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Nocardia farcinica IFM 10152 (nfar0)
Gene : ltsA
DDBJ      :ltsA         putative glutamine amidotransferase
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  494/915 : Eukaryota  161/199 : Viruses  0/175   --->[See Alignment]
c.26.2d.153.1
:647 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   28->398,500->558 1ct9D PDBj 6e-28 31.3 %
:RPS:PDB   3->402,488->590 1ct9D PDBj 4e-74 30.1 %
:RPS:SCOP  3->174 1ct9A2  d.153.1.1 * 7e-37 33.8 %
:RPS:SCOP  249->548 1ct9A1  c.26.2.1 * 1e-32 22.3 %
:HMM:SCOP  1->239 1jgtA2 d.153.1.1 * 1.3e-68 46.7 %
:HMM:SCOP  233->625 1q15A1 c.26.2.1 * 2.5e-92 40.1 %
:RPS:PFM   72->224 PF09147 * DUF1933 5e-13 40.0 %
:RPS:PFM   261->435 PF00733 * Asn_synthase 3e-29 40.0 %
:RPS:PFM   481->560 PF00733 * Asn_synthase 6e-14 43.8 %
:HMM:PFM   257->560 PF00733 * Asn_synthase 4.8e-83 40.9 259/269  
:HMM:PFM   2->33 PF00310 * GATase_2 0.00019 35.5 31/362  
:BLT:SWISS 26->647 ASNH_MYCTU 0.0 68.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD56553.1 GT:GENE ltsA GT:PRODUCT putative glutamine amidotransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(1857123..1859066) GB:FROM 1857123 GB:TO 1859066 GB:DIRECTION - GB:GENE ltsA GB:PRODUCT putative glutamine amidotransferase GB:PROTEIN_ID BAD56553.1 LENGTH 647 SQ:AASEQ MCGLLGFLTADAATSEVVDQVYNALHCMRHRGPDERGTWHDDHLVFGFNRLSIIDIEHSHQPLRWGPPENPERYALTFNGEIYNYLELREELAAAHAAEFGDAPMFRTEGDSEAIVAAYHYWGAEAVAKLRGMFGFAIWDTQTRELFLARDPFGIKPLFLATGPGGTAFGSEKKSLLDLLPALRLSDDLDPRALEHYTVLQYVPEPETLHKGIRRLESGTYAVVRPGAAPQVTRYFTPRFPVRPFAPGSAQTRYNEIAAALEDSVAKHMRADVTVGSFLSGGIDSTAVAALAMRHNPNLITFTTGFEREGYSEVDVAAESAAAIGARHIVKVVSPAEFAAAIPEIVWYLDDPVADPALVPLYFVAKEARKHVKVVLSGEGADELFGGYTIYREPLSLKPFEYLPRGLRRLAGRLSERIPDGTRGKSLLHRGSLTLEERYYGNARSFNDAQLRAVLREFRPEWTHQDVTAPIYAQSRGWDPVARMQHLDLFTWLRGDILVKADKMTMANSLELRVPFLDTEVRRVAEQLPFDQKITKDTTKYALRQALEGIVPAHVLHRAKLGFPVPLRHWLRGTELYDWAHTQIAESQTDHLLDKAAITAMLVEHRAGRADHSRRLWTLLVFMVWHGIFVEDRIKPDIQEPVYPVTL GT:EXON 1|1-647:0| BL:SWS:NREP 1 BL:SWS:REP 26->647|ASNH_MYCTU|0.0|68.7|616/652| SEG 86->99|lelreelaaahaae| SEG 175->194|slldllpalrlsddldpral| SEG 312->323|sevdvaaesaaa| SEG 403->414|lprglrrlagrl| BL:PDB:NREP 1 BL:PDB:REP 28->398,500->558|1ct9D|6e-28|31.3|382/495| RP:PDB:NREP 1 RP:PDB:REP 3->402,488->590|1ct9D|4e-74|30.1|448/495| RP:PFM:NREP 3 RP:PFM:REP 72->224|PF09147|5e-13|40.0|135/162|DUF1933| RP:PFM:REP 261->435|PF00733|3e-29|40.0|175/237|Asn_synthase| RP:PFM:REP 481->560|PF00733|6e-14|43.8|80/237|Asn_synthase| HM:PFM:NREP 2 HM:PFM:REP 257->560|PF00733|4.8e-83|40.9|259/269|Asn_synthase| HM:PFM:REP 2->33|PF00310|0.00019|35.5|31/362|GATase_2| GO:PFM:NREP 4 GO:PFM GO:0004066|"GO:asparagine synthase (glutamine-hydrolyzing) activity"|PF00733|IPR001962| GO:PFM GO:0006529|"GO:asparagine biosynthetic process"|PF00733|IPR001962| GO:PFM GO:0004066|"GO:asparagine synthase (glutamine-hydrolyzing) activity"|PF00733|IPR001962| GO:PFM GO:0006529|"GO:asparagine biosynthetic process"|PF00733|IPR001962| RP:SCP:NREP 2 RP:SCP:REP 