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Nocardia farcinica IFM 10152 (nfar0)
Gene : nuoE
DDBJ      :nuoE         putative NADH dehydrogenase I chain E
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  541/915 : Eukaryota  171/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:245 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->162 3iam2 PDBj 8e-26 42.9 %
:RPS:PDB   97->177 2auvA PDBj 9e-21 33.3 %
:RPS:SCOP  36->183 2fug21  c.47.1.21 * 5e-33 41.2 %
:HMM:SCOP  28->202 2fug21 c.47.1.21 * 3.7e-50 45.7 %
:RPS:PFM   38->177 PF01257 * Complex1_24kDa 2e-40 52.9 %
:HMM:PFM   36->179 PF01257 * Complex1_24kDa 5e-54 54.2 144/145  
:BLT:SWISS 21->237 NUOE_MYCTU 4e-89 69.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD57510.1 GT:GENE nuoE GT:PRODUCT putative NADH dehydrogenase I chain E GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(2832656..2833393) GB:FROM 2832656 GB:TO 2833393 GB:DIRECTION - GB:GENE nuoE GB:PRODUCT putative NADH dehydrogenase I chain E GB:PROTEIN_ID BAD57510.1 LENGTH 245 SQ:AASEQ MSDRQTGDGHAPILLQLSTRPEPYPPSVRERLALDAKEIIGRYPQPRSALLPLLHLVQSEDGYVTATGIEFCAEQLGLTGAEVTAVATFYSMFRRTPTGDYHVGVCTNTLCAVLGGDAILASLTEHLGIAAGETTADGAITVEHIECNAACDFAPVVMVNWEFFDNQTPESARALVDALRAGEPVRPSRGAPLCTFRETARLLAGFPDERPGALDGAAGHATLAGLEIARDRNMTAPQPDSGELR GT:EXON 1|1-245:0| BL:SWS:NREP 1 BL:SWS:REP 21->237|NUOE_MYCTU|4e-89|69.1|217/252| BL:PDB:NREP 1 BL:PDB:REP 37->162|3iam2|8e-26|42.9|126/179| RP:PDB:NREP 1 RP:PDB:REP 97->177|2auvA|9e-21|33.3|81/85| RP:PFM:NREP 1 RP:PFM:REP 38->177|PF01257|2e-40|52.9|140/142|Complex1_24kDa| HM:PFM:NREP 1 HM:PFM:REP 36->179|PF01257|5e-54|54.2|144/145|Complex1_24kDa| GO:PFM:NREP 3 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01257|IPR002023| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF01257|IPR002023| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01257|IPR002023| RP:SCP:NREP 1 RP:SCP:REP 36->183|2fug21|5e-33|41.2|148/178|c.47.1.21| HM:SCP:REP 28->202|2fug21|3.7e-50|45.7|175/0|c.47.1.21|1/1|Thioredoxin-like| OP:NHOMO 1008 OP:NHOMOORG 718 OP:PATTERN -----------------------------1----1---------1--1----------1-1------- 11211---------11111-11--12111111111111111111-1--1-----------11111111211----------1-11111--1--1-----1-11--21111--------------1-----1---1-22222444111111111--11------11--11--------------11111331--------------------------------------------------------------1---------------------------------------------------------------------144-1111111111121------2-2112--23113436331211121--3--111111111232221133333311111111111-33233433121122223332223322111222333322311111111322-22111111111111111111111111111111111221-22212122122222221122222222113223311111321112112222221222121111111113112131-2-1--3-----343243265111111641--1---------------------11112---2-----------------1----21--221111111111111111111111111-1111111111111111111111111111111111111111111111111111-1111111-1-1111111111111114-111---------------11111111111-1111221122222-1111111111111--------------111111111111111111111111------------------------------------3223333233221 ----111-211-11111111111111-111111111111111111111111111111111-1111----1--111------11111---12111111111111112-111211111111111111113-3B1-3121-1111131111111111-11111111111221251111111171111121321111121111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 141 STR:RPRED 57.6 SQ:SECSTR ####################################HHHHTTccTTGGGHHHHHHHHHHHHccccHHHHHHHHHHHTccHHHHHHHHTTcccccccccccccEEccccHHHHTTTHHHHHHHHHHHHccccccccccccccccccccccccTTccccEEGGGccccccccHHHHHHH#################################################################### DISOP:02AL 1-25, 242-245| PSIPRED ccccccccccccEEcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccccccEEEEccEEEccccHHHHHHHHHHHHccccccccccccccccccHHHHHHccccccccccccccccHHHHHHHHHHHcccccccccccccc //