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Nocardia farcinica IFM 10152 (nfar0)
Gene : ileS
DDBJ      :ileS         putative isoleucyl-tRNA synthetase
Swiss-Prot:SYI_NOCFA    RecName: Full=Isoleucyl-tRNA synthetase;         EC=6.1.1.5;AltName: Full=Isoleucine--tRNA ligase;         Short=IleRS;

Homologs  Archaea  68/68 : Bacteria  910/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
a.27.1b.51.1c.26.1
:1042 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->787 1ileA PDBj e-166 43.2 %
:RPS:PDB   22->870 2bteA PDBj e-116 17.7 %
:RPS:SCOP  22->216 1ileA3  c.26.1.1 * 4e-33 45.1 %
:RPS:SCOP  215->411 1ffyA2  b.51.1.1 * 7e-50 33.5 %
:RPS:SCOP  452->657 1iq0A2  c.26.1.1 * 8e-15 6.7 %
:RPS:SCOP  675->863 1gaxA5  a.27.1.1 * 5e-29 18.8 %
:HMM:SCOP  13->670 1ileA3 c.26.1.1 * 7.1e-121 33.0 %
:HMM:SCOP  672->893 1ivsA2 a.27.1.1 * 5.2e-49 35.9 %
:HMM:SCOP  959->1041 1ffyA1 a.27.1.1 * 6.4e-05 19.3 %
:RPS:PFM   28->649 PF00133 * tRNA-synt_1 e-131 47.0 %
:RPS:PFM   701->787 PF08264 * Anticodon_1 3e-10 39.1 %
:HMM:PFM   29->651 PF00133 * tRNA-synt_1 2e-193 37.3 590/601  
:HMM:PFM   701->840 PF08264 * Anticodon_1 2e-27 31.6 136/152  
:BLT:SWISS 1->1042 SYI_NOCFA 0.0 100.0 %
:PROS 59->70|PS00178|AA_TRNA_LIGASE_I
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56622.1 GT:GENE ileS GT:PRODUCT putative isoleucyl-tRNA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1932119..1935247 GB:FROM 1932119 GB:TO 1935247 GB:DIRECTION + GB:GENE ileS GB:PRODUCT putative isoleucyl-tRNA synthetase GB:PROTEIN_ID BAD56622.1 LENGTH 1042 SQ:AASEQ MADDSNSAYPRVDYGAGTGAAFPDLERRVLEAWAADDTFRASIENRSGAAEFVFYDGPPFANGLPHYGHLLTGYVKDVIPRFQTMRGKRVDRRFGWDCHGLPAEIEAEKQLGITDKSQIDAMGLAEFNAACKSSVLRYTGEWRDYVTRQARWVDFDNDYKTLDLDFMESVMWAFKSLYDKGLIYQGFRVLPYSWYEQTPLSNQETRLDDAYKMRQDPAVTVDMVLSVPGEHPLRELDGANALIWTTTPWTLPSNLAIAVHPDVRYVHLRAADGTRYVLAAERVSHYSREFGEDATVLAEFEGAALVGLSYRPPFDFFLGHPNAHRVLAADYVTTDSGTGVVHMAPAFGEEDMEVCSANDIELVQPLDPGGRFTSMVPPYEGLMVFDANPVIIKDLKAAGKLLRHETIEHSYPHSWRSGQPLIYMAVPSWFVAVTKFRDRMVELNKQITWVPEHIRDGQFGKWLEGARDWNISRNRYWGSPIPVWVSDDPAYPRVDVYGSLEELERDFGVRPTDLHRPAIDQLTRPNPDDPTGRSMMRRVPEVLDCWFESGSMPYAQVHYPFENKEWFDSHFPGDFIVEYNGQTRGWFYTLHVLATALFDSPAFKTVAAHGIVLGDDGLKMSKSKGNYPDVNEVFDRDGSDAMRWFLMSSPILRGGNLIVTERGIREGVSHALRPLWNAWTFLQLYASKPGEWRTDSTHVLDRYILAKLAQTRDGMTEALEVYDIAGACEELRTFADALTNWYVRRSRSRFWSEDRDAVDTLHTVLEVATRLAAPLLPLISEVIWRGLTGGRSVHLADWPAAADLPADPELVSTMDEVRTVCSTVLSLRKAKNLRVRLPLAEVTIAAPDAERLAPYADIVADEVNVKKVDLTTDVAVHGRFELAVNARAAGPRLGKDVQRVIKAVKAGDWTESADGVVSAAGITLLPEEYTQRLVAAEPESTAALPGNAGLVVLDSVVTEELEAEGWARDLVRELQETRKSLGLDVSDRIHVVLEVPEARRSWAQTHRDLIAGEILATSLEFGTAGEPAAELAGGVRASVRKA GT:EXON 1|1-1042:0| SW:ID SYI_NOCFA SW:DE RecName: Full=Isoleucyl-tRNA synthetase; EC=6.1.1.5;AltName: Full=Isoleucine--tRNA ligase; Short=IleRS; SW:GN Name=ileS; OrderedLocusNames=NFA_17760; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Metal-binding; Nucleotide-binding; Protein biosynthesis; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->1042|SYI_NOCFA|0.0|100.0|1042/1042| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 59->70|PS00178|AA_TRNA_LIGASE_I|PDOC00161| SEG 795->810|ladwpaaadlpadpel| BL:PDB:NREP 1 BL:PDB:REP 22->787|1ileA|e-166|43.2|736/821| RP:PDB:NREP 1 RP:PDB:REP 22->870|2bteA|e-116|17.7|798/876| RP:PFM:NREP 2 RP:PFM:REP 28->649|PF00133|e-131|47.0|572/593|tRNA-synt_1| RP:PFM:REP 701->787|PF08264|3e-10|39.1|87/153|Anticodon_1| HM:PFM:NREP 2 HM:PFM:REP 29->651|PF00133|2e-193|37.3|590/601|tRNA-synt_1| HM:PFM:REP 701->840|PF08264|2e-27|31.6|136/152|Anticodon_1| GO:PFM:NREP 12 