3->174|1ct9A2|7e-37|33.8|160/192|d.153.1.1| RP:SCP:REP 249->548|1ct9A1|1e-32|22.3|278/305|c.26.2.1| HM:SCP:REP 1->239|1jgtA2|1.3e-68|46.7|197/206|d.153.1.1|1/1|N-terminal nucleophile aminohydrolases (Ntn hydrolases)| HM:SCP:REP 233->625|1q15A1|2.5e-92|40.1|292/0|c.26.2.1|1/1|Adenine nucleotide alpha hydrolases-like| OP:NHOMO 1085 OP:NHOMOORG 678 OP:PATTERN ---1-------------------------------1211211111-11-1111-2112-12------- 2-4-311111111112211-12111211111122222122-2111-1----1-----2--45--322-11-1-------12---1-1-111111-----1-223123------------------1------1-312--55---3-3112-------1111-2--2---3---1-1----1-11-------12233333433333333321222333422221--11111131---------------------1111112111221111111---222--------------------------------------------11-21-------1-1-211----1-1--21111113111-5112211---112---1-------233----2-31----------1-11121311231-2---1-2---221----------1---111111111--11536------------------------------1111-14412111121-333211--33331211--1-------112---114-1--33-1-32-------232433--121-3313222-1312121--21211-52-32-2----------------3412-1-111211112111111131111112211111---4314------11111111111111111-11111111111111111111111111-11111111111111-12111111111111111111111--1122222----3-4------------------------2111-3315311211112111211111111111111111111111133323222221111114--------------------1--------------------------1-------- 1---25--1-----2-1212-1122421-222211-11-11112221112211111212111111111-1111112222211111111-11111111111111612-131211111-21---1121-1-AC3-111-11-1-111111--11--1111113--31-11321113-1112M2221-311316111411-2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 595 STR:RPRED 92.0 SQ:SECSTR #cEEEEEEcccccHHHHHHHHHHHHHTTGGGcccEEEEEEcccEEEEEEEcccccTTTccccEEEEEccccccEEEEEEEEETTHHHHHHHHHHHTcccHTTTcccccccTTHHHHHHHHHHTTTTGGGccEEEEEEEEETTTTEEEEEEcTTcccccEEEEcTTccEEEccGGGTTTTccEEEEccTTcEEEEcEEccccEEEEcTTTccEEEEccTTEEEETTTTcTTEEEEccccGGGcGGGTTTTccccHHHHHHHHHHHHHHTTcccccEEEEccccHHHHHHHHHHHHHccccEEEEEEcEETTcHHHHHHHHHHHHHTcEEEEEEccHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHHHTccEEEccTTHHHHHTccGGGGGcccHHHHHHHHHHHHHHHHHHHHTTccTccHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHGGGTTccEEEEEEcGGHHHHHHHHHHHHHHHGHHHHHGGGTHHHHHHHHHHTTTcEEEcGGGcHHHHHHHHHccGGGGcccccTTHHHHHHHGGGccHHHHHcccccHHcTTcHHHHH#HHHHHHHHHccHHHHHHHHHTHH################################################## DISOP:02AL 647-648| PSIPRED ccEEEEEEccccccHHHHHHHHHHHHHHHHHccccccEEEEccEEEEEEEEEEEcccccccccccccccccccEEEEEEEEEEcHHHHHHHHHHcccccccccEEEccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccEEEEEEcccccccEEEEEEccEEEEEccHHHHHHcccccEEcccccHHHHHHHHHccccccccccccccccccccEEEEEEccccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHccccEEEEEcHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccEEEEEcccHHHHcccccHHcccccccHHHHccHHHHHHHHHHHHHcccHHHHHHHHHHccccHHHHHHHHHHHccHHHHHHHHccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccHHHHHHHHHccHHHHHcccccHHHHHHHHHHcccHHHHccccccccccHHHHHccHHHHHHHHHHccHHHHcccccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccc //