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Nocardia farcinica IFM 10152 (nfar0)
Gene : katA
DDBJ      :katA         putative manganese-containing catalase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  173/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.25.1
:303 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->269 1jkuA PDBj 2e-57 43.5 %
:RPS:PDB   1->272 2cwlA PDBj 6e-29 27.7 %
:RPS:SCOP  1->270 1jkuA  a.25.1.3 * 5e-86 43.3 %
:HMM:SCOP  1->286 2cwlA1 a.25.1.3 * 4e-98 46.9 %
:RPS:PFM   1->252 PF05067 * Mn_catalase 1e-55 47.5 %
:HMM:PFM   1->253 PF05067 * Mn_catalase 1.2e-94 52.0 250/281  
:BLT:SWISS 1->266 YJQC_BACSU 1e-77 54.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56027.1 GT:GENE katA GT:PRODUCT putative manganese-containing catalase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1310835..1311746 GB:FROM 1310835 GB:TO 1311746 GB:DIRECTION + GB:GENE katA GB:PRODUCT putative manganese-containing catalase GB:PROTEIN_ID BAD56027.1 LENGTH 303 SQ:AASEQ MFRHTDYLQFDVKPEKPDPVYARKLQELIGGAFGEMTVTMQYLFQGWNCRMPGKYKDMIMDVATEEIGHVEMIATMVARLLEGAPATRATQEAAADPVVAAVLGGMDPQQAIVSGGGPTLSDANGVPWNGRYIVASGNLLADFRANVTAESQGRIQTARLYNMTDDPGVKNMLEFNLARDTYHQNLWLAAIEQLKEDGLEGTVTPDALFDEEYSEHATSLWHLSDGTQSDQGRWAGGVAPDGVHQNGFLADPQPLGDKASAPPPDPELYATYDGSQGEPRSAAFGTEAGLMGKVKDALDPNKP GT:EXON 1|1-303:0| BL:SWS:NREP 1 BL:SWS:REP 1->266|YJQC_BACSU|1e-77|54.8|263/278| SEG 84->95|apatratqeaaa| BL:PDB:NREP 1 BL:PDB:REP 1->269|1jkuA|2e-57|43.5|262/266| RP:PDB:NREP 1 RP:PDB:REP 1->272|2cwlA|6e-29|27.7|271/299| RP:PFM:NREP 1 RP:PFM:REP 1->252|PF05067|1e-55|47.5|242/259|Mn_catalase| HM:PFM:NREP 1 HM:PFM:REP 1->253|PF05067|1.2e-94|52.0|250/281|Mn_catalase| RP:SCP:NREP 1 RP:SCP:REP 1->270|1jkuA|5e-86|43.3|263/266|a.25.1.3| HM:SCP:REP 1->286|2cwlA1|4e-98|46.9|286/0|a.25.1.3|1/1|Ferritin-like| OP:NHOMO 234 OP:NHOMOORG 177 OP:PATTERN ------------------111---------1------------------------------------- 111----------------------1----------1-------1----11-1---1---------1---1-----------1----------------------1-2-------------------------------------1--32----------------1222----------------11---112222221121222122423322221-22121-------11---------------------------------------2---------------------------------------------------21121111111312-3221--1-11---1-1-11111-1112111------1---------12111-------1------------222211221-------11--1-2----------1-------------------1----------------------------------------1-1111-2----22111111---2111----------------------1------------------------------------------------------------------------------------------------------------------------1---1--11--------1--------11--------11------1111111111111111-----------------------------------------------------------------1-1--1-11--------11------------------------1-11111------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 271 STR:RPRED 89.4 SQ:SECSTR ccccccccccccccccccHHHHHHHGGGTTcTTcHHHHHHHHHHHHHHcccTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTccccccccGGcTTGGGGcccccHHHHTcccccccccTTcccccGGGccccccHHHHHHHHHHHHHHHHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccGGGGcccccccGGHHTTTTTEEEEccccccTTGGGTcccccTTT#ccccEEEEccccccccccccccGGGTccc############################### DISOP:02AL 273-283, 300-303| PSIPRED ccEEccEEEEEcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHcccccHHHHHHcccccccccccccEEHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHccHHHHHHHcccccccccHHHccccccccccccccEEEccccccccccccccccHHcccccHHHccHHHHccccccccHHHHHHHHccccc //