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00133|IPR002300| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00133|IPR002300| GO:PFM GO:0005524|"GO:ATP binding"|PF00133|IPR002300| GO:PFM GO:0005737|"GO:cytoplasm"|PF00133|IPR002300| GO:PFM GO:0006412|"GO:translation"|PF00133|IPR002300| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00133|IPR002300| GO:PFM GO:0000166|"GO:nucleotide binding"|PF08264|IPR013155| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF08264|IPR013155| GO:PFM GO:0005524|"GO:ATP binding"|PF08264|IPR013155| GO:PFM GO:0005737|"GO:cytoplasm"|PF08264|IPR013155| GO:PFM GO:0006412|"GO:translation"|PF08264|IPR013155| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF08264|IPR013155| RP:SCP:NREP 4 RP:SCP:REP 22->216|1ileA3|4e-33|45.1|195/452|c.26.1.1| RP:SCP:REP 215->411|1ffyA2|7e-50|33.5|188/194|b.51.1.1| RP:SCP:REP 452->657|1iq0A2|8e-15|6.7|200/366|c.26.1.1| RP:SCP:REP 675->863|1gaxA5|5e-29|18.8|186/218|a.27.1.1| HM:SCP:REP 13->670|1ileA3|7.1e-121|33.0|449/453|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 672->893|1ivsA2|5.2e-49|35.9|217/218|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases| HM:SCP:REP 959->1041|1ffyA1|6.4e-05|19.3|83/273|a.27.1.1|2/2|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases|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a*62755442394483255326226433346CG46464745674544344o4554457AA5565465734 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 988 STR:RPRED 94.8 SQ:SECSTR #########ccccccccccccHHHHHHHHHHHHHHHTccccHcccccTTcEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHTTcEEEcccccccccHHHHHHHHHEccTTTTHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHHTTccccGGGcccTTcHHHHHHHHHHHHHHHHTTcEEEEEEEEEEETTTTEEEcGGGcTTccccccTTcccEEEEEcGGGGHHHHHHTTTHHHHHcEEccGGGGGGccEEEEcTTcTHHGHHcccHHHHHHHHHHHHHHHHccHHHHTTcTTccccEEEEEEEEcTTTTcHHTccEEEEEEcTTccTTcTTcEEEEcGGGcHHHHHHHHHTTccccccEcccccEEcccGGGTTccHHHHHHHHHHHHHHHTcEEEEEEccccccccEEccccHHcccccEEEETTTEEcTTccccccccccHHHccHccccccGGGGcHHHHEEEccccccEETTTHHHHTTTTcTTcccccccHHHHHHHccccEEEEcGGGTTTHHHHHHHHHHHHHHHHHTTcccccccccccEEcccEEEcEEEEEEEETTEEEccHHHHHHHcccccEEEHHHHHHTTcEEEEcTTccEEEEEcccccTTTTccccHHHHHHHccHHHHHHHHHccccHTTccEEEcHHHHHHHHHHHHHHHHHHHHTHHHHHTcccccccTTccTHHHHHHHHHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHHHHcHHHHHTHHccccHHHHHHHHHHHHHHTTTcHHHHHHHHHTTTccccGGcccTTTGTccccccHHHHccccEEEEEEETTEEEEEEEEcccccHHHHHHHHTTccccHHHHHcccEEEEETTTEEHHHHHTHHHHHHHHHHHHHHHHHHHTcccccTTTccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHTTccHHHHHHHHHHHHccccccccccccHHHHHHHHHH############################################# DISOP:02AL 1-2, 833-834, 906-908, 1041-1042| PSIPRED cccccccccccccccccccccHHHHHHHHHHHHHHcccccccccccccccEEEEEcccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHccccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccEEEccEEEEEcccccccccHHHHcccccEEEEEEEEEEEEEEEEcccccccccccccEEEEEccccHHHHcccEEEEcccccEEEEEEccccHHHHHHHHHHHHHHHcccccEEEEEcccHHHcccEEEcccccccccccEEEEEEccccccccccEEEEEcccccHHHHHHHHHcccccccEEccccEEccccccccccEEEcccHHHHHHHHHcccEEEEcccccccccccccccEEEEEEcccccccHHHHHHHHHHHHcccEEEcHHHHHHHHHHHHHHHHccEEEEEcccccEEEEEEcccccEEccccccHHHHHHHHHcccccccccccHHHHccccccccccccccccccccccEEEEHHHHHHHHcccccccHHHHHHcccccEEEEEHHHHHHHHHHHHHHHHHHcccccHHHHEEEcEEEcccccEEcccccccccHHHHHHHccHHHHHHHHHHcccccccccEEcHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHEEEEEcccHHHHHHHHHHHHHHHcHHHEEEEccccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEccEEEEcccEEEEEEEcccccEEEEEcccEEEEEEccccHHHHHccHHHHHHHHHHHHHHHcccccccEEEEEEEEcHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHccccEEEEEEEc //