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Nocardia farcinica IFM 10152 (nfar0)
Gene : glpD2
DDBJ      :glpD2        putative glycerol-3-phosphate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  532/915 : Eukaryota  174/199 : Viruses  0/175   --->[See Alignment]
b.29.1c.3.1d.16.1
:514 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   55->492 2rgoB PDBj 3e-34 31.6 %
:RPS:PDB   52->106,218->409 1c0iA PDBj 6e-10 13.9 %
:RPS:SCOP  52->83 1kdgA1  c.3.1.2 * 5e-04 15.6 %
:RPS:SCOP  124->251 1uaiA  b.29.1.18 * 1e-06 9.1 %
:RPS:SCOP  258->353 1c0iA2  d.16.1.3 * 5e-08 16.3 %
:HMM:SCOP  10->281 1jnrA2 c.3.1.4 * 1.5e-30 32.4 %
:HMM:SCOP  256->356 1ng4A2 d.16.1.3 * 4.7e-08 36.4 %
:RPS:PFM   234->358 PF01266 * DAO 5e-04 41.2 %
:HMM:PFM   32->389 PF01266 * DAO 1.2e-48 27.6 340/358  
:BLT:SWISS 51->497 GLPD1_MYCTU e-111 52.3 %
:PROS 36->53|PS00977|FAD_G3PDH_1
:PROS 383->393|PS00978|FAD_G3PDH_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56188.1 GT:GENE glpD2 GT:PRODUCT putative glycerol-3-phosphate dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1504181..1505725) GB:FROM 1504181 GB:TO 1505725 GB:DIRECTION - GB:GENE glpD2 GB:PRODUCT putative glycerol-3-phosphate dehydrogenase GB:PROTEIN_ID BAD56188.1 LENGTH 514 SQ:AASEQ MTNHAERYGNSALDAARRTRELHQLGDLGTVDVLVVGGGVTGAGAALDAASRGLRTVLVERHDLAWGTSRWSSKLVHGGLRYLAGGRVGIARESAIERGILLGTVAPHLVRPLPQLVPLLPGIGRAQQALIRAGFLAGDALRRSAGTPAATLPRARRVAAAEALRLAPTVRRAGLRGGLQAWDGQLVDDARLVVALARTAAAHGALVLTRVSAEAITGDSAVLRDTLTDETLTVSAKAVINATGVWADQLDPSISLRPSRGTHLVFAAEAFAGLSASLTVPVPGSVGRFVFAFPAAHNRVYLGLTDEDAPGPVPDEPQPTDAEVDFLLDTVNPALREPLTRADIRGRYAGLRPLLRTGDGNTADISREHAVLHSPSGVFTIVGGKLTTYRRMAQDVVDAAVRAYRLPAGPCRTHTLPLVGAVAGAARDRIAAPPLLVDRYGSEAPQILALGERDPALREPVGPGLDVTAAEFAFARSHEAALTPDDLLDRRTRIGLVAADRAAALAAATAAFEG GT:EXON 1|1-514:0| BL:SWS:NREP 1 BL:SWS:REP 51->497|GLPD1_MYCTU|e-111|52.3|447/516| PROS 36->53|PS00977|FAD_G3PDH_1|PDOC00753| PROS 383->393|PS00978|FAD_G3PDH_2|PDOC00753| SEG 25->50|lgdlgtvdvlvvgggvtgagaaldaa| SEG 107->121|phlvrplpqlvpllp| SEG 154->167|rarrvaaaealrla| SEG 190->208|arlvvalartaaahgalvl| SEG 419->432|vgavagaardriaa| SEG 498->511|aadraaalaaataa| BL:PDB:NREP 1 BL:PDB:REP 55->492|2rgoB|3e-34|31.6|415/530| RP:PDB:NREP 1 RP:PDB:REP 52->106,218->409|1c0iA|6e-10|13.9|242/363| RP:PFM:NREP 1 RP:PFM:REP 234->358|PF01266|5e-04|41.2|119/354|DAO| HM:PFM:NREP 1 HM:PFM:REP 32->389|PF01266|1.2e-48|27.6|340/358|DAO| GO:PFM:NREP 1 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01266|IPR006076| RP:SCP:NREP 3 RP:SCP:REP 52->83|1kdgA1|5e-04|15.6|32/360|c.3.1.2| RP:SCP:REP 124->251|1uaiA|1e-06|9.1|121/223|b.29.1.18| RP:SCP:REP 258->353|1c0iA2|5e-08|16.3|86/95|d.16.1.3| HM:SCP:REP 10->281|1jnrA2|1.5e-30|32.4|222/357|c.3.1.4|1/1|FAD/NAD(P)-binding domain| HM:SCP:REP 256->356|1ng4A2|4.7e-08|36.4|88/88|d.16.1.3|1/1|FAD-linked reductases, C-terminal domain| OP:NHOMO 912 OP:NHOMOORG 706 OP:PATTERN -------------------------------------------------------------------- 1-1-211-----1-22223-421123222222222223221222111-1111221112--332-1332321-----------1----------1-------1--111111----------------------------------1111---------11111111------------------111-1---111111111111111111111111111111212111111111111111111111111111111----------11--11--1---1111111---1--111111111111111111111111111---1111----------------------------2--1------------------1-1-----11-11-1211111121122222222225---1--112121-3331213331321-1--1111112221111111112222--11------------------------------1212-1111111121-1111111111111112-11122--11111111211221112----1-----------1111232-122-11111-1-1111---111111-----------------------------12112---111-------1----1----12--1--1-------11111111111111111-1111111111111111112222111111111111111111111211111111-122222212222----111111111-1211111-11----1---11111111-1-1-22221211211112111111111111-111111111111111111111---1111----331122111111-1----------------------------------------- -1--1---311-111-1111111211122222211111111112221111112211111111111111111111111-11111111-1-12111-1222111121111-221111111---11123-1-482-1121-111-111111-11111111111311213-41235211111-8111-111321121121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 445 STR:RPRED 86.6 SQ:SECSTR ###################################################TTcEEEEEEcccTTcTTcTTccGGGccccccccccTTTcHHHHHHHHHHHHHHHHHHTccEEccHHHTTcTTcEEEEEccHHHHTTHHHHHHHHTcHHTTccccEEEEHHHHHHHcTTccEcccEEEEETTcEEEHHHHHHHHHHHHHHTTcEEEccccEEEEEEcTcEEEEcccccGGGTcccccEEEEccGGGGGTccTTccTTEEEEEEEEEEEEccccccccEEEEEcccTTccEEEEEETTTEEEEEcccEEETcccccccHHHHHHHHHHHHHHcGGGcccGGGcEEEEEEEEEEEEEcccTTTcccccccccEEEEEEEEEccGGGHHHHHHHHHHHHHHHHHHHHHHTccccccccccTcccTTccccTTcccHHHHHHHHTTTHHHHHHHccccTTccHcccTTccHHHHHHHHHHHHccccccHHHHTTcccGGG################## DISOP:02AL 1-4, 16-25| PSIPRED cccccccccccccccccHHHHHHHHccccEEEEEEEcccHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHccccccccEEEEEEEccccEEcHHHHHHHHHHHHHHcccEEEEccEEEEEEEccEEEEEEEEccEEEEEEEEEEEEccccHHHHHHHccccccccEEEEEcccccccccccEEEEcccccccEEEEEEccccEEEEccccccccccccccccccHHHHHHHHHHHHHHcccccccccEEEEEccEEcccccccccccccccccEEEEcccccEEEEccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHcccHHHcccccccccHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHcc //