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Nocardia farcinica IFM 10152 (nfar0)
Gene : glfT
DDBJ      :glfT         putative galactofuranosyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  72/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.68.1
:644 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   160->294 3e26A PDBj 9e-05 29.0 %
:RPS:PDB   135->472 2d7iA PDBj 2e-16 9.8 %
:RPS:SCOP  173->436 1xhbA2  c.68.1.17 * 4e-16 10.2 %
:HMM:SCOP  168->430 1fo8A_ c.68.1.10 * 6.7e-30 28.8 %
:HMM:PFM   244->299 PF00535 * Glycos_transf_2 1.8e-08 23.6 55/169  
:BLT:SWISS 81->222 DYH5_MOUSE 8e-04 32.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55019.1 GT:GENE glfT GT:PRODUCT putative galactofuranosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 169707..171641 GB:FROM 169707 GB:TO 171641 GB:DIRECTION + GB:GENE glfT GB:PRODUCT putative galactofuranosyltransferase GB:PROTEIN_ID BAD55019.1 LENGTH 644 SQ:AASEQ MTQSIVEDMTTQTRATSLLQRIILPRPGEPLDVRTLYLEESATNARRAHAATRTSLSIGAESEVSFCTYFNALPASYWRRWTVLTSVVLRLELAGHGRVDVYRSKADGSRIHVQGKEFSVPAGGESTTVEFETELAPFEDGGWIWFDITTDTAVTLLAGGWYAPLEAPGEGSIAVGMPTFNRPTDAVKTLAALGADPLVLEKVAAVIIPDQGTRKVVDEPGFAEAAAVLGDRLAIHDQPNLGGSGGYSRVMYEALKTTDAEYIVFMDDDIEIEPDSILRALAFARFAKSPVLVGGQMLNLQERSHLHVMGEVVDRSIFMWTAAPNVEYDHDFAKYPLRDRDNSKLLHRRIDVDFNGWWTCVIPRQVAEQIGQPLPLFLKWDDVEYGLRAREAGYPTVTLPGAAVWHMAWSDKDDAIDWQAYFHLRNRLVVAALHLPGEGRGMIVNTVKATLKHLLCLEYSTVAIQNLAIRDFLAGPDRLFQLLPSALGAVHALRKQYPDAVILPSSTELPLASHLDVGAVGEPANPVSKIGRLAKGIVHNLRPARPEHHETPQLNVPTLDARWFLLSQVDGVTVTTADGRGVVYRKRDPRQAWGLFKEAMRLRKELAARFPELRERYRAAHPRLTGAAAWENAFGIEQTGSERP GT:EXON 1|1-644:0| BL:SWS:NREP 1 BL:SWS:REP 81->222|DYH5_MOUSE|8e-04|32.2|118/100| SEG 42->54|atnarrahaatrt| BL:PDB:NREP 1 BL:PDB:REP 160->294|3e26A|9e-05|29.0|124/274| RP:PDB:NREP 1 RP:PDB:REP 135->472|2d7iA|2e-16|9.8|325/536| HM:PFM:NREP 1 HM:PFM:REP 244->299|PF00535|1.8e-08|23.6|55/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 173->436|1xhbA2|4e-16|10.2|255/316|c.68.1.17| HM:SCP:REP 168->430|1fo8A_|6.7e-30|28.8|215/0|c.68.1.10|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 86 OP:NHOMOORG 72 OP:PATTERN -------------------------------------------------------------------- -----11111111111111-11111111111111112222----112--11-1111-1----1--13-----222--3-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------1--------------------------1-----------------------------------------------------------------------------------------------11111111---2-------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------1--1-1-11---1-1---------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 415 STR:RPRED 64.4 SQ:SECSTR ######################################################################################################################################HHTTcccHHHHHTccTTccccccccGGGGTccEEccccEEEEEEEccccHHHHHHHHHHHHHHccGGGEEEEEEEEcccccGGGTHHHHHHHTTcTTEEEEEccccccHHccHHHHHHHHHHHccccEEEEccccEEEcTTccHHHHHHHHHcTTEEEEEEEEEEcTTTccEEccTTcccEEEEcTTccEEEEcccTTTccccTTcccHTTccccEEccccccccEEEEHHHHHHTTcccTTccccHHHHHHHHHHHTTcEEEEEEEEEEEEccccccccccHcccccHHHHHHHHHHHHcGGGHHHHHTTcGGGTTccccccHHHHHHHHHHTcccHHHHGGGccHHHHHHHHTTTccccTTccHHHHHH######HHHHHHHHccTTcHHHHHHHHHHHHHHHHHHTGGGcHHHHHHHH######################################################################################### DISOP:02AL 1-3, 6-7, 637-644| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHEEEccccccEEEEcccEEEEEccccEEEEEccHHHHHHHHHHHHcEEEEEEEEEEEEEEEEEEEEEEccccccHHHccEEEEccccccccEEEEEEEcEEccccEEEEEEEEEcEEEEEEcccEEccccccccccEEEEEEccccHHHHHHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHcccccEEEEEEEEEcccccEEEEcccccccccccccccccccccccccccccccccccHHcccccEEEEccHHHEEEEHHHHHHccccccccEEEEcHHHHHHHHHccccEEEEccEEEEEcccccccccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHcccccccccHHHHHHHHHHHHHHHHHccccccccccEEEEEccHHHHHcccEEEEccEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccc //