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Nocardia farcinica IFM 10152 (nfar0)
Gene : glf
DDBJ      :glf          putative UDP-galactopyranose mutase
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  198/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
c.3.1c.4.1
:409 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->405 1v0jA PDBj 0.0 79.7 %
:RPS:PDB   19->220 2e1mA PDBj 1e-21 11.9 %
:RPS:SCOP  17->314 1i8tA1  c.4.1.3 * 4e-27 39.6 %
:HMM:SCOP  11->400 1ltxR1 c.3.1.3 * 1.8e-34 23.9 %
:RPS:PFM   166->376 PF03275 * GLF 5e-58 60.7 %
:HMM:PFM   165->376 PF03275 * GLF 3.7e-80 51.0 204/204  
:HMM:PFM   14->57 PF00996 * GDI 3.3e-06 34.9 43/439  
:HMM:PFM   40->88 PF01593 * Amino_oxidase 0.00011 25.0 48/449  
:BLT:SWISS 18->394 GLF8_KLEPN 1e-87 45.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55018.1 GT:GENE glf GT:PRODUCT putative UDP-galactopyranose mutase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 168440..169669 GB:FROM 168440 GB:TO 169669 GB:DIRECTION + GB:GENE glf GB:PRODUCT putative UDP-galactopyranose mutase GB:PROTEIN_ID BAD55018.1 LENGTH 409 SQ:AASEQ MTVASSSGNSANVNAQFDLIVVGSGFFGLTIAERTANVLGKRVLVLDRRHHIGGNAYSEPEPETGIEIHKYGAHLFHTSNKRVWDYVNQFTEFTGYQHRVFAMHKGQAYQFPMGLGLISQFFGRYFTPDEARKLIAEQAAEIDTKDAQNLEEKAISLIGRPLYEAFIRDYTAKQWQTDPKELPAGNITRLPVRYTFDNRYFNDTYEGLPKEGYTKWLENMAASELIEVRLNTDWFEVRAEIRAANPDAPVVYTGPLDRYFDYSEGELGWRTIDFETEVVQTGDYQGTSVMNYNDADVPFTRIIEPRHFHPEREYYPNDKTVIMREYSRFAQTGDEPYYPINTPEDRAKLLAYRERAKRETAEAKVLFGGRLGTYQYLDMHMAIGSALSMFDNVLRPHLEAGAALVDEQD GT:EXON 1|1-409:0| BL:SWS:NREP 1 BL:SWS:REP 18->394|GLF8_KLEPN|1e-87|45.5|363/384| SEG 3->15|vasssgnsanvna| BL:PDB:NREP 1 BL:PDB:REP 16->405|1v0jA|0.0|79.7|385/388| RP:PDB:NREP 1 RP:PDB:REP 19->220|2e1mA|1e-21|11.9|201/356| RP:PFM:NREP 1 RP:PFM:REP 166->376|PF03275|5e-58|60.7|201/203|GLF| HM:PFM:NREP 3 HM:PFM:REP 165->376|PF03275|3.7e-80|51.0|204/204|GLF| HM:PFM:REP 14->57|PF00996|3.3e-06|34.9|43/439|GDI| HM:PFM:REP 40->88|PF01593|0.00011|25.0|48/449|Amino_oxidase| GO:PFM:NREP 1 GO:PFM GO:0008767|"GO:UDP-galactopyranose mutase activity"|PF03275|IPR015899| RP:SCP:NREP 1 RP:SCP:REP 17->314|1i8tA1|4e-27|39.6|283/298|c.4.1.3| HM:SCP:REP 11->400|1ltxR1|1.8e-34|23.9|330/501|c.3.1.3|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 256 OP:NHOMOORG 212 OP:PATTERN --------------------------------121--------------------------------- 1----11111111111111-11111111111111111111----111-111-1111-1---11-111----11111111111-----1-1-1-------1-----1-1-----------------------------------------1-------------------1-------------11111-----------------------------1-1---------------------------------12-2--11111-2111--11111-11-----------11----------------------21---111----1-1111111-1---11----1-----111-1-------------2-------11--------------------------------2---------1111--1-1-1--------1-1-----11111111---1-----------------------------------------------1---------1----------------------------------1---------------------------1----1-1-----------1-------1--11--1----------------------1-1--------------1-1----1----------1-1---11---1--------1-1----------1-----1-----1--1-1-11--1111------------------------------------------11111-----------------------------1----1111--------------------------11111-----------11---------------------------1---13-1-----1----------1- ------------------------------------------------------------------------------------------------------------6--------------------------------------------------221----------------2O222----------1----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 392 STR:RPRED 95.8 SQ:SECSTR ###############cEEEEEEcccHHHHHHHHHHHHTTccEEEEEcccccccTTccEEcccTTcccccEcccccEETTcHHHHHHHHHTTccEEEEccccccTTcccccccccccEEEcccTTcEEEcccccTTccccccccccEEEETTEEEEHHHHHHcTHHHHHHTTccGGGGGccHHHHHHHHHHHHHHHHEEEETTTEEEEccHHHHHHHHHHHHHTccGGcccccTTccEEEEEEETTTEEEEEETTccEEEEEEEEEcccHHHHTTcEEEEEcccHHHHGGGGcccTTcTTccEEEccccHHHHHEEccTTccccEEEEcccTTccccEEEEEEETHHHHHHHTcHHHHHHHHHHHHHHTcEccHHHHHTTHHHHHHHTTTGGGEHHHTTccccccccc## DISOP:02AL 1-11, 403-409| PSIPRED ccccccccccccccccccEEEEcccHHHHHHHHHHHHHcccEEEEEEcccccccEEEEEEEccccEEEEEcccEEEccccHHHHHHHHHHHHHcccccEEEEEEccEEEEcccccccHHHHccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHccccHHHHcccHHHccHHHHHHccccccccccccccHHHHHHcHHHHHHHHHHHHccccEEEEcccHHHHHHHHHEEcccccEEEcccHHHHHcccccccccEEEEEEEEEEcccccccccEEEEccccccEEEEEEcccccccccccccccEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEcccccEEEcHHHHHHHHHHHHHHHHHHHHHcccccHHccc //