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Nocardia farcinica IFM 10152 (nfar0)
Gene : lipB
DDBJ      :lipB         putative lipoate-protein ligase
Swiss-Prot:LIPB_NOCFA   RecName: Full=Octanoyltransferase;         EC=2.3.1.181;AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase;AltName: Full=Lipoyl/octanoyl transferase;AltName: Full=Lipoate-protein ligase B;

Homologs  Archaea  4/68 : Bacteria  606/915 : Eukaryota  153/199 : Viruses  0/175   --->[See Alignment]
d.104.1
:250 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->225 1w66A PDBj 5e-71 61.5 %
:RPS:PDB   21->233 2artA PDBj 6e-35 16.8 %
:RPS:SCOP  8->225 1w66A1  d.104.1.3 * 2e-55 63.1 %
:HMM:SCOP  6->225 1w66A1 d.104.1.3 * 3.6e-65 47.7 %
:RPS:PFM   74->168 PF03099 * BPL_LplA_LipB 9e-08 36.4 %
:HMM:PFM   73->173 PF03099 * BPL_LplA_LipB 6e-16 30.5 95/125  
:HMM:PFM   170->225 PF02800 * Gp_dh_C 0.00048 35.2 54/157  
:BLT:SWISS 1->250 LIPB_NOCFA e-143 100.0 %
:PROS 82->97|PS01313|LIPB

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56533.1 GT:GENE lipB GT:PRODUCT putative lipoate-protein ligase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1839176..1839928) GB:FROM 1839176 GB:TO 1839928 GB:DIRECTION - GB:GENE lipB GB:PRODUCT putative lipoate-protein ligase GB:PROTEIN_ID BAD56533.1 LENGTH 250 SQ:AASEQ MNDTRTSRSARFDTTPVVVEDLGLIDYHAAWELQRTIAAERAEGAGSDRLLLLEHPSVYTAGRRTEDADLPIDGSPVVQVDRGGKITWHGPGQLVGYPIVRLAEPVDVVDYVRRLEEALISVCTELGLTVGRVEGRSGVWLPATETLAERKIAAIGIRVQRGVALHGISFNCNSALDGFQAIVPCGIQDAGVTTLTRELGREVTVAEVKPMVATAVVQALNGDLPVRDHDLPRPGTTPAAPNSTRVRSMT GT:EXON 1|1-250:0| SW:ID LIPB_NOCFA SW:DE RecName: Full=Octanoyltransferase; EC=2.3.1.181;AltName: Full=Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase;AltName: Full=Lipoyl/octanoyl transferase;AltName: Full=Lipoate-protein ligase B; SW:GN Name=lipB; OrderedLocusNames=NFA_16870; SW:KW Acyltransferase; Complete proteome; Cytoplasm; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->250|LIPB_NOCFA|e-143|100.0|250/250| GO:SWS:NREP 3 GO:SWS GO:0008415|"GO:acyltransferase activity"|Acyltransferase| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| PROS 82->97|PS01313|LIPB|PDOC01017| BL:PDB:NREP 1 BL:PDB:REP 9->225|1w66A|5e-71|61.5|213/218| RP:PDB:NREP 1 RP:PDB:REP 21->233|2artA|6e-35|16.8|202/247| RP:PFM:NREP 1 RP:PFM:REP 74->168|PF03099|9e-08|36.4|88/118|BPL_LplA_LipB| HM:PFM:NREP 2 HM:PFM:REP 73->173|PF03099|6e-16|30.5|95/125|BPL_LplA_LipB| HM:PFM:REP 170->225|PF02800|0.00048|35.2|54/157|Gp_dh_C| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF03099|IPR004143| GO:PFM GO:0006464|"GO:protein modification process"|PF03099|IPR004143| RP:SCP:NREP 1 RP:SCP:REP 8->225|1w66A1|2e-55|63.1|214/216|d.104.1.3| HM:SCP:REP 6->225|1w66A1|3.6e-65|47.7|216/0|d.104.1.3|1/1|Class II aaRS and biotin synthetases| OP:NHOMO 829 OP:NHOMOORG 763 OP:PATTERN ------------------111----------------------------------------2------ 1111111111111111111-111111111111111111141111111111111111111111111111111-----------1--1111111-111-1111111111111------------------------1-111-1---1111111111111111111111111111111111111111111111-1----------------------------------------1------------------------------------------------------------------------------------------11---------------11-----------------1------1111---1--111111111111111111111111111111111-111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-1-1--11-1111-111-11111111111-1----------------------1--111111111111111111111111111111111-1111111111111111111111111111-11211111111111111111111111111111111111111111111111111111111111111--11111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111---11-------------------------------------------------11 --------211-111111-111-1111111111-1111111--1-1111-111-11------1111-11111111-11-111111111-12111111-1112111--13-2-1121-111-1111111111--111---111121-1---11111-1-11121111111171-212222M2221222531332221111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 225 STR:RPRED 90.0 SQ:SECSTR ########cccccccccEEEcccTTcHHHHHHHHHHHHHHccTTTcccEEEEEccccEEEEcTTccHHHHHHHTcEEEEcccccccEEEcTTEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHTTccccEEcccccTTccccETcccccTTcEEETEETTEEEEEEEEEccccHHHHHHHccccccTTTcccGGGTccccccHHHHHHHHHHHHHHHHTcEEcccHHHHHH################# DISOP:02AL 1-6, 240-250| PSIPRED ccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHHHccccccEEEEEEcccEEEccccccHHHcccccccEEEEcccccEEEEcccEEEEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccccccccEEEEcccccccccEEEEEcEEEcccEEEEEEEEEcccccHHHHcccccccccccEEEEHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHcccc //