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Nocardia farcinica IFM 10152 (nfar0)
Gene : mce1D
DDBJ      :mce1D        putative Mce family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:423 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   41->111 PF02470 * MCE 3e-08 39.4 %
:HMM:PFM   39->113 PF02470 * MCE 1.3e-17 36.0 75/81  
:HMM:PFM   169->297 PF11887 * DUF3407 8.6e-11 20.2 129/267  
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55385.1 GT:GENE mce1D GT:PRODUCT putative Mce family protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 556168..557439 GB:FROM 556168 GB:TO 557439 GB:DIRECTION + GB:GENE mce1D GB:PRODUCT putative Mce family protein GB:PROTEIN_ID BAD55385.1 LENGTH 423 SQ:AASEQ MNSSKIFRKPPRWVLLLAGAVVVALVAAGAYQGITRLGTTTVTAYFPSTNGLYAGDDVRVLGVKVGRIDKVEPGHERVKVTMTVDRGVDLPADARAVIVSPSLVTARFIQLAPAYTGGEKLGDGDEIPIERTAVPVEWDDIKAELSKLATTLGPVGDDQQGSFGRFVDTAAENLDGNGERMRETLRELSATLNTLSDGRTDLFGTIRNLQQFVEVLSASNEQIVQFGGRLASVSSVLAGVSEDLGAGLDNLDLAVADVQRFLDSSGAELTESTQRLAEVTQILVDKRPEVERVLHSGPTALVNFYQLYKPAQGTLTGAVALNNTADPLSFLCGSVRALEENDSDRSADLCATYLAPVIDSLAMNYAPIMLNPATGVQAFPNQLTFSPPSLANEVPDEVKNPRPVPAVTVPNGLAGLAIPGGGR GT:EXON 1|1-423:0| COIL:NAA 13 COIL:NSEG 1 COIL:REGION 257->269| TM:NTM 1 TM:REGION 11->33| SEG 14->30|vlllagavvvalvaaga| SEG 230->241|lasvssvlagvs| SEG 243->258|dlgagldnldlavadv| RP:PFM:NREP 1 RP:PFM:REP 41->111|PF02470|3e-08|39.4|71/81|MCE| HM:PFM:NREP 2 HM:PFM:REP 39->113|PF02470|1.3e-17|36.0|75/81|MCE| HM:PFM:REP 169->297|PF11887|8.6e-11|20.2|129/267|DUF3407| OP:NHOMO 311 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- --------------FFE65-5I22EC777779LFJFBIBH----------------------7-168242-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 264-270, 419-423| PSIPRED ccccccccHHHHHHHHHHHHHHHHHHHHHHHHEEEccccEEEEEEEcccccccccccEEEEcEEEEEEEEEEEcccEEEEEEEEcccEEcccccEEEEEEcccEEEEEEEEEcccccccccccccEEEccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHcccccccccccHHHHccccccccccccccccccccccEEccccEEEcccccccccccccccccccccccccccccccccccccc //