[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : folC
DDBJ      :folC         putative folylpolyglutamate synthetase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  836/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
c.59.1c.72.2
:493 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   56->456 2vorA PDBj e-114 60.6 %
:RPS:PDB   69->456 1e8cB PDBj 5e-30 12.5 %
:RPS:SCOP  48->343 1o5zA2  c.72.2.2 * 2e-47 31.0 %
:RPS:SCOP  346->456 1gqqA2  c.59.1.1 * 2e-11 8.1 %
:HMM:SCOP  33->346 1o5zA2 c.72.2.2 * 1.5e-88 46.3 %
:HMM:SCOP  347->490 1o5zA1 c.59.1.2 * 6e-29 35.4 %
:RPS:PFM   167->254 PF08245 * Mur_ligase_M 6e-07 54.3 %
:RPS:PFM   332->422 PF04198 * Sugar-bind 2e-04 36.4 %
:HMM:PFM   80->319 PF08245 * Mur_ligase_M 1.7e-18 30.0 180/188  
:HMM:PFM   346->423 PF02875 * Mur_ligase_C 4e-12 21.8 78/91  
:BLT:SWISS 60->422 FOLC_LACCA 4e-40 33.4 %
:PROS 180->195|PS01012|FOLYLPOLYGLU_SYNT_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56194.1 GT:GENE folC GT:PRODUCT putative folylpolyglutamate synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1513039..1514520 GB:FROM 1513039 GB:TO 1514520 GB:DIRECTION + GB:GENE folC GB:PRODUCT putative folylpolyglutamate synthetase GB:PROTEIN_ID BAD56194.1 LENGTH 493 SQ:AASEQ MSEDSAPGANPEPERQYRDDGTGARLGSGPSPVELAEMALVEAELDQRWPETKIEPSLTRIATLMDLLGSPQQAYPAIHIAGTNGKTSVTRMIDALLTALHRRTGRIISPHLQLATERISIDNAPISPAKYVETYREIQPYVEMIDQQSAAVGGPAMSKFEVLTGMAYAAFAETPVDVAVVETGMGGTWDATNVIDGQVAVITPIGLDHTEYLGPDLASIAGEKAGIIKRAPESLVPRDTVAVIAQQEPEAMEVLLRRAVEVDAAVAREGAEFTVLSRRIAVGGQQLELQGLGGVYDEIFLPLHGEHQARNAVLALAAVEAFFGAGAQRQLDVEAVRAGFAAVASPGRMERMRSAPSIFVDAAHNPAGARALATTISTEFDFRKLVGVIAVLGDKDAAGILEALEPVFDEIVVTTNGSPRALEIDALADLAVQRFGDERVVTAQTLPDALETAIALAEEVGESGEMVSGAGVVVTGSVVTAGAARALFGKDPA GT:EXON 1|1-493:0| BL:SWS:NREP 1 BL:SWS:REP 60->422|FOLC_LACCA|4e-40|33.4|350/428| PROS 180->195|PS01012|FOLYLPOLYGLU_SYNT_2|PDOC00773| SEG 33->45|velaemalveael| SEG 257->272|rravevdaavaregae| SEG 283->294|ggqqlelqglgg| SEG 312->327|avlalaaveaffgaga| SEG 457->484|aeevgesgemvsgagvvvtgsvvtagaa| BL:PDB:NREP 1 BL:PDB:REP 56->456|2vorA|e-114|60.6|391/442| RP:PDB:NREP 1 RP:PDB:REP 69->456|1e8cB|5e-30|12.5|321/484| RP:PFM:NREP 2 RP:PFM:REP 167->254|PF08245|6e-07|54.3|81/187|Mur_ligase_M| RP:PFM:REP 332->422|PF04198|2e-04|36.4|88/254|Sugar-bind| HM:PFM:NREP 2 HM:PFM:REP 80->319|PF08245|1.7e-18|30.0|180/188|Mur_ligase_M| HM:PFM:REP 346->423|PF02875|4e-12|21.8|78/91|Mur_ligase_C| GO:PFM:NREP 4 GO:PFM GO:0005524|"GO:ATP binding"|PF08245|IPR013221| GO:PFM GO:0009058|"GO:biosynthetic process"|PF08245|IPR013221| GO:PFM GO:0030246|"GO:carbohydrate binding"|PF04198|IPR007324| GO:PFM GO:0030528|"GO:transcription regulator activity"|PF04198|IPR007324| RP:SCP:NREP 2 RP:SCP:REP 48->343|1o5zA2|2e-47|31.0|271/284|c.72.2.2| RP:SCP:REP 346->456|1gqqA2|2e-11|8.1|111/154|c.59.1.1| HM:SCP:REP 33->346|1o5zA2|1.5e-88|46.3|296/296|c.72.2.2|1/1|MurD-like peptide ligases, catalytic domain| HM:SCP:REP 347->490|1o5zA1|6e-29|35.4|127/137|c.59.1.2|1/1|MurD-like peptide ligases, peptide-binding domain| OP:NHOMO 1322 OP:NHOMOORG 1028 OP:PATTERN ------------------------21111111-----------------------------111---- 1111111111111111111-11111-11111111111111112111111111111111111111111111111111111111-1111111111111---11111111111--------------11111-111111111111111211112211111-11111111211111111111-11111212211121111111111111111111111111111121111111111111111111111111111111111211221212222112113211111112111222222222222222222222222222222222222111211111111111111111111111111111111111111111111212111111111111111111111122211111111111-21111111111121111111111111112111111111111111111-11-111111111111111111111111111111-11111111111111111111111111111111-1111111111111121111111111111111111111111111111-11111111-1111111111111111111111-11111111111111111111-11111111111-1111111111111111-1-11111-1111111-11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111--------11111111111111111111111111111111111--11--------111--1-1---1--------1-------1211111111121 11--111-311-2223322244334323353334333323332121543333432332232122222222222223313322222222-23232232222222223-1-12111-1211-11112-13-8D2-211-1-111-3-111111--11111223212111221133111111A3122232262652121221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 447 STR:RPRED 90.7 SQ:SECSTR #############################################TTHHHHHHEcccHHHHHHHHHHHcHHHHHHHHHHHHHHTTccEEEcTTccEETTcccccccccccHHHHHccTTHHHHHHHTcTTHHHHHHHHHHHHHHHHHHHHTccccccccEEEcccHHHHHHHHHTTccEEEEccHHHHHTTTTTTcccEEEEcccccccHHHHccHHHHHHHHHHHcEETccTccTccccEEEEETTcHHHHHHHTTcTTcEEEEcccccTTTEEEEEEEEEccccEEEEEEETTccEEEEEcccHHHHHHHHHHHHHHHHTTccHHHTTcHHHHHHHGGGccccTTcEEEccTTcEEEEEccccHHHHHHHHHHHHHTccccEEEEEccccccccTHHHHHHHHHHHccEEEEccccccTccHHHHHHHHHTTccETTccEEccHHHHHHHHHHcHHHHHTcTTTTccEEEEEEccHHHHHHHHHHTTccc# DISOP:02AL 1-4, 492-493| PSIPRED cccccccccccccHHHHHHcccccEEccHHHHHHHHHHHHHHHHHHHHccEEEEcccHHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEcccEEEEccccEEEccEEccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHccccccEEEEEcccHHHHHHHcccHHHHHHHHHHHHHccHHHccccccEEEEccccHHHHHHHHHHHHEEEEEEEEEcccEEEEEEEEccccEEEEEEEcccEEccccccccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccEEEEEEccccEEEEEccccHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHccEEEEEcccccccccHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHccccccccccEEEEEccHHHHHHHHHHHccccc //