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Nocardia farcinica IFM 10152 (nfar0)
Gene : mrr
DDBJ      :mrr          putative 5-methyladenine/5-methylcytosine- specific restriction endonuclease
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  81/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.52.1
:308 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  167->287 1y88A2  c.52.1.30 * 2e-11 14.8 %
:HMM:SCOP  167->294 1y88A2 c.52.1.30 * 6.4e-19 36.9 %
:RPS:PFM   212->280 PF04471 * Mrr_cat 6e-16 59.1 %
:HMM:PFM   175->282 PF04471 * Mrr_cat 1e-29 51.5 99/100  
:HMM:PFM   34->50 PF07813 * LTXXQ 0.00024 41.2 17/23  
:BLT:SWISS 8->308 MRR_ECOLI 2e-41 42.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57610.1 GT:GENE mrr GT:PRODUCT putative 5-methyladenine/5-methylcytosine- specific restriction endonuclease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 2926797..2927723 GB:FROM 2926797 GB:TO 2927723 GB:DIRECTION + GB:GENE mrr GB:PRODUCT putative 5-methyladenine/5-methylcytosine- specific restriction endonuclease GB:PROTEIN_ID BAD57610.1 LENGTH 308 SQ:AASEQ MTGPVSAMPVWSGFLTPVLKVLTDGKIWRKRDLHTAVEDHLGLTAEQRAEVLPSGQRRVDNRIGWALSGLYRAKLVDKPARATFVITDAGRALLQAHPDGITEKTLKALPEYRDYTPSRSGSSSVAPTTGTAEADEDVDPLEQIEHGVERLHSEVAADLLARLRGQDPAFLEQSVLDVLVAMGYGGTEGRAARIGGSGDGGVDGVIDQDPLGLERIYVQAKRYGADNTVGRPEIQAFVGALHGVGAARGVFITTSAFTSGAREYAKNIGTRIILIDGGRLAELMIRYGVAVQTRQTFTVVEVDEDYFE GT:EXON 1|1-308:0| BL:SWS:NREP 1 BL:SWS:REP 8->308|MRR_ECOLI|2e-41|42.4|297/100| SEG 189->206|graariggsgdggvdgvi| RP:PFM:NREP 1 RP:PFM:REP 212->280|PF04471|6e-16|59.1|66/99|Mrr_cat| HM:PFM:NREP 2 HM:PFM:REP 175->282|PF04471|1e-29|51.5|99/100|Mrr_cat| HM:PFM:REP 34->50|PF07813|0.00024|41.2|17/23|LTXXQ| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF04471|IPR007560| GO:PFM GO:0004519|"GO:endonuclease activity"|PF04471|IPR007560| GO:PFM GO:0009307|"GO:DNA restriction-modification system"|PF04471|IPR007560| RP:SCP:NREP 1 RP:SCP:REP 167->287|1y88A2|2e-11|14.8|115/125|c.52.1.30| HM:SCP:REP 167->294|1y88A2|6.4e-19|36.9|122/0|c.52.1.30|1/1|Restriction endonuclease-like| OP:NHOMO 88 OP:NHOMOORG 87 OP:PATTERN ----------------------------------1---------1--1--111--------------- -----1-1---1-----11-1-----11111--1-11---------11-------1------1-------------11---------1------11----1------------------------------------11--------1--111-111----------11----------------2----------------------------------------------------------------------1-----1-11---1-----1--------------------------------------------------------------------------------------------------1---------------------------------------------------1--------1---------------------------------------------------------------1--------------------------------------1--------------------------1---------1----------------1---11----1-11----------------------11--------------------------------------------------1---11-1------1--------111111------1--1--1----1--1111---------------------1-------------1------------------------------------------------------------------------------------------1----11------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 118-134| PSIPRED ccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHccccEEEEHHHHHHHHHHHHHcccccccccEEEEcHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHcccEEccEEEEcccccccEEEEEEEEcccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHcccEEEEEcHHHHHHHHHHccccEEEEEEEEEEEcHHHHcc //