA PDBj 3e-15 18.1 %
:RPS:SCOP  1->139 2c0uA2  e.6.1.1 * 5e-12 13.7 %
:RPS:SCOP  215->324 1bucA1  a.29.3.1 * 2e-13 29.1 %
:HMM:SCOP  1->123 2c12A2 e.6.1.1 * 4.9e-18 33.3 %
:HMM:SCOP  182->332 1r2jA1 a.29.3.1 * 1.9e-33 40.4 %
:RPS:PFM   216->300 PF00441 * Acyl-CoA_dh_1 1e-07 42.9 %
:HMM:PFM   188->328 PF00441 * Acyl-CoA_dh_1 4.7e-29 36.9 141/150  
:HMM:PFM   6->117 PF02771 * Acyl-CoA_dh_N 3.4e-17 27.5 109/113  
:BLT:SWISS 1->86 ACADL_RAT 4e-04 32.1 %
:BLT:SWISS 218->321 ACDC_BACSU 2e-11 31.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55322.1 GT:GENE fadE6 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(495248..496276) GB:FROM 495248 GB:TO 496276 GB:DIRECTION - GB:GENE fadE6 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD55322.1 LENGTH 342 SQ:AASEQ MRFALSPEQADFAASVRKLLDAGRTPAAVRAWAAGDREPGRALLGQLAEQGVLGLAIDEDNGGMGAEPIDLVVAFVELGRAAAPGPLVESAAAIPALLQALPDADAAQRWLPGIAEGSALATISFESAGTTVALDAEAADVVFVVSGDRVTVGRATGEVRSVDPARRLSTVEPGETVAEGEPARAAVARAFDAGVLACAAQQLGAGRALLHAATEYAKQRKQFGRPIGEFQAVKQKLADVLIALDLAEPLLYRAALTFDEPSRERDVSAAAVACGDAAYTAARAALQVHGAIGYTAEYDLSLWLTKVTALRSAWGTADVHRGRIARALREEALRERALRGTA GT:EXON 1|1-342:0| BL:SWS:NREP 2 BL:SWS:REP 1->86|ACADL_RAT|4e-04|32.1|84/430| BL:SWS:REP 218->321|ACDC_BACSU|2e-11|31.7|104/380| SEG 91->108|aaaipallqalpdadaaq| SEG 178->213|aegeparaavarafdagvlacaaqqlgagrallhaa| SEG 269->282|aaavacgdaaytaa| SEG 325->339|aralreealreralr| BL:PDB:NREP 1 BL:PDB:REP 215->321|1ukwA|9e-10|40.2|107/379| RP:PDB:NREP 1 RP:PDB:REP 5->321|3d6bA|3e-15|18.1|315/374| RP:PFM:NREP 1 RP:PFM:REP 216->300|PF00441|1e-07|42.9|84/150|Acyl-CoA_dh_1| HM:PFM:NREP 2 HM:PFM:REP 188->328|PF00441|4.7e-29|36.9|141/150|Acyl-CoA_dh_1| HM:PFM:REP 6->117|PF02771|3.4e-17|27.5|109/113|Acyl-CoA_dh_N| GO:PFM:NREP 2 GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 1->139|2c0uA2|5e-12|13.7|139/259|e.6.1.1| RP:SCP:REP 215->324|1bucA1|2e-13|29.1|110/151|a.29.3.1| HM:SCP:REP 1->123|2c12A2|4.9e-18|33.3|123/0|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 182->332|1r2jA1|1.9e-33|40.4|151/153|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 270 OP:NHOMOORG 149 OP:PATTERN -----------------------11------------------------------------------- --1-----------36422-25--5622222546562566-5-2----------------111-1-11-1--------------------------------------------------------------------------------------------------------------------------1111111-1111111111111-111113312--------1------------------------------------------------------------------------------------------------1111111-1---------------------------------------1332-------321---11112--------------1--1----1---------------12---------11--------1------1------------------------------2421-----2-1124111111112-1111113113755--111--1--121-13-----------------------21------------1-1-1----11-11-1-------------------------------------2--------1------1---------------------------------------------------------------------------------------------------------------------------------------------------1--1------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 324 STR:RPRED 94.7 SQ:SECSTR GGGGccHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTTcccTTHHHHHHTTTcccTTccGGGTcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHTTHHHHHHHccHHHHHHHHHHHTcccEEEEcccccccEEETGGGccEEEEEEEETTcTTEEccEEccccccTTccEEEEGGGccTTccTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEETTEEGGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccGGGHHHHHHHHHHHHHHccHHHHHHHHHH################## DISOP:02AL 334-342| PSIPRED ccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccEEEEEEccccccccccEEEEcccEEEEEccEEEEcccccccccccccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHcHHHccccc //