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Nocardia farcinica IFM 10152 (nfar0)
Gene : gnd
DDBJ      :gnd          putative 6-phosphogluconate dehydrogenase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  653/915 : Eukaryota  187/199 : Viruses  0/175   --->[See Alignment]
a.100.1c.2.1
:480 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->471 2w90B PDBj e-155 57.4 %
:RPS:PDB   12->165 2cy0B PDBj 5e-22 16.2 %
:RPS:PDB   142->433 1cb8A PDBj 1e-73 8.5 %
:RPS:SCOP  10->183 1pgjA2  c.2.1.6 * 4e-26 45.3 %
:RPS:SCOP  181->475 1pgnA1  a.100.1.1 * e-110 52.7 %
:HMM:SCOP  6->181 1pgpA2 c.2.1.6 * 5.4e-53 40.3 %
:HMM:SCOP  181->477 1pgpA1 a.100.1.1 * 3e-137 59.5 %
:RPS:PFM   10->178 PF03446 * NAD_binding_2 6e-25 47.1 %
:RPS:PFM   183->471 PF00393 * 6PGD e-101 60.1 %
:HMM:PFM   183->472 PF00393 * 6PGD 1.1e-128 59.9 289/291  
:HMM:PFM   8->179 PF03446 * NAD_binding_2 3.7e-53 49.4 158/163  
:BLT:SWISS 6->471 6PGD2_BACSU e-148 54.2 %
:PROS 258->270|PS00461|6PGD
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56020.1 GT:GENE gnd GT:PRODUCT putative 6-phosphogluconate dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1302602..1304044 GB:FROM 1302602 GB:TO 1304044 GB:DIRECTION + GB:GENE gnd GB:PRODUCT putative 6-phosphogluconate dehydrogenase GB:PROTEIN_ID BAD56020.1 LENGTH 480 SQ:AASEQ MPTSTARAHIGVTGLAVMGSNIARNFARHGYTVALHNRSVAKTDALLAEHGGDGDFVRTETIEEFVAALERPRRVLIMVKAGEATDAVIEELAAAMEPGDIIIDGGNALYTDTIRREAALRERGLNFVGAGISGGEEGALNGPAIMPGGPAESYESLGPLLESIAAKVDGTPCCTHIGPDGSGHFVKMVHNGIEYADMQLIGEAYHLFRDALGFDAGQIAAVFTQWNSGDLESYLVEITAEVLNQVDAKTGRPLVDVIVDAAEQKGTGRWTVKSALDLGVPVTGIAEAVFARALSGSRAQRKAATGLAAGTLADRPTDVEQFTEDIRRALYASKVVAYAQGFDQIAAGSAEYGWNLRPGDLATIWRGGCIIRARFLNRIKEAYDKDPQLPSLILDPYFREAIEAGIDSWRRVVSTATLLGIPVPAFGSSLSYYDALRSPRLPAALTQAQRDYFGAHTYERIDADGKYHTLWSGDRSEVTA GT:EXON 1|1-480:0| BL:SWS:NREP 1 BL:SWS:REP 6->471|6PGD2_BACSU|e-148|54.2|465/469| PROS 258->270|PS00461|6PGD|PDOC00390| SEG 303->313|aatglaagtla| BL:PDB:NREP 1 BL:PDB:REP 6->471|2w90B|e-155|57.4|465/471| RP:PDB:NREP 2 RP:PDB:REP 12->165|2cy0B|5e-22|16.2|142/263| RP:PDB:REP 142->433|1cb8A|1e-73|8.5|283/674| RP:PFM:NREP 2 RP:PFM:REP 10->178|PF03446|6e-25|47.1|155/160|NAD_binding_2| RP:PFM:REP 183->471|PF00393|e-101|60.1|288/290|6PGD| HM:PFM:NREP 2 HM:PFM:REP 183->472|PF00393|1.1e-128|59.9|289/291|6PGD| HM:PFM:REP 8->179|PF03446|3.7e-53|49.4|158/163|NAD_binding_2| GO:PFM:NREP 7 GO:PFM GO:0004616|"GO:phosphogluconate dehydrogenase (decarboxylating) activity"|PF03446|IPR006115| GO:PFM GO:0006098|"GO:pentose-phosphate shunt"|PF03446|IPR006115| GO:PFM GO:0055114|"GO:oxidation reduction"|PF03446|IPR006115| GO:PFM GO:0004616|"GO:phosphogluconate dehydrogenase (decarboxylating) activity"|PF00393|IPR006114| GO:PFM