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Nocardia farcinica IFM 10152 (nfar0)
Gene : nbtB
DDBJ      :nbtB         putative polyketide synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  851/915 : Eukaryota  182/199 : Viruses  0/175   --->[See Alignment]
c.1.19c.95.1
:436 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->425 2qo3B PDBj 4e-90 42.0 %
:RPS:PDB   2->425 2c9hA PDBj 5e-62 25.4 %
:RPS:PDB   396->435 3c5oB PDBj 2e-05 22.5 %
:RPS:SCOP  1->432 1e1cA1  c.1.19.1 * 2e-58 10.8 %
:HMM:SCOP  5->427 1tedA_ c.95.1.2 * 5.7e-80 42.3 %
:RPS:PFM   8->251 PF00109 * ketoacyl-synt 7e-39 48.1 %
:RPS:PFM   268->354 PF02801 * Ketoacyl-synt_C 8e-16 48.3 %
:HMM:PFM   6->255 PF00109 * ketoacyl-synt 5.1e-77 46.3 244/253  
:HMM:PFM   263->377 PF02801 * Ketoacyl-synt_C 1.2e-34 48.7 115/119  
:BLT:SWISS 1->434 ERYA2_SACER 5e-93 42.4 %
:PROS 168->184|PS00606|B_KETOACYL_SYNTHASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55609.1 GT:GENE nbtB GT:PRODUCT putative polyketide synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 823100..824410 GB:FROM 823100 GB:TO 824410 GB:DIRECTION + GB:GENE nbtB GB:PRODUCT putative polyketide synthase GB:PROTEIN_ID BAD55609.1 LENGTH 436 SQ:AASEQ MSAADDPIVIVGMGVEAPGGVETLPQYWSALASATELIGPFPRDREWPLAEIFALGRREGWSPVRDAGGFLTGATEFDAMFFGITPREAVAMDPQQRVGMRVAWRALEHAGLNPAGLDGASVGCYMGVSMIEYGPRASAVNDYSGFRATGTALGAVAGRISHALGLIGPSVSVDTACASSLTAVHQAAAAIRAGECDWALAGGVCVMGTPGAFYEFSKNNALATDGHCRPYAADATGTLWGEGAGVVVLERQSRALAQGHRIYGQLLGSRINHNGKGAPLAVPNATAQERLVRDTLAVAGIEPELVGLVEGHGTGTPVGDPLELTALGATYGAPGANTLLGSVKSNVGHAQAASGMLGLIKLLLCGLHGEIAPTLWADRPTAEVDWDATTLRLAAQAQPWKPIDGVRYGAVSSFGVAGTNAHAIVAMPVLEEDSDV GT:EXON 1|1-436:0| BL:SWS:NREP 1 BL:SWS:REP 1->434|ERYA2_SACER|5e-93|42.4|434/3567| PROS 168->184|PS00606|B_KETOACYL_SYNTHASE|PDOC00529| SEG 355->369|gmlgliklllcglhg| BL:PDB:NREP 1 BL:PDB:REP 6->425|2qo3B|4e-90|42.0|417/873| RP:PDB:NREP 2 RP:PDB:REP 2->425|2c9hA|5e-62|25.4|405/426| RP:PDB:REP 396->435|3c5oB|2e-05|22.5|40/152| RP:PFM:NREP 2 RP:PFM:REP 8->251|PF00109|7e-39|48.1|235/245|ketoacyl-synt| RP:PFM:REP 268->354|PF02801|8e-16|48.3|87/118|Ketoacyl-synt_C| HM:PFM:NREP 2 HM:PFM:REP 6->255|PF00109|5.1e-77|46.3|244/253|ketoacyl-synt| HM:PFM:REP 263->377|PF02801|1.2e-34|48.7|115/119|Ketoacyl-synt_C| RP:SCP:NREP 1 RP:SCP:REP 1->432|1e1cA1|2e-58|10.8|399/559|c.1.19.1| HM:SCP:REP 5->427|1tedA_|5.7e-80|42.3|355/0|c.95.1.2|1/1|Thiolase-like| OP:NHOMO 4214 OP:NHOMOORG 1033 OP:PATTERN -------------------------------------------------------------------- 2371I1211111-1CCCJJ-JCBBS7JIJJJDECBC53462NAM111-121113211311MF21W3RXDT1--------1112111111113111111-125322G54241111111111111111111211111122255111J346456791111222211321CDCW51111111111111111111121N1111111121111111211471121114111111111A3111111111111111111112-111111-1-1111111111111-122211111241111111111111111111111111111111111111431111111111L1551111112--1211211311111111111111316222233333754333324633333333333333-446465444722566844655555485315343333344111111111332121311111111111111111111111111111-211112221443332ED99B83345FFFF2I543121312347113323235531321223311122221223114143251243142221343522A463313YL3313-1111111111111111111111222322264223465655566665666666561-12221111---B2932432449288322-422222323343522222433483B9322222222222222224223222221745555444454--2335333766732A3511113111111122111331122212823247C66252621879311111111234461222223644333232233311112111--1111--------1-1-------------------------1111111111181 1152ft3-311-1128DO8VGJMYjUW112443LME7BBBA9B444MJENGGEFBAURF88811111--111111-11-11111111--163D112------4111-1C3O544431222122241221292-2231221222411212-31152632222229918547A5487234K*73IDK8459L47324122r ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 435 STR:RPRED 99.8 SQ:SECSTR TccccccEEEEEEEEEETTEETcHHHHHHHHHTTcccEEEcccGGGTTccccEEcEEEEccEcccEcccccccTTcccGGGTHccTTHHHHccHHHHHHHHHHHHHHHHHTcccccHHHHHEEEEEEEccccHHHHHHcGGGccTTHHHHHcTTHHHHHHHHHHTccccEEccccGGGHHHHHHHHHHHHHHHTcccEEEEEEEEccccHHHHHHHHHTTccccTTcccTTcTTccccccccEEEEEEEEEHHHHHHHTccccEEEEEEEEEEcccccccccTTcHHHHHHHHHHHHHHTccGGGEEEEEccccccHHHHHHHHHHHHHHHGGGGGTcEEEccHHHHcccGGGHHHHHHHHHHHHHHHTEEcccTTcccccTTccccGcccccccccEEccccccccEEEEEEEETTTEEEEEEEHEcEEEEEET# DISOP:02AL 1-3, 429-436| PSIPRED cccccccEEEEEEEEEcccccccHHHHHHHHHccccccccccHHHccccccccccccccccccEEEEccccccHHHccHHHHcccHHHHHHccHHHHHHHHHHHHHHHHccccHHHcccccEEEEEEcccccHHHHHccccccccccHHHHHHHHHHHHHHHHHcccccEEEHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHcccccccccccccccccccEEEEcEEEEEEEEcHHHHHHcccEEEEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHcccHHHccEEEEEcccccccHHHHHHHHHHHHcccccccEEEcccHHHHHHHHHHHHHHHHHHHHHHHccEEcccccccccccccccccccEEEccccccccccccEEEEEEEcccHHcEEEEEEEEcccccccccc //