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Nocardia farcinica IFM 10152 (nfar0)
Gene : lepA
DDBJ      :lepA         putative GTP-binding elongation factor
Swiss-Prot:LEPA_NOCFA   RecName: Full=GTP-binding protein lepA;

Homologs  Archaea  67/68 : Bacteria  912/915 : Eukaryota  198/199 : Viruses  0/175   --->[See Alignment]
a.71.1b.43.3c.37.1d.58.11
:616 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->556 3degC PDBj e-145 52.8 %
:RPS:PDB   28->566 3cb4D PDBj 1e-87 44.2 %
:RPS:SCOP  10->187 1n0uA2  c.37.1.8 * 5e-36 31.9 %
:RPS:SCOP  227->290 1zunB1  b.43.3.1 * 1e-06 16.9 %
:RPS:SCOP  302->381 1fnmA4  d.58.11.1 * 2e-13 26.0 %
:RPS:SCOP  411->532 1n0uA5  d.58.11.1 * 8e-27 19.5 %
:RPS:SCOP  503->601 1g7dA  a.71.1.1 * 8e-19 15.1 %
:HMM:SCOP  11->217 1f60A3 c.37.1.8 * 2.4e-65 42.4 %
:HMM:SCOP  176->299 2bv3A1 b.43.3.1 * 1.8e-30 35.0 %
:HMM:SCOP  301->381 1wdtA5 d.58.11.1 * 5.3e-20 36.4 %
:HMM:SCOP  408->505 1wdtA4 d.58.11.1 * 3.1e-23 41.7 %
:RPS:PFM   16->145 PF00009 * GTP_EFTU 3e-30 47.6 %
:RPS:PFM   408->485 PF00679 * EFG_C 4e-11 37.7 %
:RPS:PFM   498->606 PF06421 * LepA_C 2e-44 73.4 %
:HMM:PFM   499->605 PF06421 * LepA_C 5.3e-53 71.0 107/109  
:HMM:PFM   15->192 PF00009 * GTP_EFTU 2.1e-51 41.5 176/189  
:HMM:PFM   409->495 PF00679 * EFG_C 3.5e-23 31.4 86/89  
:HMM:PFM   216->286 PF03144 * GTP_EFTU_D2 3.1e-08 21.1 71/74  
:BLT:SWISS 1->616 LEPA_NOCFA 0.0 100.0 %
:PROS 54->69|PS00301|EFACTOR_GTP
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56244.1 GT:GENE lepA GT:PRODUCT putative GTP-binding elongation factor GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 1570775..1572625 GB:FROM 1570775 GB:TO 1572625 GB:DIRECTION + GB:GENE lepA GB:PRODUCT putative GTP-binding elongation factor GB:PROTEIN_ID BAD56244.1 LENGTH 616 SQ:AASEQ MPASFADTTFTDPSRIRNFCIIAHIDHGKSTLADRMLQLTGVVEERAMRAQYLDRMDIERERGITIKAQNVRLPWRVDDTDYVMHLIDTPGHVDFTYEVSRALEACEGAILLVDAAQGIEAQTLANLYLALDKDLTIIPVLNKIDLPAADPDRYAAELAHIVGCEPSDVLRVSGKTGVGVPELLDEVIRQVPPPVGDADAPARAMIFDSVYDTYRGVVTYVRVVDGKLTPREKIKMMSTGATHELLEIGIVSPEPKPTDGLGVGEVGYLITGVKDVRQSKVGDTVTAARNGAAEPLTGYREPRPMVYSGLYPVDGSDYPDLRDALEKLQLNDAALSYTPETSVALGFGFRCGFLGLLHMEITRERLQREFDLDLISTAPNVVYRVEMEDGTEHVVTNPSYWPEGKVRKVFEPVVKCTIISPSEFIGSIMELCQSRRGELGGMDYLSETRVELRYTLPMAEIIFDFFDSLKSRTRGYASLDYEESGEQESQLVKVDILLQGEAVDAFSAIVHKDAAQAYGHKMTTKLRELIPRQQFEVPIQAAIGSKIIARENIRAIRKDVLAKCYGGDISRKRKLLEKQKEGKKRMKTIGRVDVPQEAFVAALSSDAQADKPKDKK GT:EXON 1|1-616:0| SW:ID LEPA_NOCFA SW:DE RecName: Full=GTP-binding protein lepA; SW:GN Name=lepA; OrderedLocusNames=NFA_13990; SW:KW Complete proteome; GTP-binding; Nucleotide-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->616|LEPA_NOCFA|0.0|100.0|616/616| GO:SWS:NREP 2 GO:SWS GO:0005525|"GO:GTP binding"|GTP-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| PROS 54->69|PS00301|EFACTOR_GTP|PDOC00273| SEG 191->204|vpppvgdadapara| SEG 210->226|vydtyrgvvtyvrvvdg| SEG 