GO:0006098|"GO:pentose-phosphate shunt"|PF00393|IPR006114| GO:PFM GO:0050661|"GO:NADP or NADPH binding"|PF00393|IPR006114| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00393|IPR006114| RP:SCP:NREP 2 RP:SCP:REP 10->183|1pgjA2|4e-26|45.3|172/178|c.2.1.6| RP:SCP:REP 181->475|1pgnA1|e-110|52.7|294/297|a.100.1.1| HM:SCP:REP 6->181|1pgpA2|5.4e-53|40.3|176/0|c.2.1.6|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 181->477|1pgpA1|3e-137|59.5|296/0|a.100.1.1|1/1|6-phosphogluconate dehydrogenase C-terminal domain-like| OP:NHOMO 1327 OP:NHOMOORG 852 OP:PATTERN -------------1----1111--11111-11------------------------------------ 1221311111111123322-2311242222223333229511213211122233311211221122444322111211----311---1111-1-------1--111112111111111111111111111111-133311---222121111111121122212112131111111121111111--11-3212222233212323332233132223211222111112121111111111221111111121212211111321133312223222-------1--11111111111-------------131---1111-2--1-------1---1-------1---11---221---1--1332------11112-----214233322121211121211112-2242332433113443332644523-111-22-1--11-1111111121111--------------------------------11-11-121123443322111-33432222122242213-----1--11232341-111311-11111111122--2-2---111-2---------1--11111112---------------------------11--12211121322222222222222222221-12--211111111111111111111111-1111111111111111111112111111111111111111111111111111-111111111111111----------2112111111111111111122112-1--1-12212131211111-211---------1222211111113111111111111------1-------11111111-12--------1------------------1--1111111- 11--111-311111122212222222222111122221112111211211131311111222111111-1111112223311111111-2412121112211122311-12111112111111115131281--13111111121111--1111-11-211122131331211216111H1111162481522211211 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 480 STR:RPRED 100.0 SQ:SECSTR HTEEcccccEEEEcccTHHHHHHHTccEEEEccGGGTTcccHHHHccccccEEEcHHHHHHHHHHHHHHHcccccEEEEEcccccTTTHHHHHHHTTTccEEEccTTHHHHHHHHTccccTTcccEEEEccEEccTTGGGTHHHHHHHHHHHHccccTTHHHHHHHHHHccTTcccTTccTTcccccccTTHHHHHHHHHHHHHHHcTTcTTTTcHHHHHHHHHHHHTHHHHHHHcHHHHHGGGccccHccHHHHHHHHHTTccccGGGccHHHHHHHHHHHHHHHTcHHHHHHTTcHHHHHHHTTccEEccccEEETTccEEcccccccTTTHHHHHHHHHHHHHHHHTTcTTcccHHHHHHHHETTEEcGGGcGGGGGcTTTTccGGcGHHHHHHHHHHcGGGHHHHHHHHHHHTTcccTTTTcccEEEEEHTcccccHHHHccTTcccEEccccEEEEcTTccEEEEEccccccccc DISOP:02AL 1-6, 473-480| PSIPRED cccccccccEEEEEHHHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHccccccccccccHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHcccccEEEEcccccHHHHHHHHHHHHHccccEEEccccccccccccccEEEccccHHHHHHHHHHHHHHcccccccccEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccEEHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccEEEccccccEEcccccccccccc //