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Nocardia farcinica IFM 10152 (nfar0)
Gene : nbtF
DDBJ      :nbtF         putative non-ribosomal peptide synthetase
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  656/915 : Eukaryota  175/199 : Viruses  0/175   --->[See Alignment]
a.28.1c.43.1e.23.1
:1167 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   19->441 2jgpA PDBj 2e-11 21.1 %
:BLT:PDB   643->1141 2vsqA PDBj 4e-47 28.6 %
:RPS:PDB   3->83 2afdA PDBj 9e-07 20.7 %
:RPS:PDB   112->524 3b30A PDBj 2e-44 9.3 %
:RPS:PDB   563->1056 3e7wA PDBj 2e-52 22.1 %
:RPS:PDB   1064->1138 2afdA PDBj 2e-12 28.4 %
:RPS:SCOP  17->71 1vkuA  a.28.1.1 * 3e-07 14.3 %
:RPS:SCOP  114->294 1l5aA1  c.43.1.2 * 3e-15 13.3 %
:RPS:SCOP  289->526 1l5aA2  c.43.1.2 * 4e-31 15.0 %
:RPS:SCOP  556->1054 1md9A  e.23.1.1 * 4e-47 22.8 %
:RPS:SCOP  1064->1136 1dnyA  a.28.1.2 * 1e-18 40.3 %
:HMM:SCOP  9->126 1klpA_ a.28.1.1 * 1.1e-14 27.4 %
:HMM:SCOP  105->303 1q9jA1 c.43.1.2 * 1.4e-27 29.2 %
:HMM:SCOP  289->552 1l5aA2 c.43.1.2 * 1.4e-38 24.3 %
:HMM:SCOP  527->1077 1pg4A_ e.23.1.1 * 4.7e-138 33.6 %
:HMM:SCOP  1061->1137 1dnyA_ a.28.1.2 * 1.7e-15 50.0 %
:RPS:PFM   112->404 PF00668 * Condensation 5e-19 30.6 %
:RPS:PFM   426->482 PF08415 * NRPS 8e-09 54.4 %
:RPS:PFM   682->976 PF00501 * AMP-binding 1e-34 37.2 %
:RPS:PFM   1070->1132 PF00550 * PP-binding 4e-05 45.2 %
:HMM:PFM   593->986 PF00501 * AMP-binding 1.3e-103 34.6 390/418  
:HMM:PFM   111->403 PF00668 * Condensation 4.4e-51 27.1 292/301  
:HMM:PFM   18->82 PF00550 * PP-binding 6.8e-13 29.2 65/67  
:HMM:PFM   1071->1134 PF00550 * PP-binding 6.8e-14 39.7 63/67  
:HMM:PFM   426->482 PF08415 * NRPS 1.9e-21 49.1 57/58  
:BLT:SWISS 20->1167 MBTB_MYCSS 0.0 47.7 %
:PROS 1093->1108|PS00012|PHOSPHOPANTETHEINE
:PROS 708->719|PS00455|AMP_BINDING
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55613.1 GT:GENE nbtF GT:PRODUCT putative non-ribosomal peptide synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 837186..840689 GB:FROM 837186 GB:TO 840689 GB:DIRECTION + GB:GENE nbtF GB:PRODUCT putative non-ribosomal peptide synthetase GB:PROTEIN_ID BAD55613.1 LENGTH 1167 SQ:AASEQ MESAQQRGDAATAGIGKDEVRAAIAAQLGLAVEDIADGDDLIQLGLDSIRTMKLAGGWRKRGVDVNFAQLAAEPTVEAWYALLGAGDGAEPVAAEEPAGQQAAADADESAPFPLATMQHAYWIGRSGEQELGGVAAHLYVEFDGGRIDPARLEKAVADLVAAHPMLRTRFLPDGTQQTMPAPGKPVFSVVDLRDRDADATEAALADLREQKTHQLLDIEAGQVIDITLTLRDENSTRLHLDVDMLAGDAMSYRVLISDLADLYHGATLPTPGYSYRRYRTERQIDEAARERDRRWWQERLPELPGAPELPTVPVAERTDPHRTVRYNHWLAPEAKQRLLAAAHERGITPAMALAAVFAEVIGGWSAQSRFLLNVPLFHREPVHPDIDRVIGDFTSSIMLEVDVTENMTVADRARALQRSMHDSGAHTAYSGLEVLRDLGRHRGEPVLAPVVYTSALNLGELFADKVTETFGEPVWIISQGPQVLLDAQVTEVRGGLLLNWDVRESAFPDGMIEAMFACYTEAIGRLGEGEAGWQAEAAVRLPRAQAEVRAAVNATDGPVSGRCLHEGFFTRAAANPDATAVVWGIGADEGRWTYGELAGQALAVAGALRAEGVGRGDAVAVQLPKGRDQILAVLGVLAAGATYVPIGFDQPVGRRAEILRTGDIVAALTVPGADLGVPIPTLSIDAARAYPAPLDAPDIPPTSEIAYVIFTSGSTGVPKGVDVPHSGAMNTIDAVNDWFEVGSADRVLALSALEFDASVYDIFGMFAVGGSIVAVDAERRAEATTWVDLLRHHRVTILNCVPSMLDMILEIGGDELGDSLRAVTLGGDWVGADLARRLARQVPGCRFSGLGGATETSIHNTICEVVGEPPAHWATVPFGVPLRNVRCRVVSQAGRDCPDWVPGEFWVGGANVAAGYRNDPERTAERFVEHDGMRWYKTGDMARYWPDGTIEFLGRADHQVQIRGYRVELGEVESALRTVPGVRHAVAAVVGAGAPKLVAAVAGERGEIGDITGAVAHLLPAYMIPTRIEYLDQMPLTANGKLDRRAVVALLEPRVDGEDVDGSPRDDVEAALADIVAGVLGVESVGVHDDFFGMGGDSVLATTVIARIREWLDLDHALVADLFASRTIAALATRLAERESDPNRLTEVARMYLEVSAMTDEEILAQM