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Nocardia farcinica IFM 10152 (nfar0)
Gene : kasA
DDBJ      :kasA         putative 3-oxoacyl-ACP synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  867/915 : Eukaryota  185/199 : Viruses  0/175   --->[See Alignment]
c.95.1
:416 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->415 2wgeA PDBj e-164 67.7 %
:RPS:PDB   14->415 2byzA PDBj 3e-77 31.9 %
:RPS:SCOP  14->218 1tqyB1  c.95.1.1 * 4e-31 18.3 %
:RPS:SCOP  222->415 1tqyB2  c.95.1.1 * 9e-59 33.0 %
:HMM:SCOP  11->259 1e5mA1 c.95.1.1 * 2.9e-59 36.8 %
:HMM:SCOP  221->416 1tqyA2 c.95.1.1 * 1e-61 49.0 %
:RPS:PFM   14->254 PF00109 * ketoacyl-synt 2e-12 32.0 %
:RPS:PFM   267->374 PF02801 * Ketoacyl-synt_C 1e-13 40.7 %
:HMM:PFM   13->253 PF00109 * ketoacyl-synt 2.9e-45 29.3 232/253  
:HMM:PFM   263->374 PF02801 * Ketoacyl-synt_C 5.8e-33 38.4 112/119  
:BLT:SWISS 1->415 FAB1_MYCLE e-165 67.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56463.1 GT:GENE kasA GT:PRODUCT putative 3-oxoacyl-ACP synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1768806..1770056 GB:FROM 1768806 GB:TO 1770056 GB:DIRECTION + GB:GENE kasA GB:PRODUCT putative 3-oxoacyl-ACP synthase GB:PROTEIN_ID BAD56463.1 LENGTH 416 SQ:AASEQ MTTPSTLNGNFPNVVVTSMAATTSIAGDVDATWKGLLNGESGIDVLEDSFIEEYDLPVRIGGHLKVNPDTLLSRVEIRRMAYVERLATVLGREVWKNAGSPEVDPDRLAVAIGTGLGGGDALIDSVDKLKNGGYRKISPLAVQMVMPNGPSACVGLELKARAGVVTPVSACSSGSEAIANAWRMIVMGDADVVVTGGVEGYIDSVPIAAFSMMRAMSTRNDDPKGASRPFDKDRDGFVFGEAGALMVLETEEHAKARGATIHARLLGAGITSDGYHLVAPDPEGTGAARAMTRAMQSAGLTKQDITHINAHATATPIGDTAEANAINKAVGNHPSVYAPKSALGHSIGAVGALESVLTVLSIRDGIVPPTLNLDNQDPEIDLDVVKGEARRQEIEYAINNSFGFGGHNVALAFGRA GT:EXON 1|1-416:0| BL:SWS:NREP 1 BL:SWS:REP 1->415|FAB1_MYCLE|e-165|67.5|415/416| BL:PDB:NREP 1 BL:PDB:REP 4->415|2wgeA|e-164|67.7|412/415| RP:PDB:NREP 1 RP:PDB:REP 14->415|2byzA|3e-77|31.9|392/405| RP:PFM:NREP 2 RP:PFM:REP 14->254|PF00109|2e-12|32.0|231/245|ketoacyl-synt| RP:PFM:REP 267->374|PF02801|1e-13|40.7|108/118|Ketoacyl-synt_C| HM:PFM:NREP 2 HM:PFM:REP 13->253|PF00109|2.9e-45|29.3|232/253|ketoacyl-synt| HM:PFM:REP 263->374|PF02801|5.8e-33|38.4|112/119|Ketoacyl-synt_C| RP:SCP:NREP 2 RP:SCP:REP 14->218|1tqyB1|4e-31|18.3|202/208|c.95.1.1| RP:SCP:REP 222->415|1tqyB2|9e-59|33.0|191/194|c.95.1.1| HM:SCP:REP 11->259|1e5mA1|2.9e-59|36.8|247/250|c.95.1.1|1/1|Thiolase-like| HM:SCP:REP 221->416|1tqyA2|1e-61|49.0|196/205|c.95.1.1|1/1|Thiolase-like| OP:NHOMO 4117 OP:NHOMOORG 1052 OP:PATTERN -------------------------------------------------------------------- 2371L2333331-1EDDKK-KDCCS9KJKKKEEDCD74572PFO1111121123211411NI21U5SXHU31111111-1112111111114111111-257552J66241111111111111111111211111122255111I346456691111222211322ECBV51111111111111111111121L1111111121111111211471121114111111111A3111111111111111111112-111111-1-11111111111111122211111241111111111111111111111111111111111111431111111111L1551111112--1211211311111111111111318222233333754333344633333333333333-4464654447425668446555554853253433333441111111113322213111111111111111111111111111111211112221453342GE98A73345EEEE2J564222312568123324336732332223311122221223225143251243142221353532B463313ZN331321111111111111111111111334432275334466666566666666666661-22221111111B293243255A288322-522222323353522222433483B9422222222222222225223222221746566545565112434333766742B4611113111111133111441132214A44357D66352622879411111111234471222224654443333333322222212--1111--------1-1-------------------------1111111111192 1152cn3-311-1127CE8PFHMLfPS222444KJ76CAC5AB344HEEMFCD998PNE878111111-1111111112111111111-122C112------3111-162M34243-2121122412214A2-2231111222411212-31142422122226513547A54872345*63559845AH473351223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 416 STR:RPRED 100.0 SQ:SECSTR cccccccccccccEEEEEEEEEcTTcccHHHHHHHHHHTcccEEEcccEEcHHHHccccEEEccccccTTcccHHHHTTccHHHHHHHHHHHHHHHHHTccHTTcTTEEEEEEcccccHHHHHHHHHHHTccTHHHHcccHHHHHcTTHHHHHHHTTTTccccEEccccGGGHHHHHHHHHHHHHHTTcccEEEEEEEEcccHHHHHHHHTTTccccccTTcGGGTccTTcTTccccccccEEEEEEEEEHHHHHHTTccccEEEEEEEEEEccccccccccHcHHHHHHHHHHTTTcccccccccEEEccccccHHHHHHHHHHHHHHHTTccEEEcTHHHHcccGGGHHHHHHHHHHHHHHHTEEccccccccccGGGcccccccccEEccccEEEEEEEETTTEEEEEEEEcc DISOP:02AL 1-10| PSIPRED cccccccccccccEEEEEEEEEccccccHHHHHHHHHccccccccccccccccccccEEEEEEEcccHHHcccHHHHHHccHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHccccccccccccccccccccccccEEEEccEEEEEEEcHHHHHHccccEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccHHHccEEEEccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEccccccEEEEEEEEcc //