Nocardia farcinica IFM 10152 (nfar0)
Gene : mce2C
DDBJ :mce2C putative Mce family protein
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 32/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
e.8.1
:348 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:SCOP 242->321 1bgxT4 e.8.1.1 * 2e-07 25.3 %
:RPS:PFM 55->99 PF02470 * MCE 4e-04 46.7 %
:HMM:PFM 53->127 PF02470 * MCE 5.2e-13 26.7 75/81
:HMM:PFM 160->261 PF11887 * DUF3407 0.00015 15.7 102/267
:HMM:PFM 242->321 PF00476 * DNA_pol_A 0.00037 27.8 79/383
:BLT:SWISS 55->138 YRBD_ECOLI 6e-04 33.3 %
:TM
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55962.1
GT:GENE mce2C
GT:PRODUCT putative Mce family protein
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 1243727..1244773
GB:FROM 1243727
GB:TO 1244773
GB:DIRECTION +
GB:GENE mce2C
GB:PRODUCT putative Mce family protein
GB:PROTEIN_ID BAD55962.1
LENGTH 348
SQ:AASEQ MQTMISRWFGGDRPVLDDAARTRREVRLGIVGVLAVVLGVVAAGVLYAVPLGKSTYTAELTEAQSVKVGDDVRLAGVTVGAVTSLELKPDRVVMRFTVDDDVFVGDQTSLDIRMLTLVGGHYVALFPAGTEPLGDGVIPADRVRLPYSLMETFQDATAPLREVNGDTLRRNLAELDRAVTDAPETLRTTLDTVGSYVDAIDRQRAQVSNAIAVADEYVTMYDGAKSDLRRLMENVILLEDVLIDKRAELREAVALLTSVVQRVAALAPAWESSVRPRADQLSAAIGRLTEMGGTLEPVIATTRELGEKLRTLVIPEEGLVIDQSAQTVPAPAGLELPDVCVPVPGRQC
GT:EXON 1|1-348:0|
BL:SWS:NREP 1
BL:SWS:REP 55->138|YRBD_ECOLI|6e-04|33.3|84/183|
TM:NTM 1
TM:REGION 28->50|
SEG 26->52|vrlgivgvlavvlgvvaagvlyavplg|
RP:PFM:NREP 1
RP:PFM:REP 55->99|PF02470|4e-04|46.7|45/81|MCE|
HM:PFM:NREP 3
HM:PFM:REP 53->127|PF02470|5.2e-13|26.7|75/81|MCE|
HM:PFM:REP 160->261|PF11887|0.00015|15.7|102/267|DUF3407|
HM:PFM:REP 242->321|PF00476|0.00037|27.8|79/383|DNA_pol_A|
RP:SCP:NREP 1
RP:SCP:REP 242->321|1bgxT4|2e-07|25.3|79/406|e.8.1.1|
OP:NHOMO 203
OP:NHOMOORG 32
OP:PATTERN -------------------------------------------------------------------- --------------7A944-4E22AB555556F9B9B56C----------------------2-153222----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 75
STR:RPRED 21.6
SQ:SECSTR #################################################################################################################################################################################################################################################HHHHHHHHHHHHHHHHHHTTcTTcHHHHccTTEccEEETTccTTcccEEEcccTTccccTTcTTHHHHHHTccGG################################
DISOP:02AL 1-2|
PSIPRED ccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccEEEEcEEEEEEEEEEEcccEEEEEEEEcccEEcccccEEEEEEcccEEEHEEEEEccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccccHHHccccEEccccccc
//
[GTOP]