345->357|lgfgfrcgflgll| BL:PDB:NREP 1 BL:PDB:REP 16->556|3degC|e-145|52.8|540/545| RP:PDB:NREP 1 RP:PDB:REP 28->566|3cb4D|1e-87|44.2|520/525| RP:PFM:NREP 3 RP:PFM:REP 16->145|PF00009|3e-30|47.6|126/183|GTP_EFTU| RP:PFM:REP 408->485|PF00679|4e-11|37.7|77/88|EFG_C| RP:PFM:REP 498->606|PF06421|2e-44|73.4|109/109|LepA_C| HM:PFM:NREP 4 HM:PFM:REP 499->605|PF06421|5.3e-53|71.0|107/109|LepA_C| HM:PFM:REP 15->192|PF00009|2.1e-51|41.5|176/189|GTP_EFTU| HM:PFM:REP 409->495|PF00679|3.5e-23|31.4|86/89|EFG_C| HM:PFM:REP 216->286|PF03144|3.1e-08|21.1|71/74|GTP_EFTU_D2| GO:PFM:NREP 3 GO:PFM GO:0003924|"GO:GTPase activity"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00009|IPR000795| GO:PFM GO:0005525|"GO:GTP binding"|PF00679|IPR000640| RP:SCP:NREP 5 RP:SCP:REP 10->187|1n0uA2|5e-36|31.9|166/323|c.37.1.8| RP:SCP:REP 227->290|1zunB1|1e-06|16.9|59/92|b.43.3.1| RP:SCP:REP 302->381|1fnmA4|2e-13|26.0|77/79|d.58.11.1| RP:SCP:REP 411->532|1n0uA5|8e-27|19.5|113/114|d.58.11.1| RP:SCP:REP 503->601|1g7dA|8e-19|15.1|93/106|a.71.1.1| HM:SCP:REP 11->217|1f60A3|2.4e-65|42.4|203/239|c.37.1.8|1/1|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 176->299|2bv3A1|1.8e-30|35.0|120/0|b.43.3.1|1/1|Translation proteins| HM:SCP:REP 301->381|1wdtA5|5.3e-20|36.4|77/0|d.58.11.1|1/1|EF-G C-terminal domain-like| HM:SCP:REP 408->505|1wdtA4|3.1e-23|41.7|96/0|d.58.11.1|1/1|EF-G C-terminal domain-like|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g8D979I99TE79B98CA*BAA9CTJWW7MHEDAA76A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 599 STR:RPRED 97.2 SQ:SECSTR #####cTTccccGGTEEEEEEEcccccEEEEEEcccccHccccccccccccccHHHHHHHTTccEEEEEEEcTTccTTccEEEEEEEEccccGGGHHHHHHHHHHccEEEEEEETTTcccTHHHHHHHHHHHTTcEEEEEEEcTTcTTccHHHHHHHHHHHTccccTTcEEEcTTTcTTHHHHHHHHHHHcccccccTTcccEEEEEEEEEETTTEEEEEEEEEEccEEcccEEEETTTccEEEccEEEEEcccEEEccEEcTTcEEEEEcccccGGGccTTcEEEEcccccccccTTcccccccEEEEEEEccGGGHHHHHHHHHHHHTTccccEEEEEEETTTEEEEEEEEccHHHHHHHHHHHHHTccccEEEcccEEcEEEEEccccEEEEccGGGcccGGEEEEEEEEEEEEEEEEGGGHHHHHHHHHHTTcEEEEEEccTTEEEEEEEEEEHHHHHTTTHHHHHHHTTcccEEEEEEEEEEEccEEEEEEEETTEEEEEEEEEEEGGGHHHHHHHHHHHHHHHcccccccEEEEEEETTEEEEEEEEccccTTcccccccHHHTTTcEEEEEEEcTTcccEEEEEEEEEGGGcccccc############ DISOP:02AL 1-10, 314-321, 395-404, 577-586, 604-616| PSIPRED cccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHccEEccccHHHHcccHHHHHHcccEEEEEEEEEEEEEccccEEEEEEEccccHHHHHHHHHHHHHccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHcccccccEEccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHcccccEEEEEEEEEcEEccccEEEEEEcccEEEEEEEEEEccccccccEEccccEEEEEEEcccccccccccEEEEccccccccccccccccEEEEEEEEccccHHHHHHHHHHHHHHHcccEEEEEEcccHHHHccEEEEEcccHHHHHHHHHHHHHHcccEEEcccEEEEEEEEEccEEEEEEccccccccccEEEEEEEEEEEEEEccccccHHHHHHHccccEEEEEEEEcccEEEEEEEccccccHHHHHHHHHHccccEEEEEEEEcccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEccEEEEEccccHHHcccEEEEEccccHHHHHHHHHHHHHHHHHHHcccEEccHHHHHHHHccccccccccccc //