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Nocardia farcinica IFM 10152 (nfar0)
Gene : fadE8
DDBJ      :fadE8        putative acyl-CoA dehydrogenase
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  505/915 : Eukaryota  164/199 : Viruses  0/175   --->[See Alignment]
a.29.3e.6.1
:396 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   64->387 2pg0B PDBj 3e-27 30.6 %
:RPS:PDB   17->392 1egcA PDBj 2e-54 23.4 %
:RPS:SCOP  58->242 1r2jA2  e.6.1.1 * 7e-39 29.2 %
:RPS:SCOP  242->388 1bucA1  a.29.3.1 * 3e-15 22.5 %
:HMM:SCOP  8->255 1w07A3 e.6.1.2 * 7.4e-67 37.2 %
:HMM:SCOP  242->390 1ukwA1 a.29.3.1 * 1.9e-20 35.2 %
:RPS:PFM   58->126 PF02771 * Acyl-CoA_dh_N 4e-07 46.4 %
:RPS:PFM   140->187 PF02770 * Acyl-CoA_dh_M 6e-08 56.2 %
:RPS:PFM   242->388 PF00441 * Acyl-CoA_dh_1 5e-07 36.6 %
:HMM:PFM   242->388 PF00441 * Acyl-CoA_dh_1 9.8e-27 33.8 142/150  
:HMM:PFM   15->128 PF02771 * Acyl-CoA_dh_N 6.9e-23 37.1 105/113  
:HMM:PFM   136->186 PF02770 * Acyl-CoA_dh_M 1e-21 45.1 51/52  
:BLT:SWISS 58->388 ACADS_PONAB 2e-26 30.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55326.1 GT:GENE fadE8 GT:PRODUCT putative acyl-CoA dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 499952..501142 GB:FROM 499952 GB:TO 501142 GB:DIRECTION + GB:GENE fadE8 GB:PRODUCT putative acyl-CoA dehydrogenase GB:PROTEIN_ID BAD55326.1 LENGTH 396 SQ:AASEQ MVAIQTSESGTAAQDAAFCAEVREWLAENLDGEFRELRGLGGPGREHEAFDERLAWDRHLAAAGWTCLGWPKEYGGREASVRQQVIFHEEYARANAPARVSHVGEELLGPTLLAFGTEAQKQRFLPGIRTVSELWCQGYSEPGAGSDLAAITTAAHLDGDQWSINGQKIWTSLAHVADWCFVVARTEKGSSRHKGLSYLLVPMKQPGVEVRPIIQLTGTSEFNEVFFDDARTDADLVVGEPGDGWKVAMGTLAVERGISTLGQQIRFARELADIEALARRTGAADDPLIADRIDRAWVGLRVLRAHALRTMEGGGIDESGQASVAKLLWANWHRGLGELAMAVRGAEGLVAGEGDLDEWQRLYLFTRADTIYGGSNEVQRNIIAERVLGLPREARP GT:EXON 1|1-396:0| BL:SWS:NREP 1 BL:SWS:REP 58->388|ACADS_PONAB|2e-26|30.1|326/412| SEG 30->46|ldgefrelrglggpgre| BL:PDB:NREP 1 BL:PDB:REP 64->387|2pg0B|3e-27|30.6|307/377| RP:PDB:NREP 1 RP:PDB:REP 17->392|1egcA|2e-54|23.4|363/387| RP:PFM:NREP 3 RP:PFM:REP 58->126|PF02771|4e-07|46.4|69/113|Acyl-CoA_dh_N| RP:PFM:REP 140->187|PF02770|6e-08|56.2|48/53|Acyl-CoA_dh_M| RP:PFM:REP 242->388|PF00441|5e-07|36.6|131/150|Acyl-CoA_dh_1| HM:PFM:NREP 3 HM:PFM:REP 242->388|PF00441|9.8e-27|33.8|142/150|Acyl-CoA_dh_1| HM:PFM:REP 15->128|PF02771|6.9e-23|37.1|105/113|Acyl-CoA_dh_N| HM:PFM:REP 136->186|PF02770|1e-21|45.1|51/52|Acyl-CoA_dh_M| GO:PFM:NREP 6 GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02771|IPR006092| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02771|IPR006092| GO:PFM GO:0003995|"GO:acyl-CoA dehydrogenase activity"|PF02770|IPR006091| GO:PFM GO:0055114|"GO:oxidation reduction"|PF02770|IPR006091| GO:PFM GO:0016627|"GO:oxidoreductase activity, acting on the CH-CH group of donors"|PF00441|IPR006090| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00441|IPR006090| RP:SCP:NREP 2 RP:SCP:REP 58->242|1r2jA2|7e-39|29.2|178/209|e.6.1.1| RP:SCP:REP 242->388|1bucA1|3e-15|22.5|142/151|a.29.3.1| HM:SCP:REP 8->255|1w07A3|7.4e-67|37.2|239/0|e.6.1.2|1/1|Acyl-CoA dehydrogenase NM domain-like| HM:SCP:REP 242->390|1ukwA1|1.9e-20|35.2|145/0|a.29.3.1|1/1|Acyl-CoA dehydrogenase C-terminal domain-like| OP:NHOMO 5146 OP:NHOMOORG 698 OP:PATTERN 22----4777977866-132421B86661-7A-----------------------------245---- 4435R2-2---534R*fKK-Kf22ekKKKKKTkkvkRh**4b8g1113----434535--FES1BDNGDKD--------2629--------11122---31344454445--------------------------54466---93-1-1------------------12-------------66655---9635555545555555553455545557998A11------42------------------------------------------------------------------------------------------11315444444444423222221-6-3-4-13-981585-17---11-3-61-KGGP-----2-PHH333KBLKH77676774644-2262292A76R-2332313334246A5N799A554587C111111117----874------------------------------HGQJ16LE9N88ACJ96144466GA66663AI6RRhfY149B8749DDI9BDJT--7----23-------212E653P99-----------755-8-5--77679755---------------------------33-482448913433343733334384343----2--------314-1113334344333-3333333323333333332111--112434234433242422411222222--1111111-1111---4112115555-AA1----------------CCA8C7957631EEEF5E8AA87789435-------------2-----24-223344444444------12885566------------------------------------1--11-1------ ----345-521-897978786667569664646656776767757764444678553434443--------------------------46675654445565AB9-A53GBO9AB753437B6GA2E7O*D-DAJ4932B57E735445B52D9CAAJ7BE6FBA46597CEAE-112I42322445851142A7887 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 384 STR:RPRED 97.0 SQ:SECSTR ############HHHHHHHHHHHHHHHHHTTTTHHHHHHTccEEEEHccccHcHHHHHHHHHHTcccTTccTTTTcccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHTccccEEEEcccTTccccGGGcccEEEEcccEEEEEEEEEEEETGGGccEEEEEEEccTTccHHHHEEEEEEETTcTTEEEcccccccccccEEEEEEEEEEEEGGGccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTcccGGcHHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGcTTcHHHTcHHHHHHHHGGGGTTTccHHHHHHHHHHHHHHTTcHHHc DISOP:02AL 392-396| PSIPRED ccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccccHHHHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccHHHHHHHcHHHHcccHHHHEEEccccccccccccEEEEEEEccEEEEEEEEEEEEccccccEEEEEEEEcccccccccEEEEEEEcccccEEEcccHHccccccccEEEEccEEEcHHHHcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHccHHcccccHHHHHHHHHHHHHHcccccccc //