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Nocardia farcinica IFM 10152 (nfar0)
Gene : glpD
DDBJ      :glpD         putative glycerol-3-phosphate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  17/68 : Bacteria  582/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
b.29.1c.3.1d.16.1
:577 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   54->528 2rgoA PDBj 6e-49 32.4 %
:RPS:PDB   14->544 3da1A PDBj 4e-26 22.4 %
:RPS:SCOP  103->266 1uaiA  b.29.1.18 * 2e-36 7.7 %
:RPS:SCOP  259->346 1c0iA2  d.16.1.3 * 2e-10 18.1 %
:HMM:SCOP  22->329 1el5A1 c.3.1.2 * 5.1e-39 25.7 %
:RPS:PFM   155->347 PF01266 * DAO 3e-12 37.5 %
:HMM:PFM   28->364 PF01266 * DAO 4.4e-55 30.7 313/358  
:BLT:SWISS 10->574 GLPD2_MYCTU 0.0 77.7 %
:PROS 32->49|PS00977|FAD_G3PDH_1
:PROS 376->386|PS00978|FAD_G3PDH_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55817.1 GT:GENE glpD GT:PRODUCT putative glycerol-3-phosphate dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1073596..1075329 GB:FROM 1073596 GB:TO 1075329 GB:DIRECTION + GB:GENE glpD GB:PRODUCT putative glycerol-3-phosphate dehydrogenase GB:PROTEIN_ID BAD55817.1 LENGTH 577 SQ:AASEQ MTKRPQSQCLGPEQRRTAWERLGKEHFDVVVVGGGVVGAGIALDAATRGLDVALVEARDLASGTSSRSSKMFHGGLRYLEQLEFGLVREALRERELALSTLSPHLVKPLRFLYPLTHRGWERPYVASGLVLYDTMGGAKSVPGQRHLTRHGALRLAPGLRRDALIGGVSYYDTVVDDARHTMTVARTAAHYGAVIRTSTQVVGFLREADRVVGVKIRDTEDGRTGEVRAHVVINATGVWTDEVQALSQTRGRFHVRASKGVHVVVPRDRIVSDTALILRTATSVLFVIPWGAHWIIGTTDTDWNLDLAHPAATKADIDYLLDRVNQVLVTPLTHDDITGVYAGLRPLLAGESDSTSKLSREHAVARIAPGLVAIAGGKYTTYRVMAYDAVDEAAQDIPARVSPSITEKVPLLGADGYFALVNQTVQLAEMYGVHPYRIKHLLDRYGSLIDEVMVLAQDRPELLQPITAAPSYLRVEAVYAAAAEGALHLDDILARRTRISIEYAHRGADCAEEVARLVAPVLGWDEAEIEREIDTYRSRVEAEVRSQTQPDDASADALRIAAPEPRPQILEPVPSEG GT:EXON 1|1-577:0| BL:SWS:NREP 1 BL:SWS:REP 10->574|GLPD2_MYCTU|0.0|77.7|565/585| PROS 32->49|PS00977|FAD_G3PDH_1|PDOC00753| PROS 376->386|PS00978|FAD_G3PDH_2|PDOC00753| SEG 29->38|vvvvgggvvg| SEG 475->486|veavyaaaaega| BL:PDB:NREP 1 BL:PDB:REP 54->528|2rgoA|6e-49|32.4|469/557| RP:PDB:NREP 1 RP:PDB:REP 14->544|3da1A|4e-26|22.4|473/482| RP:PFM:NREP 1 RP:PFM:REP 155->347|PF01266|3e-12|37.5|184/354|DAO| HM:PFM:NREP 1 HM:PFM:REP 28->364|PF01266|4.4e-55|30.7|313/358|DAO| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01266|IPR006076| RP:SCP:NREP 2 RP:SCP:REP 103->266|1uaiA|2e-36|7.7|156/223|b.29.1.18| RP:SCP:REP 259->346|1c0iA2|2e-10|18.1|83/95|d.16.1.3| HM:SCP:REP 22->329|1el5A1|5.1e-39|25.7|276/0|c.3.1.2|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 1108 OP:NHOMOORG 784 OP:PATTERN ------121111111--1------1111121------------------------------------- 111-211-111-1-22223-421123222222222223221222111-1111222114--33211332321-----------1----------1-------1--111111---------------------------1111---2121---------11111111------------------111-1---111111111111111111211111111111212111111111111111111111111111111---12-----11--11111---1111111---1--111111111111111111111111111---1111----------------------------2--1------------------1-1-----11-11-2231111121122222222225-11111212221-433121344153111--1121112221111111112222--11------------------------------1212-111111112111111122111111112111122--11111111211221112----1--------11-1111242-222-11221-1-1111---111112-1---------------------------221121--121111111-211111111122--11-1-------21222212222222222-2222222222222222223222221122222222222222222222222221-222222212222----111111111-13111111111111111111111111-1-1122221211211112111111111111-222222222111221111111---1111--11331122111111-1----------------------------------------- 11--1---411-111-1111111211122222211111111112221111122211111111111111111111111-11111112-1-12111-122211112121112211111111111112313-492-112111111111111-11112111111322313171235211111181111111321121121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 530 STR:RPRED 91.9 SQ:SECSTR #############TcHHHHHHHTTccEEEEEEcccHHHHHHHHHHHTTTccEEEEEccTTcccGGGccccEEcccHHHHHHHHHHcTTTcEEEEEEEEccHHHHHTccEEccEEcEEEEEccHHHHTTHHHHHHHHHHTTcccccEEcHHHHHHHcTTcccTTccEEEEEEEEEccHHHHHHHHHHHHHTTcEEEEcEEEEEEEETTEEEEEEEEEEETTTccEEEEEEEEEEEccGGGHHHHHHTTTcccccEEEEEEEEEEEEEGGGcccccEEEEcccccccEEEEEETTEEEEccccEEEcccTTccccHHHHHHHHHHHHHcTTccccTTTEEEEEEEEEEEEEcccEEEcccccEEEcccccTTHHHHHHHHHHHHHHHTccccccTTccccTTGcTTccccccTTccTTHHHHHHHHHHHHHTTTccHHHHHHHHHHHGGGHHHHHHHHHHTHHHHHHTTccHH#HHHHHHHHHHHHccccHHHHHHTTccHHHHcHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHc################################# DISOP:02AL 1-3, 12-21, 549-557, 575-577| PSIPRED cccccccHHccccccccHHHHHccccEEEEEEcccHHHHHHHHHHHHccccEEEEEcccccccccHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHHHHHcccccEEEcHHHHHHHccccccccEEEEEEEcccEEcHHHHHHHHHHHHHHcccEEEEccEEEEEEEEccEEEEEEEEEEccccEEEEEEcEEEEEccHHHHHHHHHccccccccEEEEEEEEEEEccccccccEEEEEcccccEEEEEEcccEEEEcccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEcccccccccccccccccccccEEEEccccEEEEEccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHccccHHHHHHHHcccHHHcccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHccccHHHHHHHccccccc //