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Nocardia farcinica IFM 10152 (nfar0)
Gene : lipA
DDBJ      :lipA         putative lipoic acid synthetase
Swiss-Prot:LIPA_NOCFA   RecName: Full=Lipoyl synthase;         EC=2.8.1.8;AltName: Full=Lipoic acid synthase;AltName: Full=Lipoate synthase;AltName: Full=Sulfur insertion protein lipA;AltName: Full=Lip-syn;         Short=LS;

Homologs  Archaea  20/68 : Bacteria  701/915 : Eukaryota  186/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:352 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   97->244 1r30B PDBj 4e-06 25.7 %
:RPS:PDB   38->315 3ciwA PDBj 1e-29 12.0 %
:RPS:SCOP  97->282 1r30A  c.1.28.1 * 2e-24 25.1 %
:HMM:SCOP  50->329 1r30A_ c.1.28.1 * 8.7e-68 34.5 %
:RPS:PFM   97->244 PF04055 * Radical_SAM 8e-05 28.5 %
:HMM:PFM   96->251 PF04055 * Radical_SAM 3.9e-15 22.4 152/166  
:BLT:SWISS 1->352 LIPA_NOCFA 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56532.1 GT:GENE lipA GT:PRODUCT putative lipoic acid synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1838121..1839179) GB:FROM 1838121 GB:TO 1839179 GB:DIRECTION - GB:GENE lipA GB:PRODUCT putative lipoic acid synthetase GB:PROTEIN_ID BAD56532.1 LENGTH 352 SQ:AASEQ MTSVDTPTPHGGTPAPAPATANGRKLLRIEARNAQTPIERKPKWIRTRATMGPEYSELKGLVKREGLHTVCEEAGCPNIFECWEDREATFLIGGEQCTRRCDFCQIDTGKPAALDRDEPRRVAESVQAMGLRYSTITGVARDDLEDGGAWLYAETVRAIKRLNPATGVELLIPDFNADPDQLAEVFSARPEVLAHNLETVPRIFKRIRPAFRYERSLSVLTAAREAGLVTKSNLILGMGETPEEVTEAMRDLHEAGCDILTITQYLRPSPRHHPVDRWVKPEEFVEHSRVAEEIGFAGVMAGPLVRSSYRAGRLYAQAMAHHGREIPPAMAHLAEEGTASQEASAVLARFGS GT:EXON 1|1-352:0| SW:ID LIPA_NOCFA SW:DE RecName: Full=Lipoyl synthase; EC=2.8.1.8;AltName: Full=Lipoic acid synthase;AltName: Full=Lipoate synthase;AltName: Full=Sulfur insertion protein lipA;AltName: Full=Lip-syn; Short=LS; SW:GN Name=lipA; OrderedLocusNames=NFA_16860; SW:KW 4Fe-4S; Complete proteome; Cytoplasm; Iron; Iron-sulfur;Metal-binding; S-adenosyl-L-methionine; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->352|LIPA_NOCFA|0.0|100.0|352/352| GO:SWS:NREP 5 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 6->21|tptphggtpapapata| BL:PDB:NREP 1 BL:PDB:REP 97->244|1r30B|4e-06|25.7|144/313| RP:PDB:NREP 1 RP:PDB:REP 38->315|3ciwA|1e-29|12.0|274/344| RP:PFM:NREP 1 RP:PFM:REP 97->244|PF04055|8e-05|28.5|144/164|Radical_SAM| HM:PFM:NREP 1 HM:PFM:REP 96->251|PF04055|3.9e-15|22.4|152/166|Radical_SAM| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| RP:SCP:NREP 1 RP:SCP:REP 97->282|1r30A|2e-24|25.1|167/314|c.1.28.1| HM:SCP:REP 50->329|1r30A_|8.7e-68|34.5|275/312|c.1.28.1|1/1|Radical SAM enzymes| OP:NHOMO 1077 OP:NHOMOORG 907 OP:PATTERN 11-----11111111---111---1111--11-----------------------------1------ 1121111111111111111-111111111111211111221112111111112221111111111111111-----------11-1111111-111-111111111111111111111111111111111111111111-1---21222222232222222222222222222222222222211122--11111111111111111111111111111111111------1111111111111111111111----------------------------------------------------------------------11---------------11--------11-------1-----111111--111111111111112111111111111111111111-11211111111111111121111111111111111111111111111111111111111111111111111111111111111111111111111222222111112222111111222111111111121111111111111111111111111111111--1-1--11-2121-111111112112111-11---------------------111111111111111111111111111111111111-1111111111111111111111111111-11211111111111111111111111111111111111111111111111111111111111111--11111111111111111111111111111112222212111111111111111211111111111111111111111111111111111111111111111-111111--------1-------------------------------------112 11----1-311-1111111-111111111111111111111111111111111111111111111111-1111111111111111111-12111111111111112-1312121111111111121121382-31311111-12-1111111111211112111211111A11212222R2222223351222211113 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 299 STR:RPRED 84.9 SQ:SECSTR #########################ccccHHHHTTccHHHHHHHHHTTcccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccEEEEEEEEEEcccccccTTcTTcTTccccccccccccccHHHHHHHHHHHHHTTccEEEEEEcccGGTTHHHHHHHHHHHTTTcEEEEEcccccHHHHHHHHHTTccEEEccccccHHHHHHHcTTccHHHHHHHHHHHHTTcEEEEccEEccTTccHHHHHHHHHHHHHHTccEEccEEccccTTcTTTTcccccHHHHHHHHHHHHHHcTTccccccHHHHHHcTTHHHEEEEcTTcc############################ DISOP:02AL 1-41, 320-337| PSIPRED cccccccccccccccccccccccccEEEEcccccccccccccHHHcccccccccHHHHHHHHHHcccEEEEEccccccHHHHHcccEEEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHHHHHcccccEEEEcccccccHHHHHHHHHccccEEEcccccHHHHHHHccccccHHHHHHHHHHHHHcccEEEccEEEcccccHHHHHHHHHHHHHcccEEEEEccccccccccccccccccHHHHHHHHHHHHHccHHHccccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHcc //