[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : ilvA
DDBJ      :ilvA         putative threonine dehydratase
Swiss-Prot:             

Homologs  Archaea  37/68 : Bacteria  671/915 : Eukaryota  173/199 : Viruses  0/175   --->[See Alignment]
c.79.1d.58.14d.58.18
:451 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->262 3iauB PDBj 3e-39 39.6 %
:RPS:PDB   7->357 1a5aB PDBj 3e-38 18.0 %
:RPS:PDB   337->405 2bvzA PDBj 2e-13 13.2 %
:RPS:SCOP  20->364 1tdjA1  c.79.1.1 * 7e-49 30.8 %
:RPS:SCOP  338->411 1vs5F1  d.58.14.1 * 1e-15 16.4 %
:HMM:SCOP  8->396 1e5xA_ c.79.1.1 * 9.7e-104 39.4 %
:HMM:SCOP  358->452 1tdjA3 d.58.18.2 * 4.7e-22 38.6 %
:RPS:PFM   33->250 PF00291 * PALP 1e-10 30.1 %
:RPS:PFM   358->416 PF00585 * Thr_dehydrat_C 2e-06 42.1 %
:HMM:PFM   30->345 PF00291 * PALP 8.9e-74 38.5 278/297  
:HMM:PFM   358->450 PF00585 * Thr_dehydrat_C 5.1e-29 38.5 91/91  
:BLT:SWISS 12->450 THD1_MYCLE e-130 60.5 %
:PROS 58->71|PS00165|DEHYDRATASE_SER_THR
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56653.1 GT:GENE ilvA GT:PRODUCT putative threonine dehydratase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1971737..1973092) GB:FROM 1971737 GB:TO 1973092 GB:DIRECTION - GB:GENE ilvA GB:PRODUCT putative threonine dehydratase GB:PROTEIN_ID BAD56653.1 LENGTH 451 SQ:AASEQ MANPLELIDDLSPSRRALNADEIDAAAKRISDIIEPTPLQLSPRLSAATGARVYLKREDLTAVRSYKLRGAYNLIVQLDERERAAGVVAASAGNHAQGVAFACQAMGIQGRIYVPTTTPKQKRDRIRVHGGQFVELIAVGDTYDAAAAAAAADVERTGATMVAPFDDPRTAAGQGTIAVEILEQLGAAPDLVVVPVGGGGCLAGIGTYLRDRSPATGILAAEPAGAASMTAALIAGGPVTLPEIDPFVDGAAVRRVGALPYAAAVGFGGRVVTHASLPLLTAVDSPQGHGAFRLLQVDEGAICTTMLELYQNEGIIAEPAGALAVAALAEVDVEPGSTVVCLISGGNNDVSRYGEIIERSLVHQGLKHYFLVDFPQEPGALRRFLDEVLGPDDDITLFEYVKRNNRETGAALVGIELGAADGLDALLERIAASPIQCERLEPGSPAYRYLT GT:EXON 1|1-451:0| BL:SWS:NREP 1 BL:SWS:REP 12->450|THD1_MYCLE|e-130|60.5|418/427| PROS 58->71|PS00165|DEHYDRATASE_SER_THR|PDOC00149| SEG 145->152|aaaaaaaa| SEG 185->206|lgaapdlvvvpvggggclagig| SEG 317->335|aepagalavaalaevdvep| SEG 417->427|lgaadgldall| BL:PDB:NREP 1 BL:PDB:REP 23->262|3iauB|3e-39|39.6|235/342| RP:PDB:NREP 2 RP:PDB:REP 7->357|1a5aB|3e-38|18.0|328/389| RP:PDB:REP 337->405|2bvzA|2e-13|13.2|68/97| RP:PFM:NREP 2 RP:PFM:REP 33->250|PF00291|1e-10|30.1|216/293|PALP| RP:PFM:REP 358->416|PF00585|2e-06|42.1|57/91|Thr_dehydrat_C| HM:PFM:NREP 2 HM:PFM:REP 30->345|PF00291|8.9e-74|38.5|278/297|PALP| HM:PFM:REP 358->450|PF00585|5.1e-29|38.5|91/91|Thr_dehydrat_C| GO:PFM:NREP 5 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| GO:PFM GO:0004794|"GO:L-threonine ammonia-lyase activity"|PF00585|IPR001721| GO:PFM GO:0009097|"GO:isoleucine biosynthetic process"|PF00585|IPR001721| RP:SCP:NREP 2 RP:SCP:REP 20->364|1tdjA1|7e-49|30.8|318/331|c.79.1.1| RP:SCP:REP 338->411|1vs5F1|1e-15|16.4|73/100|d.58.14.1| HM:SCP:REP 8->396|1e5xA_|9.7e-104|39.4|363/477|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| HM:SCP:REP 358->452|1tdjA3|4.7e-22|38.6|88/91|d.58.18.2|1/1|ACT-like| OP:NHOMO 1532 OP:NHOMOORG 881 OP:PATTERN 11--1111111111111211111-31122121---------------1------------11111-11 225-111111111121111-121112111111222223221-11111-111111111111221-333131-1111111---1---------1-1---11-1112111221--------------------------33344---111-11--11---11111111-1212-1111111111114211111-12122222222122222221112122122311--1111111112222222222222211111----11-----------1-1-1-1-1-------11111111111111-------------111111111--21-11111111111-111111111-1-1111122-11-1-2------114-13333-11-111423111122121111-11-113-11311313551-2332448334232323234313223441111111131111-22------------111111111111------21421355343443433333233453333232452323113331243442325411211112111111111122111---1---11-----11111111-111111-111111111111-1-------11-11111122112-2111111111111111111111--11112------21111222222222222-2222222222222222222222321222222222222222222322222221-42222222222211-----------11332111111-111-111133333212211144444342243331222---------11111111111111122222221321111-11-11-----------------------1--------1------------11111-31 ----222----12222112121122312222123231211---122221233342211133321111121111111221211111111-24111111111111322-271C14221---1111-62-2-171-1-111-11-1111111-1-12122-588427411212423422233F3335421132223253344 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 400 STR:RPRED 88.7 SQ:SECSTR #####HHHHHHHHHHHHHHHcHHHHHHHHHHHTTccccEEEcHHHHTTccEEEEEEEGGGcTTccTHHHHHHHHHHHHHHTTccEEEEEEcccHHHHHHHHHHHHTTcEEEEEEEHHHHTTHHHHHHHTTcEEEEEccTTccHHHHHHHHHHHHHHHTTTccccTTHHHHHHTTTHHHHHHHHHHHHHHcccccEEEEEccccHHHHGGGTTcTTcEEEEEEEEEETTEEEEEcccccccccccccccGGGccccccHHHHHHHHTTcEEEEEHHHHHHHHHTTHHHTTcEcEEEEEEHHHHHHHHHHHHHHHcccTHHHHHHHHHHHHHccTTccEEEEEEEcccGGGHHHHHHHcHTccTTcccTTcccccccccHHHHHHHHHHHccHcTTEEEEEEEEccc############################################## DISOP:02AL 451-452| PSIPRED ccccHHHHcccHHHcccccHHHHHHHHHHHHHHcccccEEEcccccHHHccEEEEEEccccccccHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHcccEEccccccccHHccccHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHcccEEEcccccccEEcccccccccccHHHHHHcccccccccHHHHHHHHHHccccccEEEEEEcHHHHHHHHHHHHHHcccEEccHHHHHHHHHHHHccccccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEEEcccccHHHHHHHHHHcccccEEEEEEEEEcccccEEEEEEEEEccHHHHHHHHHHHHHccccEEEcccccHHHHHHc //