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Nocardia farcinica IFM 10152 (nfar0)
Gene : gcvH
DDBJ      :gcvH         putative glycine cleavage system protein
Swiss-Prot:GCSH_NOCFA   RecName: Full=Glycine cleavage system H protein;

Homologs  Archaea  32/68 : Bacteria  673/915 : Eukaryota  172/199 : Viruses  0/175   --->[See Alignment]
b.84.1
:132 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->130 3hgbA PDBj 2e-40 58.5 %
:RPS:PDB   2->131 2edgA PDBj 2e-12 34.4 %
:RPS:SCOP  2->131 1dxmA  b.84.1.1 * 3e-13 34.4 %
:HMM:SCOP  3->134 1onlA_ b.84.1.1 * 9.9e-36 48.0 %
:RPS:PFM   8->130 PF01597 * GCV_H 2e-25 52.1 %
:HMM:PFM   8->114 PF01597 * GCV_H 1.9e-38 48.6 107/122  
:BLT:SWISS 1->132 GCSH_NOCFA 3e-72 100.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57332.1 GT:GENE gcvH GT:PRODUCT putative glycine cleavage system protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2646661..2647059 GB:FROM 2646661 GB:TO 2647059 GB:DIRECTION + GB:GENE gcvH GB:PRODUCT putative glycine cleavage system protein GB:PROTEIN_ID BAD57332.1 LENGTH 132 SQ:AASEQ MAVTPEDLRYTEEHEWVRRIGPTRVRVGITDYAQSQLGDVVYVQLPDEQREAAAGESIAEVESTKSVSDIYAPLAAKVVAVNEELSNAPETLNADPYGAGWLFELEVADAAALDVTLGELLDAAGYQGVIGG GT:EXON 1|1-132:0| SW:ID GCSH_NOCFA SW:DE RecName: Full=Glycine cleavage system H protein; SW:GN Name=gcvH; OrderedLocusNames=NFA_24850; SW:KW Complete proteome; Lipoyl. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->132|GCSH_NOCFA|3e-72|100.0|132/132| GO:SWS:NREP 1 GO:SWS GO:0031405|"GO:lipoic acid binding"|Lipoyl| BL:PDB:NREP 1 BL:PDB:REP 1->130|3hgbA|2e-40|58.5|130/134| RP:PDB:NREP 1 RP:PDB:REP 2->131|2edgA|2e-12|34.4|125/130| RP:PFM:NREP 1 RP:PFM:REP 8->130|PF01597|2e-25|52.1|119/121|GCV_H| HM:PFM:NREP 1 HM:PFM:REP 8->114|PF01597|1.9e-38|48.6|107/122|GCV_H| GO:PFM:NREP 3 GO:PFM GO:0005739|"GO:mitochondrion"|PF01597|IPR002930| GO:PFM GO:0005960|"GO:glycine cleavage complex"|PF01597|IPR002930| GO:PFM GO:0006546|"GO:glycine catabolic process"|PF01597|IPR002930| RP:SCP:NREP 1 RP:SCP:REP 2->131|1dxmA|3e-13|34.4|125/131|b.84.1.1| HM:SCP:REP 3->134|1onlA_|9.9e-36|48.0|127/0|b.84.1.1|1/1|Single hybrid motif| OP:NHOMO 1064 OP:NHOMOORG 877 OP:PATTERN 111-112322222232--------1111--11----------------------11111111111--- 122311-----11111111-1111211111121111112311111111-11-32211211111221311111111111----1331111111-111---113111111111------111111111111111112111111---1311111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111--2-11---------111-----------------------------------------------------21--1111111-1--111----1---11----31-4-11113112-1--112111111111111111111111111111111111-1111111-211-1111111-1111111111111111112111111111111-111-----------------------------11111-1111111111111111111111111111111111111111111111111--111111111111111111111-1-1111412111-2222222122212111--------------------------3311-111211111111111111111111111--11113------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111---111111111111211---------------1111111111112322222222322222222222222211112111111111111111111111111111-111111--------1-1-------------------------1111111111111 -1--341-211-111111111111111111111111111111111111112222--1--1--11111111111111111111111111-11111111111111112-12-3213221112-1111213-172-1121-111--91-11--1113-31121-111112112-22111111I111112474131112111- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 131 STR:RPRED 99.2 SQ:SECSTR ccccccccEEcTTcEEEEEETTEEEEEEEcHHHHHHHccEEEEEcccTTcEEcTTcEEEEEEEcccEEEEEccccEEEEEEcccTTTcTTHHHHccccccccEEEEcccTTGGGcccTTcEEHHHHHHHHH# DISOP:02AL 132-133| PSIPRED cccccccccccccEEEEEEccccEEEEEEcHHHHHHcccEEEEEEcccccEEEccccEEEEEEEcEEcccccccccEEEEEEHHHHHcHHHHccccccccEEEEEEEccHHHHHHHHHccccHHHHHHHHcc //