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Nocardia farcinica IFM 10152 (nfar0)
Gene : kdpE
DDBJ      :kdpE         putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  14/68 : Bacteria  850/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:226 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->225 2oqrA PDBj 4e-32 31.2 %
:RPS:PDB   1->222 3c3wB PDBj 1e-23 21.7 %
:RPS:SCOP  3->109 1p2fA2  c.23.1.1 * 2e-22 33.7 %
:RPS:SCOP  129->226 1oddA  a.4.6.1 * 7e-22 28.6 %
:HMM:SCOP  1->190 1s8nA_ c.23.1.1 * 1.2e-42 36.4 %
:RPS:PFM   4->109 PF00072 * Response_reg 3e-15 41.5 %
:RPS:PFM   148->223 PF00486 * Trans_reg_C 2e-10 38.2 %
:HMM:PFM   4->112 PF00072 * Response_reg 1.1e-29 39.4 109/112  
:HMM:PFM   148->224 PF00486 * Trans_reg_C 4.2e-23 37.7 77/77  
:BLT:SWISS 1->224 KDPE_ECOLI 3e-44 41.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56416.1 GT:GENE kdpE GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1722514..1723194 GB:FROM 1722514 GB:TO 1723194 GB:DIRECTION + GB:GENE kdpE GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD56416.1 LENGTH 226 SQ:AASEQ MTRILVVDDEPQILRALRINLTARGYEVVTAADGRSALRAAAQQRPDVIVLDLGLPDLDGIEVLAGLHGWCSAPVIVLSARSDAADKVAALDTGADDYVTKPFGMEEFLARIRAAVRRAAATPDLPEPTVVTDAFVVDLAAKKVTRDGADVHLTPTEWSMLEMLVRHRGKLVGQRELLTEIWGPSYVGQTHYLRVYLTQLRHKLEPDPSRPRYLITEPGRGYRFEP GT:EXON 1|1-226:0| BL:SWS:NREP 1 BL:SWS:REP 1->224|KDPE_ECOLI|3e-44|41.3|223/225| SEG 31->42|aadgrsalraaa| SEG 110->121|ariraavrraaa| BL:PDB:NREP 1 BL:PDB:REP 2->225|2oqrA|4e-32|31.2|224/226| RP:PDB:NREP 1 RP:PDB:REP 1->222|3c3wB|1e-23|21.7|203/210| RP:PFM:NREP 2 RP:PFM:REP 4->109|PF00072|3e-15|41.5|106/111|Response_reg| RP:PFM:REP 148->223|PF00486|2e-10|38.2|76/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 4->112|PF00072|1.1e-29|39.4|109/112|Response_reg| HM:PFM:REP 148->224|PF00486|4.2e-23|37.7|77/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 3->109|1p2fA2|2e-22|33.7|104/120|c.23.1.1| RP:SCP:REP 129->226|1oddA|7e-22|28.6|98/100|a.4.6.1| HM:SCP:REP 1->190|1s8nA_|1.2e-42|36.4|187/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 10221 OP:NHOMOORG 880 OP:PATTERN -----------------------1-----------1--11111-1--314112--------------- 8EI7N466778645BAA99-9E448A999997GEFFAEFEBFFFA8676897ADE45711JHK5O6INNP6333354457IB71346689B6-922---42C254J3E8C1-------------122232223282QPPQQH8DU6dOVQNOAFGDF677999JFFFedkE584555574544CE687451A6GTTUTURTUHUSWWUQFHDBACTVb9BDV8EDA99A9AdY7AA9A99899AAA9968996A675CC655466677AB655674686CDC766878877777787777555556666665576554465665RKLcQQQUUVWSRLEaWWADFAQKD79CFO94bVKBA435647685227GD6HEEC55666GDNMLD8CFLGHMAA9AAAAA99C-GGGGFKGJ9KA1OIIMIFINMJIGFM7B9CAEGEFF9CADDDDDDDD9BA9AGEC1122211111112333323222222212226BF56CEDAHQTVTZQKIIIEQQOSKIKJCJVRPJMNT13JNLJEKDBUJIKM5EMHACABB62211111973FKP9JM957E47DB7771MELGFBMBAHHHIJR9DC74855555432223222229E69B88HF8DFFK7EDAIDJJH9HFHHHJIIGHKJI--35A58------CBCECEBFEEGFGGHEF-EHGEFFFEFGEFFFFFFFCJFIBD999ECEEEEEEDEEDEDEEHDCCDDEF91EDDDDDDDDDDD--2B3333333339CSCJ433223233333115CBABD8A88AH8SQSSPXXaHSTVRHQPS3212132223BDFNDDDDDFIKIJNPEDGDECCD6656--F24444551-------3-2-------------------------38334575454G3 -----1--------1--------------------------------------------------------------------------------------1------2-------------------------------------------------2----2-1-------2-111-------2--C---119---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 226 STR:RPRED 100.0 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHcHHHHHHHEHHHGGGccHHHHHHHHHHHHHHccTTTTccHHHHHHHHHHTTTccHHHcHHHHcHHHHHHHHTccHHHHHHHHHHHHHHTTccccccHHHHHHHHHTcEEcc DISOP:02AL 119-129| PSIPRED ccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEHHHHHHHHHHccccccccEEEEEEccEEEEcc //