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Nocardia farcinica IFM 10152 (nfar0)
Gene : glcB
DDBJ      :glcB         putative malate synthase
Swiss-Prot:MASZ_NOCFA   RecName: Full=Malate synthase G;         EC=2.3.3.9;

Homologs  Archaea  1/68 : Bacteria  232/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
c.1.13
:726 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->714 2gq3A PDBj 0.0 68.7 %
:RPS:PDB   3->722 1d8cA PDBj 3e-92 45.9 %
:RPS:SCOP  3->722 1d8cA  c.1.13.1 * e-158 53.0 %
:HMM:SCOP  2->726 1n8iA_ c.1.13.1 * 0 53.5 %
:RPS:PFM   19->115 PF01274 * Malate_synthase 7e-18 42.4 %
:RPS:PFM   238->696 PF01274 * Malate_synthase e-117 56.0 %
:HMM:PFM   18->698 PF01274 * Malate_synthase 2.2e-192 45.0 496/523  
:BLT:SWISS 1->726 MASZ_NOCFA 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57350.1 GT:GENE glcB GT:PRODUCT putative malate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2664979..2667159 GB:FROM 2664979 GB:TO 2667159 GB:DIRECTION + GB:GENE glcB GB:PRODUCT putative malate synthase GB:PROTEIN_ID BAD57350.1 LENGTH 726 SQ:AASEQ MTERIQVGGLQVAKVLHDFIENEALPGSGVDSAAFWAGAEQVITDLAPRNRALLAERDEIQGKLDAWHAEHPGANYDKAAYKSFLTEIGYLRPEPADFQITTQNVDSEIAETAGPQLVVPVMNARFAINAANARWGSLYDALYGTDAIPEDNGAEKGTGYNKVRGDKVIEWARNFLDDAVTLITGSHIGSTSYAIVDGELEVGLEDGTTIGLADASQLVGYQGDPAKPTSILLKHNGLHIDIQIDPESPIGSTDTAGIKDIVLESAVTTIMDFEDSVAAVDAEDKVLCYHNWLGLMQGTLAEEVSKGGKTFTRTMNPDRVYTALDGSELRLHGRSLLFVRNVGHLMTSDAILDAQGNEVPEGIMDGLITSLIAKHSLREDVELKNSRTGSVYIVKPKMHGPDEVAFTNELFGRIEDVLGLARNTLKVGIMDEERRTTVNLKACIEAAKERVVFINTGFLDRTGDEIHTSMEAGPMVRKADMKSQQWIASYEDWNVDTGLATGLPGKAQIGKGMWAMPDLMADMLAQKIGHPKSGANTAWVPSPTAATLHATHYHLVDVFKRQAEIAKGGRRASVDEILEIPLAANPNWSPEEIRQELDNNSQSILGYVVRWIDQGVGCSKVPDIKDVALMEDRATLRISSQLMANWLRHGIVTADEVVASLERMAPVVDRQNAGDPNYRPMAPDFDGSIAFQAAKELILEGTKQPNGYTEPILHRRRREAKALSRV GT:EXON 1|1-726:0| SW:ID MASZ_NOCFA SW:DE RecName: Full=Malate synthase G; EC=2.3.3.9; SW:GN Name=glcB; OrderedLocusNames=NFA_25030; SW:KW Complete proteome; Cytoplasm; Glyoxylate bypass; Transferase;Tricarboxylic acid cycle. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->726|MASZ_NOCFA|0.0|100.0|726/726| GO:SWS:NREP 4 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006097|"GO:glyoxylate cycle"|Glyoxylate bypass| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| GO:SWS GO:0006099|"GO:tricarboxylic acid cycle"|Tricarboxylic acid cycle| SEG 123->134|narfainaanar| BL:PDB:NREP 1 BL:PDB:REP 2->714|2gq3A|0.0|68.7|705/720| RP:PDB:NREP 1 RP:PDB:REP 3->722|1d8cA|3e-92|45.9|687/688| RP:PFM:NREP 2 RP:PFM:REP 19->115|PF01274|7e-18|42.4|84/500|Malate_synthase| RP:PFM:REP 238->696|PF01274|e-117|56.0|423/500|Malate_synthase| HM:PFM:NREP 1 HM:PFM:REP 18->698|PF01274|2.2e-192|45.0|496/523|Malate_synthase| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF01274|IPR011076| GO:PFM GO:0003824|"GO:catalytic activity"|PF01274|IPR011076| RP:SCP:NREP 1 RP:SCP:REP 3->722|1d8cA|e-158|53.0|704/709|c.1.13.1| HM:SCP:REP 2->726|1n8iA_|0|53.5|723/0|c.1.13.1|1/1|Malate synthase G| OP:NHOMO 258 OP:NHOMOORG 239 OP:PATTERN -------------------1------------------------------------------------ -------111111211111-11111111111111111122-1-1----------------------------------------------------------------------------------------------------------------------------------------------------1----------------11-------111---1----------------------------------------------------------------------------------------------------------------------------------------------------------------211111111111111111111111---1--1-111--111111111111-1---1111111111--------111-1--------------------------------11111-111111111111----1121-----1121----11---1-111111111-------------------1-------111-1-111------------------------------------------------11-2-1111111112211111122122----11--------------1--1111111--111111111-1111111-----------------------------111-----------------------------1111---------------11111111112-11111111211122211-------------1-------2--11----------------------------------------------------------------------- -------------1--11--------------------------------------------------------------------------1-----------------------------------------------------------------------------------------------1-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 723 STR:RPRED 99.6 SQ:SECSTR cccEEEETTEEEEHHHHHHHHHHTHHHHTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHTcccccccccccccccccHHHHTccccEEEEETTcHHHHHHHHGGGEEEHHHHHHTccccccccccccTTcccHHHHHHHHHHHHHHHHHHcccccccGGGEEEEEEETTEEEEEETTccEEccccGGGEEEEEccTTcccEEEEEETTEEEEEEEcTTcTTGGGcTTcEEEEEEEcccEEEEEccTTcccccHHHHHHHHHHHHHHHTTEEEEEEEETTTcccccccccEEEEETTccEEEEccccEEEEEcccccEEEEEEcTTccEEEHHHHHHHHHHHHHHEEEcccccEEHHHHccccccccEEEEEccccHHHHHHHHHHHHHHHHHTcTTcEEEEEccHHHHHTHHHHHHTTTTTEEEEEEcHHHHHHHHHHTGGTTcTccccGGGGGcHHHHHHHHHHHHHHHHTTcTTTcEEEEEccTTcHHHHHTHHHHHTTccEEEEccHHHHHHHHHHHHHccHHHHHHHHHHccGGGGHHHHHHHHTcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEcTTccHEEccHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHTTTcTTccccTccTTTcHHHHHHHHHHHTGGGcGGGccHHHHHHHHHHHTTT### DISOP:02AL 1-2, 153-159, 724-726| PSIPRED ccccEEcccEEEHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccccccccEEEEEccccHHHHHccccEEEEEccccHHHHHHccccHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHEEEEEEccEEEEEEccccccccccHHHccccccccccccHHHcccccccEEEEEccccccccccHHHHHHHHHccHHHHHHHcHHHccccccccccccHHcHHHHHccccHHHHHccccEEEEEcccccEEEcccccEEEEccccEEEEEccccccccccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEcccccHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccHHHHHHHHHHHHHHcccEEEcccHHHHHHHHHHHHHHcccccHHHHcccHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHccccccHHHHccccccccHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHcc //