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Nocardia farcinica IFM 10152 (nfar0)
Gene : nbtC
DDBJ      :nbtC         putative polyketide synthase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  314/915 : Eukaryota  82/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.28.1c.1.19c.19.1c.2.1c.72.3
:1028 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->438 2hg4F PDBj 4e-34 31.1 %
:BLT:PDB   583->888 2fr0A PDBj 3e-19 27.4 %
:RPS:PDB   7->115 3c5oB PDBj 1e-09 8.2 %
:RPS:PDB   96->386 2c2nA PDBj 2e-37 19.6 %
:RPS:PDB   685->844 1dohB PDBj 3e-11 14.6 %
:RPS:PDB   840->970 2ec5A PDBj 2e-07 4.8 %
:RPS:PDB   948->1027 2cnrA PDBj 7e-08 11.2 %
:RPS:SCOP  12->80 1e1cA1  c.1.19.1 * 9e-05 21.0 %
:RPS:SCOP  98->345 1nm2A1  c.19.1.1 * 4e-30 18.5 %
:RPS:SCOP  574->668 2fr0A2  c.2.1.2 * 2e-13 29.5 %
:RPS:SCOP  685->832 1u7uA  c.72.3.1 * 5e-09 8.2 %
:RPS:SCOP  825->904 2g7gA2  a.121.1.1 * 4e-10 17.9 %
:RPS:SCOP  944->1010 1vkuA  a.28.1.1 * 3e-07 17.2 %
:HMM:SCOP  97->386 1mlaA1 c.19.1.1 * 1.3e-43 34.1 %
:HMM:SCOP  475->673 2fr1A2 c.2.1.2 * 2e-19 32.3 %
:HMM:SCOP  683->888 2fr1A1 c.2.1.2 * 2.2e-26 28.3 %
:HMM:SCOP  947->1026 1klpA_ a.28.1.1 * 1e-09 29.1 %
:RPS:PFM   100->378 PF00698 * Acyl_transf_1 9e-27 35.9 %
:RPS:PFM   686->859 PF08659 * KR 1e-17 38.7 %
:HMM:PFM   100->427 PF00698 * Acyl_transf_1 4e-59 30.0 313/318  
:HMM:PFM   685->859 PF08659 * KR 2.6e-38 37.9 174/181  
:HMM:PFM   962->1022 PF00550 * PP-binding 2.2e-08 30.0 60/67  
:BLT:SWISS 9->438,576->1010 ERYA3_SACER 3e-44 32.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55610.1 GT:GENE nbtC GT:PRODUCT putative polyketide synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 824403..827489 GB:FROM 824403 GB:TO 827489 GB:DIRECTION + GB:GENE nbtC GB:PRODUCT putative polyketide synthase GB:PROTEIN_ID BAD55610.1 LENGTH 1028 SQ:AASEQ MSSYLLPDGTVPVLISSDTADGVRAEAAAVLAYLDEHPRVSPERVAEMLFRTRVARRYRALAMVRTREELLDGLRAVVADTPSRVVVTGDGAASARRIGFVFPGQGSQRPGMGRLYYDVSDAYRAAVDACAAIHRERFEHDQPLHYLLGDEGRYQDTVWEVQPALMFHMYGLAAMWRAAGVEPAATVGHSQGELAAGAVSAVMTLRDSVLAVTHRARLVERISPRGYSMAVLGMDREECEALLARHSGWAELSVVNAPHILAISGDRDTIVDMVELATARGQFAREIKVSYPAHTSIVAELREHFMSFLGDEMSGECFTASEIPCYGATLGAAITPDLTHRDYWYWNLRNRVRFDRAVVAAVTDGVDTLIEVAEHPVLQLALQENLTLVPREKLPLGRDVKVLGTSLRTAEGLAEFTRNLATIAVHDLDYRWDALRTDDGAAPRPPLRDFPHTIMHPRRLWAGPDLPAAEPQPDAAPAPERLVETWIPLDKRSMLAPRTLAVVDHTGRCAELADALVAAADRHGATATVLDAAALAGDLPEFDTAVVLLPELPDTDGAAALDDFAAFFADRTWVPALDRLGPGGQCWLVTTGGESVLADDPVPHLFHGAVAAGYRSAGIERPGILLRHLDLAAGAGPDQAARIVTAVHTAGECELALRGGKLYVKRLVVDPATDASAADTDLSHVLIVGGTGQLGLRFCEHFAHAGAGRVTLVSRSGETERVAGELNRLRRLGGTEIVVEACDVSDAEAVKRFAATIESAPVSLLIHAAVNYVDAELPDITAEMVTEAAGSKVLGLGTVLDIVPFTEQQRILLCSSTAATLSGRGQILYAVTNRMLDILARRLRAQGRDAISIEWGLWSVAGPLDEAGFARVADAGVHPMAPRDAITAGLAGPWGDAMIMSADWAFLREVLDTFGQGSVLPEIATPAAASAPEPDVAEPVVTEQPAAPAADRPLAERMLTQLHKVMGTDGSESIDGSVPLVALGLDSLQALDFRKRVKAELDRDLPVAAILGGASLDDVVALMAENTN