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Nocardia farcinica IFM 10152 (nfar0)
Gene : mutY
DDBJ      :mutY         putative A/G-specific adenine glycosylase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  720/915 : Eukaryota  108/199 : Viruses  0/175   --->[See Alignment]
a.96.1
:295 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   12->227 1vrlA PDBj 1e-30 34.9 %
:RPS:PDB   10->216 2abkA PDBj 1e-29 19.5 %
:RPS:SCOP  10->206 1ornA  a.96.1.1 * 1e-36 21.7 %
:HMM:SCOP  3->227 1munA_ a.96.1.2 * 2.6e-55 33.8 %
:RPS:PFM   37->133 PF00730 * HhH-GPD 1e-06 40.2 %
:HMM:PFM   38->156 PF00730 * HhH-GPD 8.9e-18 32.6 86/121  
:HMM:PFM   194->206 PF10576 * EndIII_4Fe-2S 1.5e-05 69.2 13/17  
:BLT:SWISS 11->206 MUTYH_HUMAN 2e-27 38.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55271.1 GT:GENE mutY GT:PRODUCT putative A/G-specific adenine glycosylase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(445596..446483) GB:FROM 445596 GB:TO 446483 GB:DIRECTION - GB:GENE mutY GB:PRODUCT putative A/G-specific adenine glycosylase GB:PROTEIN_ID BAD55271.1 LENGTH 295 SQ:AASEQ MGDGGGIDHDALLDWYAAAARDLPWRRPGVTAWQILMSEIMLQQTPVARVQPIWLEWVRRWPVPSAMAASSQAEVLRAWGKLGYPRRALRLHECAGVLAAEHGDEVPADVDVLLGLPGIGAYTARAVACFAYGIRVPVVDTNVRRVVARAVHGRAEAGNPSARDLAETEALLPAQVEPAARFSAALMELGATVCTARNPDCGRCPLPRCAWVSAGRPASEVVRRTQKYEGTDRQARGRLLDVLRAASGPVERVRLDLAWTRDPGQRDRALDSLLVDGLIEQTADGLFALAGEGER GT:EXON 1|1-295:0| BL:SWS:NREP 1 BL:SWS:REP 11->206|MUTYH_HUMAN|2e-27|38.3|193/546| SEG 135->157|rvpvvdtnvrrvvaravhgraea| BL:PDB:NREP 1 BL:PDB:REP 12->227|1vrlA|1e-30|34.9|215/346| RP:PDB:NREP 1 RP:PDB:REP 10->216|2abkA|1e-29|19.5|200/211| RP:PFM:NREP 1 RP:PFM:REP 37->133|PF00730|1e-06|40.2|97/144|HhH-GPD| HM:PFM:NREP 2 HM:PFM:REP 38->156|PF00730|8.9e-18|32.6|86/121|HhH-GPD| HM:PFM:REP 194->206|PF10576|1.5e-05|69.2|13/17|EndIII_4Fe-2S| GO:PFM:NREP 1 GO:PFM GO:0006284|"GO:base-excision repair"|PF00730|IPR003265| RP:SCP:NREP 1 RP:SCP:REP 10->206|1ornA|1e-36|21.7|189/214|a.96.1.1| HM:SCP:REP 3->227|1munA_|2.6e-55|33.8|225/225|a.96.1.2|1/1|DNA-glycosylase| OP:NHOMO 924 OP:NHOMOORG 848 OP:PATTERN 11--------------1-1---1-11121111--1--------11111----1--------------- 2111111111111111111-11111111111111111111111111111111111211--1122111111121111111121-1----111111221--111111111111111111111111111111111111122211---11112111-2111-111111-11------11-----11-1112111-211111111111111111111111111111111111111111111111111111111111111-1-11-----11--111--11-111111111111111111111111111111111-1111111111111-111-------------------1----2----11-------1-------1-1111111111111111111111111111111111--1----111111111111111111111111111111111111111111111-111-----------------------------111111111111111111111111111111111111111111111111111111111111111-11111111111111121111211-1111---111-1111111112-----111111111111111-1-1111111111111111111111111111111111--1111111111111111111111111111-1111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111-11111111111111111111111111111111---------11111111111111111111111111111--1-111111---------11-----------------------------------111 11--111-311--11--11-----------------------------11111111-11111------------------------11-111-1111111--11-1-12-2111112111111121-51GA5-31311-111111--11-11-1-211133---11-------2111-17111-111-111111--111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 75.3 SQ:SECSTR #####TTTHHHHHHHHHHHccccccccccccHHHHHHHHHHTTTccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHTTcTTHHHHHHHHHHHHHHHHHTTTcccccHHHHHHcTTccHHHHHHHHHHHHccTTcccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHccGTTTHHHHHHHHHHHTcccccccGGGcTTGGcccTTccccGGGccccccc#################################################################### DISOP:02AL 1-2, 216-233, 249-251, 293-295| PSIPRED cccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccccHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHcccccccHHHHHHHccccHHHHHHHHHHHHHHcccEEccccEEEccccccc //