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Nocardia farcinica IFM 10152 (nfar0)
Gene : mce1F
DDBJ      :mce1F        putative Mce family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  35/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.1.3
:473 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   169->262 1dlcA PDBj 8e-05 21.3 %
:RPS:SCOP  199->262 1ciyA3  f.1.3.1 * 9e-05 17.5 %
:RPS:PFM   41->112 PF02470 * MCE 6e-05 33.3 %
:HMM:PFM   40->114 PF02470 * MCE 6.7e-16 36.0 75/81  
:HMM:PFM   430->446 PF07886 * BA14K 2.4e-05 52.9 17/31  
:BLT:SWISS 40->129 YRBD_ECOLI 2e-04 36.7 %
:BLT:SWISS 118->170 NIFD_METMP 8e-04 41.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55387.1 GT:GENE mce1F GT:PRODUCT putative Mce family protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 558659..560080 GB:FROM 558659 GB:TO 560080 GB:DIRECTION + GB:GENE mce1F GB:PRODUCT putative Mce family protein GB:PROTEIN_ID BAD55387.1 LENGTH 473 SQ:AASEQ MKLTRFVRIQLAIFAVLTVVGLTVMAGTYVQLPAMFGIGRYEVTVELAATGGLYEHANVAYRGTNVGRVQEVRLTPDGVAAKLSIDSSQKIPADVDAWVRSVSAIGEQYVDLIPPEQPGRGNLADGAVIPVERTKLPQDVGTLLDQTDRLLSSVADTRLRQVIDEAFKAFNGAGPDLQRFIDSASLLVQEAQNSTEPTKKLIEQIGPLLDTQVRSDSAIRSWTADLATVTDQLRAHDPALRNLLRDSPAAMQRVTQQFNELQPTLPILLSNLVSMGQVSTIYHAGIEQILVVYPPLVAALMTAIRGPLEYGVLVDFMTTVHDPPACTTGFLPPDQRRSPSDTTFVETPPGLYCKIPQDSPIEVRGIRNTPCMEFPGVRAPTPELCRTGYVPEGDNPPFGPPNPVAPAGGPGTTESTEVAPAAYTAPAAARSYDPSTGVYIGTDGRTYRQGDVGPGGSGTVPASWQAMLEEQQR GT:EXON 1|1-473:0| BL:SWS:NREP 2 BL:SWS:REP 40->129|YRBD_ECOLI|2e-04|36.7|90/183| BL:SWS:REP 118->170|NIFD_METMP|8e-04|41.2|51/100| TM:NTM 1 TM:REGION 11->33| SEG 390->414|vpegdnppfgppnpvapaggpgtte| SEG 419->429|apaaytapaaa| RP:PDB:NREP 1 RP:PDB:REP 169->262|1dlcA|8e-05|21.3|89/584| RP:PFM:NREP 1 RP:PFM:REP 41->112|PF02470|6e-05|33.3|72/81|MCE| HM:PFM:NREP 2 HM:PFM:REP 40->114|PF02470|6.7e-16|36.0|75/81|MCE| HM:PFM:REP 430->446|PF07886|2.4e-05|52.9|17/31|BA14K| RP:SCP:NREP 1 RP:SCP:REP 199->262|1ciyA3|9e-05|17.5|63/223|f.1.3.1| OP:NHOMO 340 OP:NHOMOORG 35 OP:PATTERN -------------------------------------------------------------------- --------------IGG44-4J33II66666CRHLHDEDJ----------------------5-278234---------------------------------------------------------------------------------------1---1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 89 STR:RPRED 18.8 SQ:SECSTR ########################################################################################################################################################################ccccHHH#HHHHHHHHHHHTcccHH###HHHHHHHHHHHHHTccc#cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHH################################################################################################################################################################################################################### DISOP:02AL 117-127, 130-132, 472-473| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEccccccccccEEEccEEEEEEEEEEEEccEEEEEEEEccccccccccEEEEEEccccEEHHHEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccc //