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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE7
DDBJ      :fadE7        putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  500/915 : Eukaryota  162/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:380 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->371 2pg0B PDBj 1e-19 28.9 %
:RPS:PDB   1->376 1egcA PDBj 9e-57 22.3 %
:RPS:SCOP  1->228 1rx0A2  e.6.1.1 * 3e-36 21.5 %
:RPS:SCOP  230->372 1bucA1  a.29.3.1 * 5e-16 21.7 %
:HMM:SCOP  1->228 2c12A2 e.6.1.1 * 6.3e-60 37.9 %
:HMM:SCOP  230->374 1ukwA1 a.29.3.1 * 4.8e-21 32.4 %
:RPS:PFM   42->120 PF02771 * Acyl-CoA_dh_N 2e-04 36.7 %
:RPS:PFM   124->175 PF02770 * Acyl-CoA_dh_M 7e-06 46.2 %
:RPS:PFM   230->372 PF00441 * Acyl-CoA_dh_1 1e-08 36.6 %
:HMM:PFM   230->372 PF00441 * Acyl-CoA_dh_1 9.2e-21 30.8 143/150  
:HMM:PFM   124->175 PF02770 * Acyl-CoA_dh_M 1.5e-18 46.2 52/52  
:HMM:PFM   8->120 PF02771 * Acyl-CoA_dh_N 3.4e-17 30.0 110/113  
:BLT:SWISS 11->372 ACDP_MYCTU 3e-21 28.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55323.1 GT:GENE fadE7 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(496273..497415) GB:FROM 496273 GB:TO 497415 GB:DIRECTION - GB:GENE fadE7 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD55323.1 LENGTH 380 SQ:AASEQ MDLELDQAAQDFQREVREFLAANKPAQPLPSMDTKAGFEAHRDWERTLAEARFSVVSWPREYGGRDASLLEWVLFEQEYYAAQAPGRVSQNGIFLLAPTLFEHGTPEQLDRIMPRMARGDDIWAQAWSEPEAGSDLAGIRSTARRTEGGWLLSGQKTWSSRASFADWAFGLFRSDPEAERHKGLTYVMFPLTAEGVSVRPIPQLDGEPGFAEIFLDDVFVPDQDVIGAPGEGWRVAMSTSSNERGLSLRSPGRFTATASRLIDLWLERGERTDTAQRDAVVDAWIRSEAYRLHTFGTVTRLNEGGKLGAESSITKVFWSELDIAMHETALDVLGADAELAGRWTDGYLFALSGPIYAGTNEIQRNIIAERLLGLPRGSSR GT:EXON 1|1-380:0| BL:SWS:NREP 1 BL:SWS:REP 11->372|ACDP_MYCTU|3e-21|28.0|354/389| BL:PDB:NREP 1 BL:PDB:REP 12->371|2pg0B|1e-19|28.9|349/377| RP:PDB:NREP 1 RP:PDB:REP 1->376|1egcA|9e-57|22.3|373/387| RP:PFM:NREP 3 RP:PFM:REP 42->120|PF02771|2e-04|36.7|79/113|Acyl-CoA_dh_N| RP:PFM:REP 124->175|PF02770|7e-06|46.2|52/53|Acyl-CoA_dh_M| RP:PFM:REP 230->372|PF00441|1e-08|36.6|134/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 230->372|PF00441|9.2e-21|30.8|143/150|Acyl-CoA_dh_1| HM:PFM:REP 124->175|PF02770|1.5e-18|46.2|52/52|Acyl-CoA_dh_M| HM:PFM:REP 8->120|PF02771|3.4e-17|30.0|110/113|Acyl-CoA_dh_N| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 1->228|1rx0A2|3e-36|21.5|223/231|e.6.1.1| RP:SCP:REP 230->372|1bucA1|5e-16|21.7|143/151|a.29.3.1| HM:SCP:REP 1->228|2c12A2|6.3e-60|37.9|227/0|e.6.1.1|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 230->374|1ukwA1|4.8e-21|32.4|145/0|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 4407 OP:NHOMOORG 692 OP:PATTERN 22----5566866756-232321A75561-68-----------------------------2331--- 4334R1-2---523JvYFF-Fa11ZcFFFFFRdgqgNZu*3a8d--22----2-1332--EEQ19AJHDID--------241A-----------11---31223232412--------------------------55566---63---1-------------------1-------------44355---9635555545555555553455545557997A-1------42------------------------------------------------------------------------------------------11315444444444413112221-6-3-3-12-661475-17---11-3-41-GCCM-----1-LEF222G8HED66655663643-2262292766Q--33131422333873J5679343374C111111115----773------------------------------FGMF16KB7K88ACJ97477777HBBBBB5CJ6PRcbV-39A8528AAI8DDHQ--6----22-------1-1E64-L87-----------654-4-5--66658654---------------------------32-3825558-2433331733323282255----2--------31511113334344333-333333332333333333211111112434234433242422411222222--1111111-1111---4111114444-9A-----------------DDC8D7835521A9AC6E8887779A4241-1-1-11--1--3--1--43-111111111222------11553344------------------------------------1--11-1------ ----126-311-337957655558456442536555676667746454244679673332223--------------------------69556764545555888-721DAF67853252483B8173Fl8-87F3413733B61332473184798G58D4C8836487BC9B1111I--13232285232-44443 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 377 STR:RPRED 99.2 SQ:SECSTR ccccccHHHHHHHHHHHHHHHHHHTTTTHHHHHHHccccccHHHHHHHHHHTcccTTccTTTTcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHTccccEEEEcccTTccccGGGcccEEEEcccEEEEEEEEEEEETGGGccEEEEEEEccTTccHHHHEEEEEEETTcTTEEEcccccccccTTEEEEEEEEEEEEGGGccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccccccGHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGcTTHHHHHHHHHGGGGTTTccHHHHHHHHHHHHHHTTcH### DISOP:02AL 378-380| PSIPRED ccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHccccccHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHcHHHHcccEEEHEEEcccccccccccccEEEEEEccEEEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEEEcccccEEEcccHHHcccccccEEEEEcEEEcHHHccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccc //