[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : mce3E
DDBJ      :mce3E        putative Mce family protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  33/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:346 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   29->107 3gteA PDBj 7e-04 32.0 %
:RPS:PDB   65->125 3d3aA PDBj 4e-04 20.0 %
:RPS:PFM   49->120 PF02470 * MCE 3e-06 36.1 %
:RPS:PFM   150->251 PF04097 * Nic96 8e-04 29.6 %
:HMM:PFM   48->122 PF02470 * MCE 3.4e-11 24.0 75/81  
:BLT:SWISS 49->170 YRBD_ECOLI 2e-06 30.0 %
:BLT:SWISS 142->317 HISX_ECOL6 8e-04 28.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57819.1 GT:GENE mce3E GT:PRODUCT putative Mce family protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(3156305..3157345) GB:FROM 3156305 GB:TO 3157345 GB:DIRECTION - GB:GENE mce3E GB:PRODUCT putative Mce family protein GB:PROTEIN_ID BAD57819.1 LENGTH 346 SQ:AASEQ MSVFAPSEAGRGARRWRIGALALVLVVAGCGFDPSDHTLPGTGVRGAHYRLVVEFESLLSLPAGATVRSNGAEVGAVERIRLDGHAALADLDIRAEVGLPVGTRAELRQTTVLGDIYIALLPPPHPGTDLLRDGDRIPLRDTETGPQIEQILERLAAFVNGGSATRTQDALEQLVAMMPADPAETSALAAQLGTDLAATVEHLPDLDRMIAATDAVSARLHRMREEVGFLFSETARRRLDRVPQFMTAVLNVVIDVNTLTTGLDWLIPRLPHINEALEKAATLLREPSPDAGTWAGNGARLSELMTGEVVPFLGAPALNVRRIGVTGSPSGEVDALILLRLIGVLP GT:EXON 1|1-346:0| BL:SWS:NREP 2 BL:SWS:REP 49->170|YRBD_ECOLI|2e-06|30.0|120/183| BL:SWS:REP 142->317|HISX_ECOL6|8e-04|28.4|169/434| TM:NTM 1 TM:REGION 17->36| SEG 9->22|agrgarrwrigala| BL:PDB:NREP 1 BL:PDB:REP 29->107|3gteA|7e-04|32.0|75/341| RP:PDB:NREP 1 RP:PDB:REP 65->125|3d3aA|4e-04|20.0|60/583| RP:PFM:NREP 2 RP:PFM:REP 49->120|PF02470|3e-06|36.1|72/81|MCE| RP:PFM:REP 150->251|PF04097|8e-04|29.6|98/599|Nic96| HM:PFM:NREP 1 HM:PFM:REP 48->122|PF02470|3.4e-11|24.0|75/81|MCE| GO:PFM:NREP 2 GO:PFM GO:0005643|"GO:nuclear pore"|PF04097|IPR007231| GO:PFM GO:0006810|"GO:transport"|PF04097|IPR007231| OP:NHOMO 147 OP:NHOMOORG 33 OP:PATTERN -------------------------------------------------------------------- --------------77644-471177444446A6867648----------------------2-122111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 95 STR:RPRED 27.5 SQ:SECSTR ############################GGGGcTTcEEEEEEEEEcccHHHHH##HHHTcGGGHEEEEETTEEEEEEETEEEccccTTEEEEEEEEcccccGGGGcHcccEEEEEEEEEETTEEE############################################################################################################################################################################################################################# DISOP:02AL 1-7, 125-130| PSIPRED ccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEccccccccccEEEEcEEEEEEEEEEEcccEEEEEEEEccccccccccEEEEEEcccEEEEEEEEEEcccccccccccccEEcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccc //