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Nocardia farcinica IFM 10152 (nfar0)
Gene : gcvP
DDBJ      :gcvP         putative glycine dehydrogenase
Swiss-Prot:GCSP_NOCFA   RecName: Full=Glycine dehydrogenase [decarboxylating];         EC=1.4.4.2;AltName: Full=Glycine decarboxylase;AltName: Full=Glycine cleavage system P-protein;

Homologs  Archaea  31/68 : Bacteria  627/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:934 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   78->356 1wytA PDBj 2e-40 36.7 %
:BLT:PDB   464->851 1wyuB PDBj 4e-66 44.5 %
:RPS:PDB   73->532 3c67A PDBj 9e-61 12.6 %
:RPS:PDB   513->583 2bqoA PDBj 1e-21 12.7 %
:RPS:PDB   575->858 2ctzA PDBj 9e-24 13.2 %
:RPS:SCOP  8->407 1wytA1  c.67.1.7 * 8e-93 30.9 %
:RPS:SCOP  426->886 1wytB1  c.67.1.7 * 2e-55 41.5 %
:HMM:SCOP  7->433 1wyuA1 c.67.1.7 * 2e-96 40.0 %
:HMM:SCOP  463->928 1wyuB1 c.67.1.7 * 5.9e-101 35.4 %
:RPS:PFM   78->370 PF02347 * GDC-P 1e-67 49.8 %
:RPS:PFM   436->776 PF02347 * GDC-P 8e-67 44.2 %
:HMM:PFM   7->433 PF02347 * GDC-P 2.3e-173 54.1 423/429  
:HMM:PFM   459->715 PF02347 * GDC-P 4.7e-16 27.7 235/429  
:BLT:SWISS 1->934 GCSP_NOCFA 0.0 100.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57337.1 GT:GENE gcvP GT:PRODUCT putative glycine dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2650353..2653157 GB:FROM 2650353 GB:TO 2653157 GB:DIRECTION + GB:GENE gcvP GB:PRODUCT putative glycine dehydrogenase GB:PROTEIN_ID BAD57337.1 LENGTH 934 SQ:AASEQ MTRSFADRHIGPDAAELSRILEVVGVDSLDALAAAALPASILDDAGAGPLAALPPAVSEHEALAELAALAQSNTVTTSMIGLGYYDTLTPPVLVRNLLENPAWYTAYTPYQPEISQGRLEALLNFQTMVSDLTGMEVANASMLDEATAAAEAMTLLRRAGRSRSNRLLIDADLFPQTRTVLHTRAEPLGIEIVEADLAAAGLPEGGFFGVIVQVPGASGRVVDWTALIAAAHERGALVAAGADLLAMTLIVPPGEQGADVCFGTTQRFGVPMGFGGPHAGYLAVRSAHARQLPGRLVGVSKDADGNPAYRLALQTREQHIRREKATSNICTAQVLLAIVAAMYACYHGADGLRAIARRVHGHAARIAGALGEALVHDTYFDTVLARVPGHAEAVVAKAAACGITLRLVDPDHVAVACDEATTDAHVEAVLDAFGVAPAEPVDAGIATRTSEFLTHPAFTRYRTETAMLRYLRSLSDKDIALDRSMIPLGSCTMKLNATAEMEPITWPGFAKLHPYAPVEHAPGLLKLIGDLESWLAEITGYDAVSLQPNAGSQGEYAGLLAIRRYHLDRGDTHRDTCLIPSSAHGTNAASAAMAGLRVEVVKCRENGDVDLDDLRAKITDHAERLACIMITYPSTHGVYEHEIAELCALVHDAGGQVYVDGANLNALVGLARPGRFGGDVSHLNLHKTFCIPHGGGGPGVGPVAVRAHLAQYLPGDPLESGSHAVSAARYGSASILPITWAYIRMMGAEGLRKATLTAIASANYLARRLDEYFPVLYTGENGMVAHECILDLRELTKRTGVTVDDVAKRLADYGFHAPTMSFPVAGTLMVEPTESENLAELDEFVAAMIAIRAEIDQVGAGVWPAEDNPLRGAPHTAECLVGEWTHPYSREIAVYPRGLGHARAKVWPAVRRIDGAYGDRNLVCSCPPLEAYAE GT:EXON 1|1-934:0| SW:ID GCSP_NOCFA SW:DE RecName: Full=Glycine dehydrogenase [decarboxylating]; EC=1.4.4.2;AltName: Full=Glycine decarboxylase;AltName: Full=Glycine cleavage system P-protein; SW:GN Name=gcvP; OrderedLocusNames=NFA_24900; SW:KW Complete proteome; Oxidoreductase; Pyridoxal phosphate. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->934|GCSP_NOCFA|0.0|100.0|934/934| GO:SWS:NREP 2 GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| TM:NTM 2 TM:REGION 16->38| TM:REGION 325->347| SEG 27->56|dsldalaaaalpasilddagagplaalppa| SEG 59->70|ehealaelaala| SEG 145->159|eataaaeamtllrra| SEG 235->246|galvaagadlla| SEG 391->400|aeavvakaaa| SEG 694->703|ggggpgvgpv| BL:PDB:NREP 2 BL:PDB:REP 78->356|1wytA|2e-40|36.7|275/437| BL:PDB:REP 464->851|1wyuB|4e-66|44.5|375/473| RP:PDB:NREP 3 RP:PDB:REP 73->532|3c67A|9e-61|12.6|446/758| RP:PDB:REP 513->583|2bqoA|1e-21|12.7|71/130| RP:PDB:REP 575->858|2ctzA|9e-24|13.2|280/421| RP:PFM:NREP 2 RP:PFM:REP 78->370|PF02347|1e-67|49.8|293/366|GDC-P| RP:PFM:REP 436->776|PF02347|8e-67|44.2|328/366|GDC-P| HM:PFM:NREP 2 HM:PFM:REP 7->433|PF02347|2.3e-173|54.1|423/429|GDC-P| HM:PFM:REP 459->715|PF02347|4.7e-16|27.7|235/429|GDC-P| RP:SCP:NREP 2 RP:SCP:REP 8->407|1wytA1|8e-93|30.9|391/437|c.67.1.7| RP:SCP:REP 426->886|1wytB1|2e-55|41.5|426/471|c.67.1.7| HM:SCP:REP 7->433|1wyuA1|2e-96|40.0|415/0|c.67.1.7|1/2|PLP-dependent transferases| HM:SCP:REP 463->928|1wyuB1|5.9e-101|35.4|407/0|c.67.1.7|2/2|PLP-dependent transferases| OP:NHOMO 1179 OP:NHOMOORG 843 OP:PATTERN 222-2-2222222222--------2222--22----------------------22222222224--- 222221-----11111111-1111211111111111113211111111-11-2211111111111111111-----------22----1111-111---1-111111111--------------22222212222222222---2211111111111111111111111111111111111111112222222222222222222222222222222222222222222224-22222222222222232222-----------------------------------------------------------------------42--2222222-2--222----2---22----22-2-22222222-2--1-2222211111221111111111111111111111-1111111-212-111111111111222221111111111111111111111-222-----------------------------12222-111111111111111111111111111111111--11111111111112--12---1111-11112221111-2-2222222222-2222222-2222212---------------------------2211-1-1211111111111111111111111--12222------11111111111111111-11111111111111111111111111111111-1111111111111111111-111111111111---122222222222111----------------------1112122222221123221111222222222-1111-111111111111111111111111-2-111111--------2-2-------------------------2222222222111 ----111-311-11111111111111111111111111112111112111111121111111111-11-11111121-1111111111-12111111111111111-1-12121111111111123121151-11111-1111111111111111211212711122112212411111J1113142451211121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 824 STR:RPRED 88.2 SQ:SECSTR ########################################################################HHTEEcccTTccccEEcccTTcTTTcTTcccHHHHTTTcHHHHHHHHHHHHTTcccTTccccGGGTTcccccccccccGGGTcccccccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccTTcccccccEEEccTTTccTTcccEEEEHHHHHEETTEEEEEEcHHHHHHHHHHccccEEEcHHHHHHHHHHTcTTcGGGTcccHHHHHHHHHTTccGGGGcccEEEEEcTTccEEEEEEcEEHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHTEETTEccEEccccccTTcccccccGGGcccGGGGHHHHHTTcccHHHHHHHHHHHTcTTTTcHTTcccccccccTTcTTTTcEEccHHHHHHHHHHHHHTTcHHHHHHHHHHHHcTTTTcccccccEEcTTTccEEcccccHHHEGHHHHHHHHHHTcHHHHHHTTcEEEEEETTHHHHHHHHHHHHHHHHHHHTHHHHHHHTHHHHHHHTcGGGHHHHHHccccEEEEcTTcHHHHHHHHHHcHHcTTccEEEEEEcccTTTcccccHHHHHHHHHHHTcEEEEEcTTTTTTccccHHHHHTcGGGccEEEEEcccTccccEEEEEcHHHHHHHHHHcHHHHTcccccHHHHHccccHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHHHHHHTccccccccccEEEEcccHccTTTccHHHHHHHHHHHHHHHcEEccEEcTTTccEEEEcccTTccHHHHHHHHHHHHHHEEccccccHHHHHHHHHHTTccccEEccEEEEEccTTccHHHHHH###################################### DISOP:02AL 932-934| PSIPRED cccccHHHcccccHHHHHHHHHHcccccHHHHHHHHccHHHccHHHccccccccccccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHcccHHHccccccHHHHHHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHHHHHHHHccEEEEEEcccccccccccEEEEEEEccccccEEEcHHHHHHHHHHcccEEEEEEcHHHHHHHcccHHccccEEEEccccccccccccccccccccccHHHHHHccccEEEEEEEcccccEEEEEcccccccccccccccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEccccHHHHHHHHHHccccccEEEccEEEEEEcccccHHHHHHHHHHHccccccccccHHHcccHHHHccccccccccHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHccHHHHcccccccHHccHHHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHHHHHHHccccccccEEEEccccccccHHHHHHcccEEEEEEccccccccHHHHHHHHHHccccEEEEEEEccccccEEcccHHHHHHHHHHcccEEEEEEEccccEEEEcccHHHccEEEEEccccccccccccccccEEEEEEEHHHHHHccccEEccccccEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccEEEEEcccHHHHHHcccHHHHHHHHHHcccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHccccccccHHHcccccccccccccccccHHHHHcccccccEEEccccHHHHcc //