GT:EXON 1|1-1167:0| BL:SWS:NREP 1 BL:SWS:REP 20->1167|MBTB_MYCSS|0.0|47.7|1125/1167| PROS 1093->1108|PS00012|PHOSPHOPANTETHEINE|PDOC00012| PROS 708->719|PS00455|AMP_BINDING|PDOC00427| SEG 84->111|gagdgaepvaaeepagqqaaadadesap| SEG 191->209|dlrdrdadateaaladlre| SEG 527->538|gegeagwqaeaa| SEG 595->616|gelagqalavagalraegvgrg| SEG 631->641|lavlgvlaaga| SEG 979->1003|vpgvrhavaavvgagapklvaavag| BL:PDB:NREP 2 BL:PDB:REP 19->441|2jgpA|2e-11|21.1|402/520| BL:PDB:REP 643->1141|2vsqA|4e-47|28.6|489/1273| RP:PDB:NREP 4 RP:PDB:REP 3->83|2afdA|9e-07|20.7|81/88| RP:PDB:REP 112->524|3b30A|2e-44|9.3|410/446| RP:PDB:REP 563->1056|3e7wA|2e-52|22.1|489/508| RP:PDB:REP 1064->1138|2afdA|2e-12|28.4|74/88| RP:PFM:NREP 4 RP:PFM:REP 112->404|PF00668|5e-19|30.6|284/297|Condensation| RP:PFM:REP 426->482|PF08415|8e-09|54.4|57/58|NRPS| RP:PFM:REP 682->976|PF00501|1e-34|37.2|282/405|AMP-binding| RP:PFM:REP 1070->1132|PF00550|4e-05|45.2|62/67|PP-binding| HM:PFM:NREP 5 HM:PFM:REP 593->986|PF00501|1.3e-103|34.6|390/418|AMP-binding| HM:PFM:REP 111->403|PF00668|4.4e-51|27.1|292/301|Condensation| HM:PFM:REP 18->82|PF00550|6.8e-13|29.2|65/67|PP-binding| HM:PFM:REP 1071->1134|PF00550|6.8e-14|39.7|63/67|PP-binding| HM:PFM:REP 426->482|PF08415|1.9e-21|49.1|57/58|NRPS| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| GO:PFM GO:0048037|"GO:cofactor binding"|PF00550|IPR006163| RP:SCP:NREP 5 RP:SCP:REP 17->71|1vkuA|3e-07|14.3|55/85|a.28.1.1| RP:SCP:REP 114->294|1l5aA1|3e-15|13.3|165/174|c.43.1.2| RP:SCP:REP 289->526|1l5aA2|4e-31|15.0|227/250|c.43.1.2| RP:SCP:REP 556->1054|1md9A|4e-47|22.8|482/536|e.23.1.1| RP:SCP:REP 1064->1136|1dnyA|1e-18|40.3|72/76|a.28.1.2| HM:SCP:REP 9->126|1klpA_|1.1e-14|27.4|113/115|a.28.1.1|1/2|ACP-like| HM:SCP:REP 105->303|1q9jA1|1.4e-27|29.2|168/175|c.43.1.2|1/1|CoA-dependent acyltransferases| HM:SCP:REP 289->552|1l5aA2|1.4e-38|24.3|247/0|c.43.1.2|1/1|CoA-dependent acyltransferases| HM:SCP:REP 527->1077|1pg4A_|4.7e-138|33.6|545/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| HM:SCP:REP 1061->1137|1dnyA_|1.7e-15|50.0|76/76|a.28.1.2|2/2|ACP-like| OP:NHOMO 4986 OP:NHOMOORG 867 OP:PATTERN 11----1554445432--2122145222-1-31-------1-13-53511312--------------- 2231Q552223845HQF77-7F44QL777779HGIHJQpg1NAL2--2153-557446--NL52aBRRHS6--------1657-----3311-1--1----8--1F---211111111-111111--1-1------322A9---Y159B-CCD-------------2J9T2-------1----22132--172L55656A4967678A4-199AH57C469951-111111S2144444444433444222112111111212113111111121-111111113115411111111111111111111111111112211121---41111511112G277------32-5112-883-41--121111---5-32446-----56A7H-24EJI9A21211121231-44444836397-588A2421154449252559-111547--------21--1533------------------------------56H5-398588ACBEEIFIID667AVWWVCNG7IGGPF1154924A42D338FB--3----61-------215743-B722123551221-37423-3263434XC231--1-222212-1-------1---31157-2143132-1111172-11113111111---1311------D2H8321333B3AA532-235333535535533333232598RQ3323233333332322352323332--254545322242---213121443343O29111-21-11--2111666A6-3--2A4DGBENHGE4A9B92GHM1-1111-1--11182233252-2223534332221111---------------------------------------------------------71 ----1-3-----438FGLCMJVPVXScCCFEADLMKECBCBCC889F9FYPKLME9LHA766111211-111111-1-1111111122-AC3GA922222327647-25292314241121-3263-3-7K3-12612112-232221113112146353434C4B3B8925697---2E3133-DCEQLD6312521A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1130 STR:RPRED 96.8 SQ:SECSTR ##ccccccccccHHHHHHHHHHHHHHHHTccGGGccTTccGGGTTcccTHHHHHHHHHHHHTccccGGGTTTcccHHHHHHHHHHccTTcTTcccccccccc#########EEccGGGGcHHHHTcTEcEEEEEEEEEcccGGGHHHHHHHHHHHHHHHHHHcGGGGcEEEEEcEEEEEccccccEEEEEEcTTcTTcccHHHHHHHTccGGGccccTTccTTcccccEEEEcTEEEEEEEEETTTccHHHHHHHHHHHHHHHHTccccHHHHHHTTcccTTcccccTTccccGGGTTccccTTccccTccEEEEEEEEcHHHHHHHHHHHHTTccTTcccccHHHHHHHHHHHHHHHHHTTTccTTcEEEEEEEEEcHHHTccTTcccccEEEEEEEEEHHHHHHccHHHHHHHHHTTccHHHHHHHHHHHHHHHHHccccTTccTTTcEEEEEcTTccGGGccTTcccccccEEEcccccTEEEEccccTTccEEEEEEEEHHHHHHHHHcHHHHTTcEEccTHHHHTTccccccccccTTTHHHHcEEccccccccccccHHHHHHHHHHHcTTcEEEEETETTTTEEEEHHHHHHHHHHHHHHHTTTcccccccEEEEEcccHHHHHHHHHHHHHTccEEEEETTccHHHHHHHHHHHTccEEEEcccccTTcccccccEEEHHHHHTcccccccccTTcEEEEEEEccTTcccEEEEEEHHHHHHHHHHHHHHcTTTTTcEEEEcccTTcTHHHHHHHHHHHTTcEEEEccHHHHHcHHHHHHHHHHHcccEEEEcHHHHHHHHTcTcTTTcTTccEEEEccccccHHHHHHHHHHcTTcEEEEccccGGGccccEEEEEcHHHHTTcccccccEEcTTcEEEEEcTTcccccTTccEEEEEEcTTcccccTTcHHHHHHHEEEEccccEEEEEEEEEEEETTEEEEEEEcccEEEETTEEEEHHHHHHHHHHEEEcccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHccGGGcccEEEEcccccccTTccccHHHHHHHHHHHHTTEEEEEEcGGGHHHHHcGGGHHHHHHHHHccEEEEEcHHHHHTccccccccccccccGGGGGGcTTccHHHHHHHTTTEEccccc########################## DISOP:02AL 1-3, 5-13, 1057-1061, 1135-1152| PSIPRED cccccccccccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHcccEEEHHHHHccccHHHHHHHHHHHHHHcccHHHHHHHHHHccccccccEEcccHHHHHHHHHHHcccccccEEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEcccEEEEEEcccccEEEEEcccccHHHHHHHHHHHHHHHHHccccccccccEEEEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEEEEcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHcEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccEEEEEEcccccHHccccccccccccccccccccccEEEEEEEEcccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHcccEEEEEcccccccEEcHHHHHHHHHHHHHHHHHHccccccEEEEEEcccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEcccccccccccEEEEcccccccccccccccccccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHcccccccEEEEHHHHHHHHHHHHHHHHHHHccEEEEcccHHcccHHHHHHHHHHccccEEEccHHHHHHHHHcccccccccccEEEEEcccccHHHHHHHHHHccccEEEEccccccHHHcEEEEEcccccccccccccccEEccccEEEEEcccccccccccEEEEEEcccHHHHcccccHHHHHHHHcccccccEEEEccEEEEccccEEEEEEccccEEEEccEEEcHHHHHHHHHHcccccEEEEEEEcccccEEEEEEccccccHHHHHHHHHHHccHHccccEEEEcccccccccccccHHHHccccHHHHcccccccccccHHHHHHHHHHHHHHccccccccccHHHHccHHHHHHHHHHHHHHHHcccccHHHHHHccccHHHHHHHHHHccccccccccccHHHHHHccccHHHHHHHc //