GT:EXON 1|1-1028:0| BL:SWS:NREP 1 BL:SWS:REP 9->438,576->1010|ERYA3_SACER|3e-44|32.2|826/3172| SEG 122->132|ayraavdacaa| SEG 349->362|rnrvrfdravvaav| SEG 464->480|pdlpaaepqpdaapape| SEG 510->521|aeladalvaaad| SEG 524->538|gatatvldaaalagd| SEG 558->570|aaalddfaaffad| SEG 670->681|dpatdasaadtd| BL:PDB:NREP 2 BL:PDB:REP 8->438|2hg4F|4e-34|31.1|409/859| BL:PDB:REP 583->888|2fr0A|3e-19|27.4|303/468| RP:PDB:NREP 5 RP:PDB:REP 7->115|3c5oB|1e-09|8.2|85/152| RP:PDB:REP 96->386|2c2nA|2e-37|19.6|281/317| RP:PDB:REP 685->844|1dohB|3e-11|14.6|157/271| RP:PDB:REP 840->970|2ec5A|2e-07|4.8|126/711| RP:PDB:REP 948->1027|2cnrA|7e-08|11.2|80/82| RP:PFM:NREP 2 RP:PFM:REP 100->378|PF00698|9e-27|35.9|262/297|Acyl_transf_1| RP:PFM:REP 686->859|PF08659|1e-17|38.7|173/181|KR| HM:PFM:NREP 3 HM:PFM:REP 100->427|PF00698|4e-59|30.0|313/318|Acyl_transf_1| HM:PFM:REP 685->859|PF08659|2.6e-38|37.9|174/181|KR| HM:PFM:REP 962->1022|PF00550|2.2e-08|30.0|60/67|PP-binding| RP:SCP:NREP 6 RP:SCP:REP 12->80|1e1cA1|9e-05|21.0|62/559|c.1.19.1| RP:SCP:REP 98->345|1nm2A1|4e-30|18.5|227/243|c.19.1.1| RP:SCP:REP 574->668|2fr0A2|2e-13|29.5|95/209|c.2.1.2| RP:SCP:REP 685->832|1u7uA|5e-09|8.2|146/198|c.72.3.1| RP:SCP:REP 825->904|2g7gA2|4e-10|17.9|78/132|a.121.1.1| RP:SCP:REP 944->1010|1vkuA|3e-07|17.2|64/85|a.28.1.1| HM:SCP:REP 97->386|1mlaA1|1.3e-43|34.1|217/0|c.19.1.1|1/1|FabD/lysophospholipase-like| HM:SCP:REP 475->673|2fr1A2|2e-19|32.3|198/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 683->888|2fr1A1|2.2e-26|28.3|205/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 947->1026|1klpA_|1e-09|29.1|79/115|a.28.1.1|1/1|ACP-like| OP:NHOMO 1264 OP:NHOMOORG 396 OP:PATTERN -------------------------------------------------------------------- 31--6-111111-1699HH-H999Q5HGHHHBA8784223-E29----------------D7--M-FK6J-----------1-11111----1------1--------11---------------1--1-1111-1---11---C-2521445----------1--386N3-------------------1-16--------2------111142--211111-1------2----------------1111------------------------1-----1111--1111111111111111111111111-11---111-1112-1111111-1-5122------2------1--1---1-11111--11-22---------22------13---------------1131211111---223--1---2113-1---1-----11---------11--1--------------------------------------11-112222763332111244442311-1-1----12--1--11--2-12--------------211----1-----2----------1----1----N6------1-----------------1--11-1---2----------1------1-------------------4-1-------2-331---------1-11-11--------12132----------------------------11111-11-1----1111112112-12-1---------------222221----11---12111--11--3211------------1111111--------1-------------------------------------------------------11--------15- --22221--------56819689CIDH111111BF64213233232797E966655DD5333----------------------------9161-1------1-----11J42112--------1-----1----------------------2-2-1-1---31------213----211---1----8--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 896 STR:RPRED 87.2 SQ:SECSTR ######EcTTccEEEEEEEEEEETTccEEEEEccHHHHHHHHHcTTcccccccHHHHHHHHHHTTccccHHHHHHHHHHHHTTHHHHEETcHHEEccEEEEEccTTcccTTTTTTTTTcTTHHHHHHHHHHHHcccHHHHHHHHcccHccHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHTEEEEEEcTTHHHHHHHHTTcccHHHHHHHHHHHHHHHHHHHHTccEEEEEccTTccHHHHHHHHHHHHEEEEEEETTEEEEEEEHHHHHHHHHTGGGGTcEEEEccccccTTcGGGGGGHHHHHHHHccEEHTccccccccEEEcTTTccccccGGGHHHHHHHHTEHHHHHHHHTcccTTccccEEEEEccccHHHHHHHHHcTTcEEEEcccHHHEccHHHHHHHHHHHcEEEccccEEETTTTccEEEEccccccccccTTccccEEEEEE#TTcc#########################################################################################################################cccEEEEE###EccccccTcccGGGHHHHHHHHHHHHHcTTTEEEEEEEcTTccHHHHccHHHHHcccTTccccccccccccccEEEEEEEGGGGGGccTTEEEETTTTcHHHHHHHHHHHHTTcEEEEEEEcccTcHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHcccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHccTTcEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHTTcccEEEEEEEcccccHHHHHHHcccccccccHHHHHHHHHHHHTTccEEEEcccHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHHHHHcHHHHcccHHHHHHHHHHHHHHHccccTTTccTTccTTTTccccHHHHHHHHHHHHGGGTccccGGGGGTcccHHHHHHHHHHcc# DISOP:02AL 1-2, 926-948, 1027-1028| PSIPRED ccccccccccEEEEEEcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccEEEEEccHHHHHHHHHHHHHHccccEEEEcccccccccEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHccccEEEEEEEcccEEEEEccHHHHHHHHHHHHHcccEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHHHccccccccEEEEEEccccccHHHHHHHHHHHHHHcccccccHHcccccccccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEcccEEcccccccccHHHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHccccccEEEEEccEEEEEEEEEccccccccccccccEEEEEccHHHHHHHHHHHHHHccccEEEEEEcccccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHccccccEEEEccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcHHHHcccccHHHHHHHHHHHHHHHHHHHHccccEEEEEEEEccccccccHHHHHHHHHHHHccccHHHHHHHHHHcccccEEEccHHHHHHHHHHHHHcccccHHHHHcccccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccHHcccccccHHHHcHHHHHHHHHHHHHHHHHcccccHHHHHccccHHHHHHHHHHHcc //