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Nocardia farcinica IFM 10152 (nfar0)
Gene : glmS
DDBJ      :glmS         putative L-glutamine-D-fructose-6-phosphate amidotransferase
Swiss-Prot:             

Homologs  Archaea  64/68 : Bacteria  841/915 : Eukaryota  194/199 : Viruses  2/175   --->[See Alignment]
c.80.1d.153.1
:626 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->626 2j6hA PDBj e-110 39.9 %
:RPS:PDB   2->626 2bplA PDBj e-115 40.7 %
:RPS:SCOP  2->235 1ao0A2  d.153.1.1 * 2e-46 22.2 %
:RPS:SCOP  253->626 1jxaA1  c.80.1.1 * e-111 41.5 %
:HMM:SCOP  2->232 1ecfA2 d.153.1.1 * 5.8e-73 39.9 %
:HMM:SCOP  254->626 1moqA_ c.80.1.1 * 1.8e-116 46.3 %
:RPS:PFM   105->246 PF09147 * DUF1933 6e-08 31.5 %
:RPS:PFM   302->424 PF01380 * SIS 4e-17 39.0 %
:RPS:PFM   474->586 PF01380 * SIS 5e-14 36.3 %
:HMM:PFM   304->427 PF01380 * SIS 3.6e-37 37.1 124/131  
:HMM:PFM   475->605 PF01380 * SIS 3.3e-22 27.8 126/131  
:HMM:PFM   2->43 PF00310 * GATase_2 8.9e-06 34.1 41/362  
:HMM:PFM   67->197 PF00310 * GATase_2 1.8e-17 24.6 122/362  
:BLT:SWISS 1->626 GLMS_MYCPA 0.0 77.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55721.1 GT:GENE glmS GT:PRODUCT putative L-glutamine-D-fructose-6-phosphate amidotransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 976813..978693 GB:FROM 976813 GB:TO 978693 GB:DIRECTION + GB:GENE glmS GB:PRODUCT putative L-glutamine-D-fructose-6-phosphate amidotransferase GB:PROTEIN_ID BAD55721.1 LENGTH 626 SQ:AASEQ MCGIVGYVGYRDALGVVVDALRRMEYRGYDSAGVAILDGAGTLAVERKAGRLANLEAELAESGAGAFAGTTGMGHTRWATHGAPTDRNAHPHRDAGGKVAVVHNGIIENFAPLRRELEDAGVELRSDTDTEVAVHLVARAYAEGPTAGDFTASALAVLRRLEGAFTLVFVHADHPDTIIAARRNTPLVVGVGKGEMFIASDVTAFIEHTREAVELGQDQAVVITADSYTVTDFAGRGDGVRTRPYTIDWDIAAAEKGGHDYFMLKEIEEQPAAVADTLIGHFTTDEAGGRIVLDEQRLADQELREFDKVFVVACGSSYHAGLLAKYAIEHWTRLPVEVELASEFRYRDPVLDRSTLVVAISQSGETADTLEAVRHAKEQKARVLAICNTNGAQIPRESDAVLYTRTGPEIGVASTKAFLAQVAANYLVGLALAQARGTKYPDEVAREFQELEAMPKLVSRVLETAPQVRAIARELAHVPTVLFLGRHVGYPVALEGALKLKELAYMHAEGFAAGELKHGPIALIEDGLPVIVVMPSPKGRAVLHSKLLSNIREIQARGARTIVIAEEGDDTVRPFADDLIEIPSAPTLFQPLLSTVPLQIFAAEVAQTRGYDVDKPRNLAKSVTVE GT:EXON 1|1-626:0| BL:SWS:NREP 1 BL:SWS:REP 1->626|GLMS_MYCPA|0.0|77.8|622/624| SEG 49->76|agrlanleaelaesgagafagttgmght| SEG 493->504|alegalklkela| BL:PDB:NREP 1 BL:PDB:REP 2->626|2j6hA|e-110|39.9|606/608| RP:PDB:NREP 1 RP:PDB:REP 2->626|2bplA|e-115|40.7|607/608| RP:PFM:NREP 3 RP:PFM:REP 105->246|PF09147|6e-08|31.5|127/162|DUF1933| RP:PFM:REP 302->424|PF01380|4e-17|39.0|123/131|SIS| RP:PFM:REP 474->586|PF01380|5e-14|36.3|108/131|SIS| HM:PFM:NREP 4 HM:PFM:REP 304->427|PF01380|3.6e-37|37.1|124/131|SIS| HM:PFM:REP 475->605|PF01380|3.3e-22|27.8|126/131|SIS| HM:PFM:REP 2->43|PF00310|8.9e-06|34.1|41/362|GATase_2| HM:PFM:REP 67->197|PF00310|1.8e-17|24.6|122/362|GATase_2| GO:PFM:NREP 4 GO:PFM GO:0005529|"GO:sugar binding"|PF01380|IPR001347| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01380|IPR001347| GO:PFM GO:0005529|"GO:sugar binding"|PF01380|IPR001347| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01380|IPR001347| RP:SCP:NREP 2 RP:SCP:REP 2->235|1ao0A2|2e-46|22.2|221/230|d.153.1.1| RP:SCP:REP 253->626|1jxaA1|e-111|41.5|366/368|c.80.1.1| HM:SCP:REP 2->232|1ecfA2|5.8e-73|39.9|228/0|d.153.1.1|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| HM:SCP:REP 254->626|1moqA_|1.8e-116|46.3|365/0|c.80.1.1|1/1|SIS domain| OP:NHOMO 1566 OP:NHOMOORG 1101 OP:PATTERN 11212111222222222311111-2112121222211111112211111111111112211-1-2-11 2331211111111121111-11111411111113331111211121121111112111112221221223111111111111121222--111---1--1111111111111111111111111111112211122122211112221111111211111111111111111111111111113221122111111111111111111121111211111122123333323111111111111111111122211122121111111222121112221111111112111111111111111111111111211222111111111111111111111111111111112221111111111111111212211133111111113222111122122222222221-2232221114111222223323332211113212112221111111111111111221----------------------111111211111111545555233335542444433552112111111111111111111111111211111111111111111112121121121111221131222231211111111111111111111111111111111121131122222211222212112111-1111111-11111111111111111111-11-11111111111111113221111111111111111111111111111111111111111111--11111111111111111111121111-111111121111111122222222111111111222222222111111111111111121111111111111111112222---------1--------------------------111111222121- 1111111-311-22211111111112111111111111111111111111111111111111111111-1111112322211111111-12111112111211122122112222242221222532323C2-3251122222232222222232321425A22111911423332111H1111141231221521111 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--- STR:NPRED 625 STR:RPRED 99.8 SQ:SECSTR #cEEEEEEcccccHHHHHHHHHHHGGGcccEEEEEEEcTTccEEEEEEEcEEccHHHHHHHHHHccccccEEEEEEEccccccccGGGcccEEEccTTEEEEEEEccTTHHHHHHHHHHHTcccccccHHHHHHHHHHHHHTTccccccHHHHHHHHGGGccccEEEEEEETTcTTcEEEEEEccccEEEEccccEEEEccGGGTTTTccEEEEccTTcEEEEccccEEEEccEccccccccccEEccccTTTTccTTcccHHHHHHHTHHHHHHHHHTTcEHcTETTEEccGGGcTTHHHHHHHccEEEEEEcHHHHHHHHHHHHHHHHHccccEEEEEHHHHTTccccccTTEEEEEEEcccccHHHHHHHHHHHHTTcEEEEEEccTTcHHHHHccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHGGGTTccEEEEEEcGGGHHHHHHHHHHHHHHHccEEEEEEGGGGGGTGGGGccTTcEEEEEEcccTTHHHTHHHHHHHHHHHHHTTcEEEEEEETTccccccTTEEEEEEccccGGGHHHHHHHHHHHHHHHHHHHHTccccccTTcccccccc PSIPRED ccEEEEEEccccHHHHHHHHHHHHHHcccccEEEEEEccccEEEEEEccccHHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccEEcccccEEEEEccEEccHHHHHHHHHHcccEEEccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccEEEEEEEcccccEEEEccccccEEEEEccccEEEccccccccccccEEEEcccccEEEEccccEEEEEEcccccccEEEEEEEEcccccccccccHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHHHHHccccEEEEccHHHHHcccccccccEEEEEEcccccHHHHHHHHHHHHccccEEEEEcccccHHHHHccEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHcccEEEEEEccccHHHHHHHHHHHHHHcccEEEEEEHHHccccEEEEEccccEEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEEccccHHHHHccccEEEcccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEcc //