[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : mshD
DDBJ      :mshD         putative mycothiol synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  62/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.108.1
:303 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   35->299 2c27A PDBj 2e-51 44.8 %
:RPS:PDB   37->133 3e0kA PDBj 6e-04 10.4 %
:RPS:PDB   154->298 3dsbA PDBj 5e-06 12.1 %
:RPS:SCOP  35->157 1y9kA1  d.108.1.1 * 2e-05 18.5 %
:RPS:SCOP  154->294 1on0A  d.108.1.1 * 1e-07 14.7 %
:HMM:SCOP  9->300 1p0hA_ d.108.1.1 * 4.7e-42 32.3 %
:HMM:PFM   55->120 PF00583 * Acetyltransf_1 7.4e-12 33.3 66/83  
:HMM:PFM   215->289 PF00583 * Acetyltransf_1 6.9e-18 32.0 75/83  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55444.1 GT:GENE mshD GT:PRODUCT putative mycothiol synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 617154..618065 GB:FROM 617154 GB:TO 618065 GB:DIRECTION + GB:GENE mshD GB:PRODUCT putative mycothiol synthase GB:PROTEIN_ID BAD55444.1 LENGTH 303 SQ:AASEQ MGDITVRWTQRLDGETADAVRELLAAASAADGVAPVSEQAVLSLGEPGAARHLLAEHDGELAGYANLVPAHGDHPAMAEAAVAPARRGRGIGTALVREALAAGGADARVWAHGDRPAAKAVAARLGLRTARELWQMRRSLATPQLPELVVPDGIVLRTYAGPADDAELLRVNNAAFDWHPEQGGWTQRDIAVRRAESWFDPAGLFLATDTAAPDRVLGFHWTKVHADEQPPVGEVYVVGIDPAAQGRGLGRLLTLAGLHHLRERGLGGVLLYTEADNTAAVNTYTKLGFAPAHVDVAYAANGA GT:EXON 1|1-303:0| SEG 17->34|adavrellaaasaadgva| SEG 76->92|amaeaavaparrgrgig| SEG 243->271|aaqgrglgrlltlaglhhlrerglggvll| BL:PDB:NREP 1 BL:PDB:REP 35->299|2c27A|2e-51|44.8|261/301| RP:PDB:NREP 2 RP:PDB:REP 37->133|3e0kA|6e-04|10.4|96/144| RP:PDB:REP 154->298|3dsbA|5e-06|12.1|140/146| HM:PFM:NREP 2 HM:PFM:REP 55->120|PF00583|7.4e-12|33.3|66/83|Acetyltransf_1| HM:PFM:REP 215->289|PF00583|6.9e-18|32.0|75/83|Acetyltransf_1| RP:SCP:NREP 2 RP:SCP:REP 35->157|1y9kA1|2e-05|18.5|119/152|d.108.1.1| RP:SCP:REP 154->294|1on0A|1e-07|14.7|136/156|d.108.1.1| HM:SCP:REP 9->300|1p0hA_|4.7e-42|32.3|288/0|d.108.1.1|1/1|Acyl-CoA N-acyltransferases (Nat)| OP:NHOMO 62 OP:NHOMOORG 62 OP:PATTERN -------------------------------------------------------------------- ---1111111111111111-11111-1111111111111111111111111-111111--111-1111111---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 265 STR:RPRED 87.5 SQ:SECSTR ##################################cccccccHHHHHHHGGGEEEEEETTEEEEEEEEEEEGGGTEEEEEEEEcGGGccccHHHHHHHHHHHHHHTTTccEEEccccccHHHcccTHHHHTccGGGccccccccccccccccTTEEEEEccccGGHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHcGGGcEEEEEEETTTTTEEEEEEEEEEETTTTEEEEEEEEEEEcGGGccccHHHHHHHHHHHHHHHcTTEEEEccccTTcTTHHHHHHTTTccccccccccE#### DISOP:02AL 1-2, 302-303| PSIPRED cccEEEEEcccccHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccEEEEEEEccEEEEEEEEEccccccccEEEEEEccHHHcccHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHcccccccHHHEEEEcccccccccccccccEEEEEccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHccccccEEEEEEEccccEEEEEEEEEEEccccccEEEEEEEEEcHHHHcccHHHHHHHHHHHHHHHccccEEEEEEEcccHHHHHHHHHcccEEEEEEcccccccc //