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Nocardia farcinica IFM 10152 (nfar0)
Gene : nbtA
DDBJ      :nbtA         thioesterase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  158/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:251 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->234 3flbA PDBj 1e-28 36.3 %
:RPS:PDB   6->215 2cbgA PDBj 1e-05 11.8 %
:RPS:SCOP  15->243 1jmkC  c.69.1.22 * 1e-15 20.0 %
:HMM:SCOP  7->243 1xktA_ c.69.1.22 * 2.2e-40 34.7 %
:RPS:PFM   40->230 PF00975 * Thioesterase 3e-12 30.1 %
:HMM:PFM   21->241 PF00975 * Thioesterase 4.7e-45 31.8 217/229  
:BLT:SWISS 7->243 MBTB_MYCTU 4e-42 42.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55608.1 GT:GENE nbtA GT:PRODUCT thioesterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 822348..823103 GB:FROM 822348 GB:TO 823103 GB:DIRECTION + GB:GENE nbtA GB:PRODUCT thioesterase GB:PROTEIN_ID BAD55608.1 LENGTH 251 SQ:AASEQ MARELGWLRQFQAPRSDSLPPLIVFPHAGAGASAYRAFAKTLAENFDVVVVQYPGRQDRAREAAAQTLPELAEGTLAAFRESAHHTGAPLTVFGHSMGAIVAFEFVRLAEAAGLPVRLLAASSAAAPGRIAELPGHPTEDEELLDHMTALNGTGAEVMGSRDVLRMALPVMKADYRAFDAYACPADVRIAAPVRVLGGDDDPFVAPRDLYAWSAHSSAEVAVTLFAGNHFYLNDHVEGIAELLVPEKSSVA GT:EXON 1|1-251:0| BL:SWS:NREP 1 BL:SWS:REP 7->243|MBTB_MYCTU|4e-42|42.7|232/1414| SEG 28->39|agagasayrafa| SEG 118->126|llaassaaa| BL:PDB:NREP 1 BL:PDB:REP 7->234|3flbA|1e-28|36.3|223/245| RP:PDB:NREP 1 RP:PDB:REP 6->215|2cbgA|1e-05|11.8|195/210| RP:PFM:NREP 1 RP:PFM:REP 40->230|PF00975|3e-12|30.1|186/219|Thioesterase| HM:PFM:NREP 1 HM:PFM:REP 21->241|PF00975|4.7e-45|31.8|217/229|Thioesterase| GO:PFM:NREP 2 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00975|IPR001031| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF00975|IPR001031| RP:SCP:NREP 1 RP:SCP:REP 15->243|1jmkC|1e-15|20.0|200/222|c.69.1.22| HM:SCP:REP 7->243|1xktA_|2.2e-40|34.7|225/0|c.69.1.22|1/1|alpha/beta-Hydrolases| OP:NHOMO 327 OP:NHOMOORG 172 OP:PATTERN -------------------------------------------------------------------- 1-1-4---------41222-23113122222232222-12-321-----1----------12--215A371----------------------------------2--------------------------------------3-12--11--------------32152----------------------2-----1-1----11---1121--2---1---------2----------------------------------------------------1--11-------------------------------------1-----------2-33-------1------111------------------------------2----2-----------------2-1--------111---------2----------------------------------------------------------------------1212-32211----6666161--1-1-----1-----1---1-------------------1----------11-------------------31----------------------------------1----------1--------------------------3-2-------2-221---------1-11-11--------1---11----------------1---------122222111121---------------3-1-------------------------1345452311-1111-421-------------1---------------------------------------------------------------------------------1- ---------------------------------1-1--------------------------------------------------------------------------4221112----------2---------------------------1--------1--------------------------------11 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 238 STR:RPRED 94.8 SQ:SECSTR #####ccccEEEccccccccEEEEEccTTccGGGGHHHHHHTTTTcEEEEEcccccTTHHHHHHHHHHHHHHHHHHHHHHHTHHcccccEEEEEETHHHHHHHHHHHHHHHTTccEEEEEEEccccccccccccccHHHHHHHTHHHHHHHHHHHHcccccccccEEEEEEccccccccTTTGGGccGccEEEEEccccGGGcccTTHHHHHHHHcTTEEEEEETTccTTHHHHcHHHHHHHH######## DISOP:02AL 1-4| PSIPRED cccccccEEEccccccccccEEEEEEcccccHHHHHHHHHHcccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEEEcHHHHHHHHHHHHHHHccccEEEEEEEcccccccccccccccccHHHHHHHHHHcccccHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEcccccccHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHHHHccc //