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Nocardia farcinica IFM 10152 (nfar0)
Gene : kdpB
DDBJ      :kdpB         putative potassium transporter B subunit
Swiss-Prot:             

Homologs  Archaea  58/68 : Bacteria  821/915 : Eukaryota  195/199 : Viruses  0/175   --->[See Alignment]
b.82.7c.108.1d.220.1f.33.1
:684 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   112->206 2hc8A PDBj 2e-13 42.4 %
:BLT:PDB   283->570 3a1eB PDBj 5e-15 26.3 %
:RPS:PDB   112->212,274->582 3b8cA PDBj 5e-42 21.8 %
:RPS:SCOP  105->203 1iwoA1  b.82.7.1 * 4e-18 23.2 %
:RPS:SCOP  312->451 1svjA  d.220.1.1 * 7e-34 36.3 %
:RPS:SCOP  446->611 1iwoA4  f.33.1.1 * 2e-28 10.8 %
:HMM:SCOP  102->203 1su4A1 b.82.7.1 * 7.7e-24 38.2 %
:HMM:SCOP  288->562 1nnlA_ c.108.1.4 * 3.7e-39 35.6 %
:RPS:PFM   74->212 PF00122 * E1-E2_ATPase 2e-10 37.7 %
:RPS:PFM   446->530 PF00702 * Hydrolase 1e-10 40.0 %
:HMM:PFM   72->293 PF00122 * E1-E2_ATPase 2.2e-39 31.1 222/228  
:HMM:PFM   297->531 PF00702 * Hydrolase 2.4e-27 28.7 181/192  
:HMM:PFM   514->550 PF08282 * Hydrolase_3 1.4e-06 40.5 37/254  
:BLT:SWISS 16->684 ATKB_STRCO 0.0 64.9 %
:PROS 553->565|PS00018|EF_HAND_1
:PROS 303->309|PS00154|ATPASE_E1_E2
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56413.1 GT:GENE kdpB GT:PRODUCT putative potassium transporter B subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1717319..1719373 GB:FROM 1717319 GB:TO 1719373 GB:DIRECTION + GB:GENE kdpB GB:PRODUCT putative potassium transporter B subunit GB:PROTEIN_ID BAD56413.1 LENGTH 684 SQ:AASEQ MTTVLDRPQRAAHPAFAPRQLAGALPGALTKLDPRRMARNPVMFVVFVGSVITTLAAVAEPSVFGWSIAAWLWFTVLFANLAEAVAEGRGKAQAETLRRTKREMTARRLGGDGEERVPATDLRVGDRVVVEAGELIPGDGDVIDGIAAVDESAITGESAPVIRESGGDRCAVTGGTTVLSDRIVVRITAAPGQTFVDRMIALVEGAARQKTPNEIALNILLAALTVVFLLAVVALGPMSAYAGAERGPVELIALLVCLIPTTIGALLSAIGIAGMDRLVRRNVLATSGRAVEAAGDIDTLLLDKTGTVTFGNRRATALHPAPGVTASELAAAARLSSLADGTPEGRSIVDLCAADHGLPTLPSADEGRAEFVAFSAHTRMSGLDLDSARIRKGAADAVTAWVREQGGQLADAVTETVDRIARGGGTPLVVARADGVDAAVLGVVELSDVVKPGMAERFARLRTMGIRTVMVTGDNPLTARAIAAAAGVDDFLAEATPEDKLALIRTEQAAGRLVAMTGDGTNDAPALARADVGVAMNSGTSAAKEAGNMVDLDSDPTKLIEVVEIGKQLLITRGALTTFSLANDLAKYFAILPALFSGVYPQLAALNILGLATAQSAILSSVIFNALVIVALIPLALKGVRYRPASASALLGRNLLIYGVGGVITPFLGIPLIDLVVRHIPGIG GT:EXON 1|1-684:0| BL:SWS:NREP 1 BL:SWS:REP 16->684|ATKB_STRCO|0.0|64.9|666/707| PROS 553->565|PS00018|EF_HAND_1|PDOC00018| PROS 303->309|PS00154|ATPASE_E1_E2|PDOC00139| TM:NTM 7 TM:REGION 39->61| TM:REGION 66->88| TM:REGION 216->238| TM:REGION 254->276| TM:REGION 587->609| TM:REGION 617->639| TM:REGION 656->678| SEG 215->235|ialnillaaltvvfllavval| SEG 326->339|aselaaaarlssla| SEG 428->444|lvvaradgvdaavlgvv| SEG 479->495|araiaaaagvddflaea| SEG 626->637|alvivaliplal| BL:PDB:NREP 2 BL:PDB:REP 112->206|2hc8A|2e-13|42.4|92/113| BL:PDB:REP 283->570|3a1eB|5e-15|26.3|266/272| RP:PDB:NREP 1 RP:PDB:REP 112->212,274->582|3b8cA|5e-42|21.8|406/833| RP:PFM:NREP 2 RP:PFM:REP 74->212|PF00122|2e-10|37.7|138/236|E1-E2_ATPase| RP:PFM:REP 446->530|PF00702|1e-10|40.0|85/195|Hydrolase| HM:PFM:NREP 3 HM:PFM:REP 72->293|PF00122|2.2e-39|31.1|222/228|E1-E2_ATPase| HM:PFM:REP 297->531|PF00702|2.4e-27|28.7|181/192|Hydrolase| HM:PFM:REP 514->550|PF08282|1.4e-06|40.5|37/254|Hydrolase_3| GO:PFM:NREP 6 GO:PFM GO:0005524|"GO:ATP binding"|PF00122|IPR008250| GO:PFM GO:0006754|"GO:ATP