[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : nuoA
DDBJ      :nuoA         putative NADH dehydrogenase I chain A
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  485/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
:126 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   22->125 PF00507 * Oxidored_q4 2e-18 45.3 %
:HMM:PFM   17->125 PF00507 * Oxidored_q4 2.2e-29 39.0 100/102  
:BLT:SWISS 29->126 NUOA_MYCTU 1e-38 70.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57514.1 GT:GENE nuoA GT:PRODUCT putative NADH dehydrogenase I chain A GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2836112..2836492) GB:FROM 2836112 GB:TO 2836492 GB:DIRECTION - GB:GENE nuoA GB:PRODUCT putative NADH dehydrogenase I chain A GB:PROTEIN_ID BAD57514.1 LENGTH 126 SQ:AASEQ MNLETPTLVLGALAGAFAVFSIVLSALVGPKRYNRAKLEAYECGIEPTPHAVAGGPGNATGQRFPVKYYLTAMLFIIFDIEIVFLYPWAVHFDALGLFGLVAMALFIVNVSIAYAYEWRRGGLSWD GT:EXON 1|1-126:0| BL:SWS:NREP 1 BL:SWS:REP 29->126|NUOA_MYCTU|1e-38|70.4|98/128| TM:NTM 3 TM:REGION 7->29| TM:REGION 66->88| TM:REGION 93->114| SEG 8->20|lvlgalagafavf| RP:PFM:NREP 1 RP:PFM:REP 22->125|PF00507|2e-18|45.3|95/108|Oxidored_q4| HM:PFM:NREP 1 HM:PFM:REP 17->125|PF00507|2.2e-29|39.0|100/102|Oxidored_q4| GO:PFM:NREP 2 GO:PFM GO:0008137|"GO:NADH dehydrogenase (ubiquinone) activity"|PF00507|IPR000440| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00507|IPR000440| OP:NHOMO 552 OP:NHOMOORG 507 OP:PATTERN ------------------------1111-1-1----------------11111--------------- 12211---------11111-11--11111111111111111111-1--1-----------11111112231-----------211---11111------1-11--21111--------------1111111111212222211121111111111111111111111111111111111111111111----1-111111111111111------1-1111----------11----------------------------------------------------------------------------------------------1-----------------------2--1-1111----11-------12-111111111111111111122111111111111-11111121111111112221112211111111111111111111111211-11111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111211111111112111--------111----222111213111112-211111-----111111111111-11111-1---------------------1--------2111----------------------------------------------1--11------------------------1--111111111111-111111111111--1----------------1111111--11-22221-1111111-1111111111111--------------11111111111111111-111111------------------------------------------------1 ---------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------1-111------1-3-2-12--1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 30-38| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccc //