[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : glnA
DDBJ      :glnA         putative glutamine synthetase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  783/915 : Eukaryota  149/199 : Viruses  0/175   --->[See Alignment]
d.128.1d.15.9
:446 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->437 1f1hA PDBj 4e-60 38.0 %
:RPS:PDB   3->444 2bvcA PDBj e-111 31.7 %
:RPS:SCOP  5->104 1f1hA1  d.15.9.1 * 2e-23 38.5 %
:RPS:SCOP  108->446 1f1hA2  d.128.1.1 * 4e-97 35.6 %
:HMM:SCOP  4->106 1htqA1 d.15.9.1 * 6.4e-29 46.5 %
:HMM:SCOP  106->446 1htqA2 d.128.1.1 * 2.6e-116 46.2 %
:RPS:PFM   18->97 PF03951 * Gln-synt_N 3e-16 52.6 %
:RPS:PFM   108->357 PF00120 * Gln-synt_C 2e-60 49.2 %
:HMM:PFM   107->357 PF00120 * Gln-synt_C 1.2e-95 50.8 248/258  
:HMM:PFM   16->100 PF03951 * Gln-synt_N 1.3e-27 48.2 83/84  
:BLT:SWISS 1->446 GLNA2_MYCTU 0.0 83.4 %
:PROS 234->249|PS00181|GLNA_ATP

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56506.1 GT:GENE glnA GT:PRODUCT putative glutamine synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1809685..1811025 GB:FROM 1809685 GB:TO 1811025 GB:DIRECTION + GB:GENE glnA GB:PRODUCT putative glutamine synthetase GB:PROTEIN_ID BAD56506.1 LENGTH 446 SQ:AASEQ MDRQKEFVLRTLEERDIRFVRLWFTDVLGYLKSVAIAPAELEGAFEEGIGFDGSAIEGFARVSEADMVARPDPSTFQVLPWATSKGHQHSARMFCDITMPDGSPSWADPRHVLRRQLNKAGDVGFSCYVHPEIEFFLLENGPQDGSPPRPADSGGFFDQAVHDAAPNFRRHAIDALESMGISVEFSHHEGAPGQQEIDLRYADALSMADNVMTFRYLIKEVAIDEGVRATFMPKPFAEWPGSAMHTHMSLFEGETNAFADPDDPDNLSATARAFIAGILEHASEISAITNQWVNSYKRLIHGGEAPTAASWGRSNRSALVRVPMYTPNKASSRRVEIRSPDSACNPYLTFAVLLAAGMRGIEKGYTLPPEAEDDVWSLTSAERRAMGFRELPGTLDEALQAMERSELVAETLGEHVFDFFLRNKRREWADYRSQVTPFELREYLGL GT:EXON 1|1-446:0| BL:SWS:NREP 1 BL:SWS:REP 1->446|GLNA2_MYCTU|0.0|83.4|446/446| PROS 234->249|PS00181|GLNA_ATP|PDOC00162| BL:PDB:NREP 1 BL:PDB:REP 6->437|1f1hA|4e-60|38.0|421/468| RP:PDB:NREP 1 RP:PDB:REP 3->444|2bvcA|e-111|31.7|435/475| RP:PFM:NREP 2 RP:PFM:REP 18->97|PF03951|3e-16|52.6|76/80|Gln-synt_N| RP:PFM:REP 108->357|PF00120|2e-60|49.2|248/256|Gln-synt_C| HM:PFM:NREP 2 HM:PFM:REP 107->357|PF00120|1.2e-95|50.8|248/258|Gln-synt_C| HM:PFM:REP 16->100|PF03951|1.3e-27|48.2|83/84|Gln-synt_N| GO:PFM:NREP 5 GO:PFM GO:0004356|"GO:glutamate-ammonia ligase activity"|PF03951|IPR008147| GO:PFM GO:0006542|"GO:glutamine biosynthetic process"|PF03951|IPR008147| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF03951|IPR008147| GO:PFM GO:0004356|"GO:glutamate-ammonia ligase activity"|PF00120|IPR008146| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF00120|IPR008146| RP:SCP:NREP 2 RP:SCP:REP 5->104|1f1hA1|2e-23|38.5|96/100|d.15.9.1| RP:SCP:REP 108->446|1f1hA2|4e-97|35.6|334/368|d.128.1.1| HM:SCP:REP 4->106|1htqA1|6.4e-29|46.5|99/0|d.15.9.1|1/1|Glutamine synthetase, N-terminal domain| HM:SCP:REP 106->446|1htqA2|2.6e-116|46.2|338/374|d.128.1.1|1/1|Glutamine synthetase/guanido kinase| OP:NHOMO 1953 OP:NHOMOORG 998 OP:PATTERN 11-11123323333331121111111111112111111111112123121222111111111111-22 2234322322222324444-45223A444442999933554555422222224323231123424244432222222211114111111111-1------------121---------------------------333332112411141111222111221111211221111111111112111121132111111-11111111122111111112231121111112211111111111111121111111122111111111221111111111111111111111111111111111111111111111111111113--11111111112-1111111111--11113115372133411-11--111333122222135341114113133333333334-34233332386256655556658745111354555565711111111411131342221122211-------------------3122311111145545422222443533332345211311111233111124214111141342111111111112211211111-11111-11111111111112211111111111111111111111111111221111211113433322322222223233---1123------13111112221211122-2222211222212222221222111111111111111111111422222222111111111111111-111111222211353111111111-1111122222221114188889887989884455---------31112111111211122333334441111111-111111------------------------------------22122121111-- 111122--1-1-112212224526364332212433322212221222133334331222222-1--------11-----------1--46213281111111333--212112122-11-12-11111271-21211111-11111-1-21-112112133481---12--311112-----11611131211----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 445 STR:RPRED 99.8 SQ:SECSTR #cccHHHHHHHHHHTTccEEEEEEEcccccEEEEEEGGGccHHHHHTcEEEETTccTTcccGGGcEEEEEEcGGGcEEcccccccEEEEcEEEEEEEEcTTccccTTcHHHHHHHHHHHHHHHcccEEEEEEEcEEEEcEEEEEEccccccTTccccccTTTcccHHHHHHHHHHHHHTTccEEEEEEcccTTEEEEEEccEEHHHHHHHHHHHHHHHHHHHHHTTcEEEccccccTTcccccEEEEEEEEETTEEccccTTcGGGccHHHHHHHHHHHHHHHHHHHHHcccTTHHHHccTTccccccccEEETcTTccEEEcHcccccTTcccEEEccccccccHHHHHHHHHHHHHHHHHTTccccccccccGGGccHHHHHccTcccccccHHHHHHHHHHccHHHHcccHHHHHHHHHHHHHTHHHHHTcccHHHHHHHTcH DISOP:02AL 1-3| PSIPRED ccccHHHHHHHHHHccccEEEEEEEccccEEEEEEEcHHHHHHHHHcccccccccccccccccccEEEEEEEHHHcEEcccccccccccEEEEEEEEEccccccccccHHHHHHHHHHHHHHcccEEEEEccEEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccccccEEEEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEcccccEEEEEEcccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHHcccccccccccHHccccHHHHHcccHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHccc //