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Nocardia farcinica IFM 10152 (nfar0)
Gene : gcvT
DDBJ      :gcvT         putative glycine cleavage system protein T
Swiss-Prot:GCST_NOCFA   RecName: Full=Aminomethyltransferase;         EC=2.1.2.10;AltName: Full=Glycine cleavage system T protein;

Homologs  Archaea  33/68 : Bacteria  634/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
b.44.2d.250.1
:366 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->360 1yx2B PDBj 8e-62 40.2 %
:RPS:SCOP  5->280 1pj5A4  d.250.1.1 * 2e-56 26.9 %
:RPS:SCOP  283->362 1v5vA1  b.44.2.1 * 3e-20 44.3 %
:HMM:SCOP  4->281 1pj5A4 d.250.1.1 * 1.5e-86 45.5 %
:HMM:SCOP  272->367 1vloA1 b.44.2.1 * 4.5e-28 51.1 %
:RPS:PFM   50->257 PF01571 * GCV_T 9e-40 42.6 %
:RPS:PFM   267->356 PF08669 * GCV_T_C 1e-11 49.4 %
:HMM:PFM   50->259 PF01571 * GCV_T 3.9e-67 42.3 208/211  
:HMM:PFM   266->358 PF08669 * GCV_T_C 1.4e-26 51.1 92/95  
:BLT:SWISS 1->366 GCST_NOCFA 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56542.1 GT:GENE gcvT GT:PRODUCT putative glycine cleavage system protein T GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1847821..1848921 GB:FROM 1847821 GB:TO 1848921 GB:DIRECTION + GB:GENE gcvT GB:PRODUCT putative glycine cleavage system protein T GB:PROTEIN_ID BAD56542.1 LENGTH 366 SQ:AASEQ MTETDLLRGPVHDLHGELGATFAEFGGWQMPVAYAGTVGEHQAVRTTVGLFDVSHLGKATVAGPGAAQFVNATLTNDLGRIHPGKAQYTLCCSADGGVIDDLIAYYVADDEIFLVPNAANTAAVVAELAAAAPAGVTVTDQHRDYAVFAVQGPRSAQVLAALGLPTEMEYMAFADAAWDGRPIRVCRTGYTGEHGYEVLPRWADAEPVFRALLEQVRAADGQPAGLGARDTLRTEMGYPLHGHELSREISPVQARTGWAVGWRKPQFWGKAALEQEKAAGPRRILMGLKAIDRGVLRQGQPVLRDGEPVGETTSGTFSPTLKVGIALALLDTGAGLEPGAEVAVDVRGRRLRCEVVKPPFVPSRTS GT:EXON 1|1-366:0| SW:ID GCST_NOCFA SW:DE RecName: Full=Aminomethyltransferase; EC=2.1.2.10;AltName: Full=Glycine cleavage system T protein; SW:GN Name=gcvT; OrderedLocusNames=NFA_16960; SW:KW Aminotransferase; Complete proteome; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->366|GCST_NOCFA|0.0|100.0|366/366| GO:SWS:NREP 2 GO:SWS GO:0008483|"GO:transaminase activity"|Aminotransferase| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 114->138|lvpnaantaavvaelaaaapagvtv| BL:PDB:NREP 1 BL:PDB:REP 6->360|1yx2B|8e-62|40.2|348/355| RP:PFM:NREP 2 RP:PFM:REP 50->257|PF01571|9e-40|42.6|202/211|GCV_T| RP:PFM:REP 267->356|PF08669|1e-11|49.4|89/94|GCV_T_C| HM:PFM:NREP 2 HM:PFM:REP 50->259|PF01571|3.9e-67|42.3|208/211|GCV_T| HM:PFM:REP 266->358|PF08669|1.4e-26|51.1|92/95|GCV_T_C| GO:PFM:NREP 3 GO:PFM GO:0004047|"GO:aminomethyltransferase activity"|PF01571|IPR006222| GO:PFM GO:0005737|"GO:cytoplasm"|PF01571|IPR006222| GO:PFM GO:0006546|"GO:glycine catabolic process"|PF01571|IPR006222| RP:SCP:NREP 2 RP:SCP:REP 5->280|1pj5A4|2e-56|26.9|275/315|d.250.1.1| RP:SCP:REP 283->362|1v5vA1|3e-20|44.3|79/89|b.44.2.1| HM:SCP:REP 4->281|1pj5A4|1.5e-86|45.5|277/315|d.250.1.1|1/1|Folate-binding domain| HM:SCP:REP 272->367|1vloA1|4.5e-28|51.1|92/100|b.44.2.1|1/1|Aminomethyltransferase beta-barrel domain| OP:NHOMO 1319 OP:NHOMOORG 848 OP:PATTERN 111-111111111111--------42224-12----------------------11111111111--- 132111-----11111111-1311311111113222114411111121-11-4532111111411471111-----------61----1111-111---1-211111111--------------11111111111122211---11111211111111111111111111111111111111111-1111111111111111111111111111111111111111111111-11111111111111111111-----------------------------------------------------------------------11--1111111-1--111----1---11----11-1-11111111-1--1-1211111111131111111112111221222212-322223213C2-84435375579A451112632222A6C1111111121113111-----------------------------71121-112212222222211122362222122332311--11331111111112--112-21111111111111111-1-1111111111-1111111-1111121---------------------------1111-1-1411111111111111111111111--11112------11111111221111111-21-1111111211111111111111111111111111111111111111111-111111111111---111111111111122---------------------1111313333333663433144411111111111111-11111111111111111111111111-111111--------1-1-------------------------1111111111111 ----11--421-11121221211222211111111111111-11111111122211111111111-11-111111-111111-11111-1311112111111111--2116222124121233344122DX3-447-2123123-1212121132112336113111213223321111K1111121232211221112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 364 STR:RPRED 99.5 SQ:SECSTR cccccccccTTGGGHHHHTcEEEEETTEEEEEEcccHHHHHHHHHHccEEEEcTTcEEEEEEcTTHHHHHHHHHcccGGGccTTEEEEEEEEcTTccEEEEEEEEEEETTEEEEEEEcGGGHHHHHHHHHHcccccEEEEcTTTEEEEEEEcTTHHHHHHHHcccTTccTTcEEEEEETTEEEEEEccccccccEEEEEEEGGGHHHHHHHHHHHHGGGTcEEEcHHHHHHHHHHTTccccTTTccTTccTTTTTcGGGccTTccccTTHHHHHHHHHHcccEEEEEEEEcccccccTTcEEEETTEEEEEEEEEEEETTTTEEEEEEEEEGGGcTcTTcEEEEEETTEEEEEEEEcccccccc## DISOP:02AL 1-3, 363-366| PSIPRED ccccccccccHHHHHHHcccEEEEcccEEcccccccHHHHHHHHHHccEEEEEcccEEEEEEcHHHHHHHHccccccccccccccEEEEEEEcccccEEEEEEEEEEcccEEEEEEcccHHHHHHHHHHHHcccccEEEEccccEEEEEEEcHHHHHHHHHccccHHccccccccEEEccccEEEEEccccccccEEEEEccccHHHHHHHHHHHHHHcccEEEcHHHHHHHHHHHccccccccccccccHHHHcHHHHccccccccHHHHHHHHHHHccccEEEEEEEEccccccccccEEEEccEEEEEEEEcccccccccEEEEEEEEHHHccccccEEEEEEccEEEEEEEEEccccccccc //