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Nocardia farcinica IFM 10152 (nfar0)
Gene : gltB
DDBJ      :gltB         putative glutamate synthase large subunit
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  660/915 : Eukaryota  133/199 : Viruses  0/175   --->[See Alignment]
b.80.4c.1.4d.153.1
:1548 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   25->1520 2vdcA PDBj 0.0 46.1 %
:RPS:PDB   25->1525 1ea0A PDBj e-154 44.7 %
:RPS:SCOP  25->459 1ea0A3  d.153.1.1 * 3e-79 40.5 %
:RPS:SCOP  457->1246 1ea0A2  c.1.4.1 * 0.0 48.5 %
:RPS:SCOP  1262->1525 1ea0A1  b.80.4.1 * 2e-94 45.8 %
:HMM:SCOP  25->461 1llwA3 d.153.1.1 * 2e-192 54.2 %
:HMM:SCOP  472->1248 1ea0A2 c.1.4.1 * 4.4e-265 48.5 %
:HMM:SCOP  1260->1531 1ea0A1 b.80.4.1 * 3.3e-100 53.3 %
:RPS:PFM   210->406 PF00310 * GATase_2 4e-51 65.1 %
:RPS:PFM   481->777 PF04898 * Glu_syn_central 4e-84 51.9 %
:RPS:PFM   874->1210 PF01645 * Glu_synthase e-126 68.0 %
:RPS:PFM   1292->1467 PF01493 * GXGXG 1e-59 64.4 %
:HMM:PFM   841->1210 PF01645 * Glu_synthase 3.4e-157 59.3 364/368  
:HMM:PFM   25->407 PF00310 * GATase_2 1.8e-137 52.1 359/362  
:HMM:PFM   484->778 PF04898 * Glu_syn_central 3.6e-118 54.0 285/288  
:HMM:PFM   1289->1468 PF01493 * GXGXG 4.9e-64 51.7 180/202  
:BLT:SWISS 7->1545 GLTB_SYNY3 0.0 56.5 %
:PROS 432->444|PS00018|EF_HAND_1
:PROS 180->191|PS00806|ALDOLASE_CLASS_II_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD54938.1 GT:GENE gltB GT:PRODUCT putative glutamate synthase large subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 84525..89171 GB:FROM 84525 GB:TO 89171 GB:DIRECTION + GB:GENE gltB GB:PRODUCT putative glutamate synthase large subunit GB:PROTEIN_ID BAD54938.1 LENGTH 1548 SQ:AASEQ MTQLPGHRSPGPIGLYDPANEHDACGVAFVVDMHGRRSRDIVDKAITALLNLEHRGAAGAEPNSGDGAGILIQIPDRFFRAIVDFELPPEGSYASGIAFLPQARREAARAAYGVEKIVKEEGLEVLGWREVPIDDSSLGALSRDAMPTFRQIFIASPRTGAEQLSGMDLERRAYVIRKRVEHELGTQGAGEGATGRETVYFPSLSGQTFVYKGMFTTPQLRAFYLDLQDDRVESALGIVHSRFSTNTFPSWPLAHPFRRVAHNGEINTVTGNENWMRAREALLNSDVFGTDAAGKNRLEKIFPVCTPGASDTARFDEVLELLHLGGRSLPHAVLMMIPEAWERHDSMDPQLRAFYEYHSMLMEPWDGPASVCFTDGTVVGAVLDRNGLRPSRIWVTDDGLVVMASEVGVLDIDPAKVVRKARLQPGRMFLVDTSQGRIVDDHEIKTQLAAEHPYQQWLDEGVTRLADLPDRPHVHMSHDRVLIRQQIFGYTTEELSLLISPMAKTGGEALGSMGTDTPIAVLSSRPRLLFDYFSQLFAQVTNPPLDAIREEVVTSLKRNLGSEADLLHPGPESCKQIAIEQPILDNDELAKLVHINDDGSQPDLRSVVVRGLYPVKKGGKGLRKALQAINTQVSAAIEGGARIIVLSDRESNEKLAPIPSLLLTSSVHHHLVRERTRTKVGLIVEAGDAREVHHMAMLVGFGAGAINPYMAFETIEDMLERGALDLGTGDLASDYRKAVANYIKAAGKGVLKVMSKMGISTLASYNGAQLFQVIGLSQELVDEYFTGLRSHLDGIGLDEIADDVAARHRIAFLENRNERAHRELEVGGEYQWRREGEYHLFNPDTVFKLQHATRTGQYSIFKEYTKLVDDQSERLASLRGLFKFKKGERAPIPIDEVEPASEIVKRFSTGAMSYGSISAEAHETLAIAMNRLGGRSNSGEGGEHPARFEVEENGDWRRSAIKQVASGRFGVTAHYLTNCTDIQIKMAQGAKPGEGGQLPAHKVYPWVAEVRHSTPGVGLISPPPHHDIYSIEDLAQLIHDLKNANPQARIHVKLVAEPGVGTVAAGVSKAHADVVLISGHDGGTGASPLTSLKHAGGPWELGLAETQQTLLLNGLRDRIVVQVDGQMKTGRDVMIAALLGAEEYGFATAPLVVSGCVMMRVCHLDTCPVGVATQNPVLRERFTGKPEFVENFFLFIAEEVRELLAQLGFRTLDEAIGRVDLLDTSKAKQHWKASKLDLSPILDDIETAFMFQDRRCTKSQDHGLDRALDQQLITEAREALERGKPVKIDTKITNVNRTVGTMLGHEVTKLYGGAGLPDDTIDITFTGSAGNSFGAFVPAGITLRVQGDANDYVGKGLSGGHLVVRPAPNAPAEFVADQNIIAGNVILFGATSGKAFISGVVGERFAVRNSGATAVVEGVGDHGCEYMTGGRVVILGETGRNFGAGMSGGVAFVYDPNGTFAARVNPEQRDALEPLAGDDFTWLRDIIAEHRDKTGSAVADRILSDWSQQVNHFVKVMPREYKKVLLAISEAEKSGKDVDEAIMEAARG GT:EXON 1|1-1548:0| BL:SWS:NREP 1 BL:SWS:REP 7->1545|GLTB_SYNY3|0.0|56.5|1506/1550| PROS 432->444|PS00018|EF_HAND_1|PDOC00018| PROS 180->191|PS00806|ALDOLASE_CLASS_II_2|PDOC00523| SEG 660->672|sllltssvhhhlv| BL:PDB:NREP 1 BL:PDB:REP 25->1520|2vdcA|0.0|46.1|1450/1472| RP:PDB:NREP 1 RP:PDB:REP 25->1525|1ea0A|e-154|44.7|1438/1452| RP:PFM:NREP 4 RP:PFM:REP 210->406|PF00310|4e-51|65.1|166/175|GATase_2| RP:PFM:REP 481->777|PF04898|4e-84|51.9|287/288|Glu_syn_central| RP:PFM:REP 874->1210|PF01645|e-126|68.0|331/342|Glu_synthase| RP:PFM:REP 1292->1467|PF01493|1e-59|64.4|174/195|GXGXG| HM:PFM:NREP 4 HM:PFM:REP 841->1210|PF01645|3.4e-157|59.3|364/368|Glu_synthase| HM:PFM:REP 25->407|PF00310|1.8e-137|52.1|359/362|GATase_2| HM:PFM:REP 484->778|PF04898|3.6e-118|54.0|285/288|Glu_syn_central| HM:PFM:REP 1289->1468|PF01493|4.9e-64|51.7|180/202|GXGXG| GO:PFM:NREP 9 GO:PFM GO:0008152|"GO:metabolic process"|PF00310|IPR000583| GO:PFM GO:0006807|"GO:nitrogen compound metabolic process"|PF04898|IPR006982| GO:PFM GO:0015930|"GO:glutamate synthase activity"|PF04898|IPR006982| GO:PFM GO:0055114|"GO:oxidation reduction"|PF04898|IPR006982| GO:PFM GO:0006537|"GO:glutamate biosynthetic process"|PF01645|IPR002932| GO:PFM GO:0015930|"GO:glutamate synthase activity"|PF01645|IPR002932| GO:PFM GO:0008152|"GO:metabolic process"|PF01493|IPR002489| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01493|IPR002489| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01493|IPR002489| RP:SCP:NREP 3 RP:SCP:REP 25->459|1ea0A3|3e-79|40.5|415/419|d.153.1.1| RP:SCP:REP 457->1246|1ea0A2|0.0|48.5|759/763|c.1.4.1| RP:SCP:REP 1262->1525|1ea0A1|2e-94|45.8|262/270|b.80.4.1| HM:SCP:REP 25->461|1llwA3|2e-192|54.2|417/422|d.153.1.1|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| HM:SCP:REP 472->1248|1ea0A2|4.4e-265|48.5|756/0|c.1.4.1|1/1|FMN-linked oxidoreductases| HM:SCP:REP 1260->1531|1ea0A1|3.3e-100|53.3|270/0|b.80.4.1|1/1|Alpha subunit of glutamate synthase, C-terminal domain| OP:NHOMO 1278 OP:NHOMOORG 841 OP:PATTERN ---1--1111111111121111111--111112131112111112-21111111-1-----1------ 11113--111111121111-13112311111234442476122211-11111121222--112111231211111111----111111--1111-----1-213222212---------------21122311232111111111121211121111111111121111111111111111111111121-122222222221222222111122222211-21211111132-2222222222222222122----11---------11----1-111--------11----------------------------------21-11-------1-1-111------1--1111211111-1-111114---2111111-----142332122222211111111111-22122122112-1221111111112221223111112231111111121111311-----------------------------4213112222222222222222222322222222211111222212111211222222111111-------11111111213221113333-121122232111111111--1-11111----------2111311111222422222232312322223233223---3222------1111111111111-111-1111111111111111111111111111111--1---11111121111111--111111111111---111111111112222-----------1---222221312222222232223343312221-111111-21112222222342222111111111111111-221222--------------------------------------1--1-111111 11----1-1---11111121111111111211111111111111111111111122111111111111-11-11121-1111111111-12111111111121212-12-2---------------------------------------------------133154114115-1222V1113262281452272122 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1514 STR:RPRED 97.8 SQ:SECSTR ########################cEEcEEEETTccccHHHHHHHHHHHTccGGGccccTTccccccccEEEEccHHHHHHHHHHcccccccEEEEEEEEccccHHHHHHHHHHHHHHHHTTcEEEEEEEccccGGGccHHHHHHccEEEEEEEEcTTcccHHHHHHHHHHHHHHHHHHHHHHTcccEEEEccHHHHHcEEEEEEccEEEccccccGGGHHHHcGGGGcTTccccEEEEEEccccccccccTTccccccEEEEEccTTHHHHHHHHHHHGGGccccTTGGGccHHccHHHHcccccTTccHHHHHHHHHHHHHHTTccHHHHHHHHccccccHHHcccHHHHHHHHHHHHHcccccccEEEEEccccEEEEEccTTcccccEEEEETTcEEEEccccTTccccGGGEEEEEEccTTcEEEEETTTTEEEcHHHHHHHHHHTTTHHHHHTTcccTTHHHHTTccccccTHHHHHHHHTTTccHHHHHTTTHHHHHHccccEEccccccccGGGccccccGGGTEEEcccccccccccTTTTGGGccccEEEcccccTTcccGGGcccEEEccccccHHHHHHHHHHHGTcccccHGGEEEEEcEEcTTcTTHHHHHHHHHHHHHHHHHHHTccEEEEEcTTccTTEEEccHHHHHHHHHHHHHTTTcGGGcEEEEEccccccHHHHHHHHTTTccEEEcHHHHHHHHHHHTTTTTTTccHHccHHHGHHHHHHHHHHHHHHHHHHHTTTcccHHHHTTcccEEEccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHTcHHHHHHHHHHHHTcccHHccGGGGEEEcccccccccGGGcccHHHHHTTEEEEEcccTTccHHHHHHHHHHHHHTTcEEEccTTcccGGGccccTTcccccccEEEEccccTTccHHHHTcccEEEEEcccTTcTTTccEEcGGGccHHHHHHHTccTTccEEcccccTTcccHHHHHHHHHHHHHHcTTcEEEEEEEccTTHHHHHHHHHHTTccEEEEEcTTcccccEETTHHHHccccHHHHHHHHHHHHHTTTcTTTcEEEEEcccccHHHHHHHHHTTccEEEccHHHHHHHTccccccTTTTccTTccccccTTGGGcccccHHHHHHHHHHHHHHHHHHHHHHTccccGGGTTcEEEEcEcccccTTcHHHHHHGGGEEEcccccHHHHccccccccccccccTHHHHHHHTHHHHHHcccEEEEEEEcTTcccTTHHHHHHHHHHTTTTcccTTcEEEEEEEEEcccTTTTccTTEEEEEEEEEcccTTTTcEEEEEEEEccTTccHHccGGGcEEEcccTTTTccEEEEEEccEEcTTTTTTcEEEEEEEccccccTTTTccEEEEccccccccccTTTccccEEccccTTccHHHHccGGGEEEEccccTTHHHHHHHHHHHHHHHHccHHHHHHHHTHHHHHTTccEEEEGGGGGGcHcHHHHHHTTcEE########## DISOP:02AL 1-13, 472-474, 1547-1548| PSIPRED cccccccccccccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHccccccccccccccccEEHHHHHHHHHHHHHcccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccHHHHcccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEccccHHHHHHcccHHHHHHHHHccccccccccEEEEEEccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHcccccccccccHHHHHHHccccccccccHHHHHHHHHHHHHccccHHHHHHHHcccHHcccccccHHHHHHHHHHHHHHccccccEEEEEEcccEEEEEEcccccEEEEEEEEEccEEEEEEccEEEEcccccEEEcccccccEEEEEEccccEEEcHHHHHHHHHHcccHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHccccEEEccccccccHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHEEEEEEcccccccccccccccEEEEEcccccHHHHHHHHHHccccccccccEEEEEEcccHHccHHHHHHHHHHHHHHHHHHHHcccEEEEEEccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHccccccccccccHHHHHHHHHHHHHHHccccccccccccccccccEEEEcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccccccccccccccccccccccccHHHHHccEEEEccccccccHHHHHHHHHHHHHHccccccccccccHHHHccccccccccEEEEEEEcccccccHHHHcccEEEEEEEccccccccccccccccccHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHccccEEEEEccccccccHHHHHHHcccccHHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHccccccEEEEcccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHcccHHHccccccccHHHHccccHHHcccccccccccccEEEEEccccccHHHHHHHHHHHHHHHHHccccEEEEEEEEEEcccHHHHHHHHHHHHHHHccccccEEEEEEEEcccccHHHHcccccEEEEEEccccHHcccccccEEEEEccccccccccccccEEEEHHHEEcccccEEEEEEEcccEEEEEEcccEEEEEccccHHHHHHcccEEEEEccccccccccccccEEEEEcccccHHHHcccHHEEEEccccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccEEEccHHHHHHHHHHHHHHHHcccHHHHHHHHccc 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