biosynthetic process"|PF00122|IPR008250| GO:PFM GO:0016020|"GO:membrane"|PF00122|IPR008250| GO:PFM GO:0016820|"GO:hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances"|PF00122|IPR008250| GO:PFM GO:0003824|"GO:catalytic activity"|PF00702|IPR005834| GO:PFM GO:0008152|"GO:metabolic process"|PF00702|IPR005834| RP:SCP:NREP 3 RP:SCP:REP 105->203|1iwoA1|4e-18|23.2|99/115|b.82.7.1| RP:SCP:REP 312->451|1svjA|7e-34|36.3|135/136|d.220.1.1| RP:SCP:REP 446->611|1iwoA4|2e-28|10.8|166/472|f.33.1.1| HM:SCP:REP 102->203|1su4A1|7.7e-24|38.2|102/0|b.82.7.1|1/1|Calcium ATPase, transduction domain A| HM:SCP:REP 288->562|1nnlA_|3.7e-39|35.6|194/0|c.108.1.4|1/1|HAD-like| OP:NHOMO 5886 OP:NHOMOORG 1074 OP:PATTERN 112-1-11121112-131111112A44223654451-3433315745734668-11--1213322--- 4233122866842452399-9J33D6999997H8AC685722254626622185C346--44733274653333335533843234364534-412---4252324534311111111-1111124234331231245565111564C9A67844331111116934GD93-11----1--1-27344211434666665865667666644444667463544585565544433252222333323143339984986386999338876445455853332224442222222222233333333343333333333334256496668797777588855646445344334856454441375633325326339-----6754C9387585522231333338-5A42C778857-5446437722585D13291565561223333333363112324------------------------------2524143333433333344444444555536686476924BB3554CB7B4752A5D354364222222238564932642344442555153554545646546864312-11-11--1-111111122-248B345253133152322234242262222722---4538------44332533333334433-3433333324333333333677333324343444444434333433222231-444444444444---31111-456792422111111-11111-11322332213264778A67565466665652121-11-16333322222333334311211111----1123541122--------316131-1-211-111111-121111111141113111347 2322758-9222ABH69AAFEECGDGE887757CBBA868788899A7DFFGJIBDCBA9BB745454-5434465423435544555-5C5966B6465685EDH-A8A9NQDQKJC99BAECVWBTDz*U3bJm5B9AH8BJE5CA96J56ZDJA9H4FhK6594O89V8G752E85*976A8LEHcDNI7AFPBCA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 542 STR:RPRED 79.2 SQ:SECSTR ##############################################################################HHHHHHHHcccccccHHHHHTcccEEEEEcTTccccccccTTTTcTTccccccccccccccccccccccccccccTTcccccccccccccccTcccccccccccccccccccTTTTTcTTccccccccccccTTHHHHHHHHHHHHHHHHHHHHHHHHccGGGccGGGTTcccTTHHHHHHcTTHHHHHHHHHHHHHHHHTTTccccccGGGHHHHTTccccEEEcccccccccccccccccccccccTTHHHHHHHHHHHccccccccHHHHHHHTTccTTcccccccccccccccTTTccccccccccccccccGGGTccccccccETTTTTHHHHHHHHTTTTcEcccccccccccccccEEEEEcccccHHHHHHHHHHHHTTcccEEEEcccHHHHTHHHHTTTcTTcccTTcHHHHHHHHHHHHHTTccccccccccTTHHHHHHccccccccccHHHHGGGcccccccccHHHHTHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccccccHHHHTTTTTGHHHHHH################################################################ DISOP:02AL 6-7, 88-99, 202-215| PSIPRED cccHHccccccccHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEEHHHcccccEEEEccccEEEEcEEEEEcccEEHHHHHccccccEEccccccccEEEEcEEEEEEEEEEEEEEEccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcHHHHHHHHcccEEEEccEEEEEcccEEEEEEEEcccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHccccHHHHHHcccccccccccEEEEEEEccccEEEEEHHHHHHHHHHHHccccccHHHHHHHHHHHHccccEEEEEEEcccccEEEEEEEEcccccccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccHHEEccccHHHHHHHHHHHHHcccEEEEEccccccHHHHHHccccEEEcHHHHHHHHHccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //