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Nocardia farcinica IFM 10152 (nfar0)
Gene : mecs
DDBJ      :mecs         putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Swiss-Prot:ISPF_NOCFA   RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase;         Short=MECPS;         Short=MECDP-synthase;         EC=4.6.1.12;

Homologs  Archaea  0/68 : Bacteria  535/915 : Eukaryota  24/199 : Viruses  0/175   --->[See Alignment]
d.79.5
:155 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   2->127 2uzhC PDBj 3e-38 57.1 %
:RPS:PDB   1->154 3b6nA PDBj 3e-21 33.1 %
:RPS:SCOP  2->151 1gx1A  d.79.5.1 * 1e-42 34.0 %
:HMM:SCOP  1->152 1jy8A_ d.79.5.1 * 1e-55 49.3 %
:RPS:PFM   1->154 PF02542 * YgbB 1e-22 40.3 %
:HMM:PFM   1->152 PF02542 * YgbB 7.8e-55 44.7 152/157  
:BLT:SWISS 1->155 ISPF_NOCFA 1e-76 100.0 %
:PROS 35->50|PS01350|ISPF
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55279.1 GT:GENE mecs GT:PRODUCT putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 451819..452286 GB:FROM 451819 GB:TO 452286 GB:DIRECTION + GB:GENE mecs GB:PRODUCT putative 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GB:PROTEIN_ID BAD55279.1 LENGTH 155 SQ:AASEQ MRVGIGSDVHPIEPGRPCWMAGLLFEGEDGCSGHSDGDVAAHALCDALLSAAGLGDVGAVFGTGRPEWADVSGAAMLTEVRRLLGEAGFEVVNAAVQVIGNRPKIGPRRAEAQRVLGDLLDAPVSVSGTTTDGLGLTGRGEGIAAVATALLRPRV GT:EXON 1|1-155:0| SW:ID ISPF_NOCFA SW:DE RecName: Full=2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Short=MECPS; Short=MECDP-synthase; EC=4.6.1.12; SW:GN Name=ispF; OrderedLocusNames=NFA_4370; SW:KW Complete proteome; Isoprene biosynthesis; Lyase; Metal-binding. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->155|ISPF_NOCFA|1e-76|100.0|155/155| GO:SWS:NREP 3 GO:SWS GO:0008299|"GO:isoprenoid biosynthetic process"|Isoprene biosynthesis| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| PROS 35->50|PS01350|ISPF|PDOC01048| SEG 128->142|gtttdglgltgrgeg| BL:PDB:NREP 1 BL:PDB:REP 2->127|2uzhC|3e-38|57.1|126/155| RP:PDB:NREP 1 RP:PDB:REP 1->154|3b6nA|3e-21|33.1|139/150| RP:PFM:NREP 1 RP:PFM:REP 1->154|PF02542|1e-22|40.3|154/157|YgbB| HM:PFM:NREP 1 HM:PFM:REP 1->152|PF02542|7.8e-55|44.7|152/157|YgbB| GO:PFM:NREP 2 GO:PFM GO:0008685|"GO:2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity"|PF02542|IPR003526| GO:PFM GO:0016114|"GO:terpenoid biosynthetic process"|PF02542|IPR003526| RP:SCP:NREP 1 RP:SCP:REP 2->151|1gx1A|1e-42|34.0|150/157|d.79.5.1| HM:SCP:REP 1->152|1jy8A_|1e-55|49.3|152/155|d.79.5.1|1/1|IpsF-like| OP:NHOMO 572 OP:NHOMOORG 559 OP:PATTERN -------------------------------------------------------------------- 11--11111111-111111-11111111111111111111111111111111111111111111111111111111111-1111111111111111---------111-11111111111-----111-1111111-----111-111111111111111111111111111111111111-11--11111111111111111111111-111111111111--1------111-------------------1---------------------------------------------------------------------11-11-------1-1-1111111-1-111-11-111111111---111--111111111111111111111111111111111111-22111111111-1111111111111111111111111111111111111111111111111111----------------1111111111111111111111111111111111111111111-11111-1--1-1-1-11-1111-11111111--1--1-111-111111--1-1111-11111111--1111111----1-1111111111-11111---1--11-1-1111111111111111111-----1-1--111--111------------------1----------------11--1---------------------------------------1-1-----------11-111111------1111111111----1--------1--------1---------1111----------11111111111111--11111111--------11---------------------------11111111-11- --------1----------------11---------------------------------------------------------------------------------2-------------------------------------------------------------2----11117111111112-2111----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 99.4 SQ:SECSTR EEEEEEEEEEEEEcccccEEEEEEETTEEEEEEcccccHHHHHHHHHHHHHTTccccTHHHccccGGGTTccHHHHHHHHHHHHHHTTEEEEEEEEEEEccccccHHHHHHHHHHHHHHHTccEEEEEEccTTcHHHHTTcEEEEEEEEEEEEc# PSIPRED cEEEccEEEEEEcccccEEEEEEEEccccccccccHHHHHHHHHHHHHHHHHccccccEEcccccHHHccccHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEEcccccccccccEEEEEEEEEEEEcc //